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The map label for this gene is pinE [C]

Identifier: 209551803

GI number: 209551803

Start: 4409167

End: 4409817

Strand: Reverse

Name: pinE [C]

Synonym: Rleg2_4233

Alternate gene names: 209551803

Gene position: 4409817-4409167 (Counterclockwise)

Preceding gene: 209551804

Following gene: 209551801

Centisome position: 97.18

GC content: 57.91

Gene sequence:

>651_bases
ATGCAGTATGTCATTTACACGCGCGTCAGCACTGAAGACCAAGGCAAGAGCGGCTTGGGCCTCGAAGCGCAGCAACGCGA
CATTGATATCTTCCTCGCCAACTTCTCCGAGGTGCCTTACGAGATCCTTGGGCAGTTCCAAGACGTCCTGTCGGGAAGCG
ACAACGAAAGGCCTGAACTATTGAAGGCGCTTGCCCTGGCACGCAAGACGGGCGCCGAGCTTCTGGTGGCTAAGCTCGAC
CGCCTAAGCCGCAAGGTTTCGTTCATTGCCTCGCTCATGGATGACAAGAAGGTAAAGCTTAGGGTCGCTCAGATGCCAAT
GGCTGACAAATTCCAACTCCACATCTATGCAGCGCTGGCTGAGCAAGAGCGCACCTTCATCAGCGAGCGCACCAAAGCAG
CCCTACGCGCGGCGAAAAACCGAGGCGTTAAGCTTGGCGGATTGCGTGACGCCACGATGAAGCGCAACGTCGCTATTCAG
GAGAGGGCCAACGGGGAGGCGCAACGCCTAATCAAGGTCATTGGTCCCCTGCGTCAGGCCGGACAGTCGCTGGCCAAAAT
CGCGGAAACGCTGAACGATATGGCAATCGCTGCGCCGAGGGGCGGGACGTGGTCCGCAATACAGGTATCCCGCGTCATTG
ACAGAGCTTGA

Upstream 100 bases:

>100_bases
CAGCAGCCATGGTGAACTGTATTCATAACATGCACAACGTCCGTTGACGTTTGTAAAGCAAGCCGGTATGGCTTCGTTAC
ATGCACAACGGGGACCGGCA

Downstream 100 bases:

>100_bases
AGTCTTCTCAGGACTGCCACCAGACAATGAGGCGAGCTGCCGGGGAGCCGCGTAAGCCGCACTATTGCTGATTGATCGCG
CCGACGAGCGCCTTCCACGG

Product: Resolvase domain

Products: NA

Alternate protein names: Resolvase Domain Protein; Site-Specific Recombinase; Resolvase; Resolvase-Like Protein; Resolvase-Like Serine Recombinase; Resolvase Family Protein; Resolvase Domain; DNA Recombinase; Recombinase; DNA Invertase; Site-Specific DNA Recombinase; Site-Specific Recombinase For Integration And Excision; Resolvase Family Site-Specific Recombinase; DNA-Invertase Lambdoid Prophage E; Resolvase N-Terminal; Phage Resolvase/Recombinase For Integration And Excision; Y4cG Protein; Phage DNA-Invertase; DNA-Invertase; Resolvase N Terminal Domain Family; Serine Recombinase

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MQYVIYTRVSTEDQGKSGLGLEAQQRDIDIFLANFSEVPYEILGQFQDVLSGSDNERPELLKALALARKTGAELLVAKLD
RLSRKVSFIASLMDDKKVKLRVAQMPMADKFQLHIYAALAEQERTFISERTKAALRAAKNRGVKLGGLRDATMKRNVAIQ
ERANGEAQRLIKVIGPLRQAGQSLAKIAETLNDMAIAAPRGGTWSAIQVSRVIDRA

Sequences:

>Translated_216_residues
MQYVIYTRVSTEDQGKSGLGLEAQQRDIDIFLANFSEVPYEILGQFQDVLSGSDNERPELLKALALARKTGAELLVAKLD
RLSRKVSFIASLMDDKKVKLRVAQMPMADKFQLHIYAALAEQERTFISERTKAALRAAKNRGVKLGGLRDATMKRNVAIQ
ERANGEAQRLIKVIGPLRQAGQSLAKIAETLNDMAIAAPRGGTWSAIQVSRVIDRA
>Mature_216_residues
MQYVIYTRVSTEDQGKSGLGLEAQQRDIDIFLANFSEVPYEILGQFQDVLSGSDNERPELLKALALARKTGAELLVAKLD
RLSRKVSFIASLMDDKKVKLRVAQMPMADKFQLHIYAALAEQERTFISERTKAALRAAKNRGVKLGGLRDATMKRNVAIQ
ERANGEAQRLIKVIGPLRQAGQSLAKIAETLNDMAIAAPRGGTWSAIQVSRVIDRA

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787404, Length=153, Percent_Identity=33.9869281045752, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23881; Mature: 23881

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYVIYTRVSTEDQGKSGLGLEAQQRDIDIFLANFSEVPYEILGQFQDVLSGSDNERPEL
CCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHH
LKALALARKTGAELLVAKLDRLSRKVSFIASLMDDKKVKLRVAQMPMADKFQLHIYAALA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHH
EQERTFISERTKAALRAAKNRGVKLGGLRDATMKRNVAIQERANGEAQRLIKVIGPLRQA
HHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH
GQSLAKIAETLNDMAIAAPRGGTWSAIQVSRVIDRA
HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQYVIYTRVSTEDQGKSGLGLEAQQRDIDIFLANFSEVPYEILGQFQDVLSGSDNERPEL
CCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHH
LKALALARKTGAELLVAKLDRLSRKVSFIASLMDDKKVKLRVAQMPMADKFQLHIYAALA
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHH
EQERTFISERTKAALRAAKNRGVKLGGLRDATMKRNVAIQERANGEAQRLIKVIGPLRQA
HHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHCCHHHHHCCCHHHHHHHHHHHHHHH
GQSLAKIAETLNDMAIAAPRGGTWSAIQVSRVIDRA
HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA