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The map label for this gene is rfbF [H]

Identifier: 209551790

GI number: 209551790

Start: 4396828

End: 4397601

Strand: Reverse

Name: rfbF [H]

Synonym: Rleg2_4219

Alternate gene names: 209551790

Gene position: 4397601-4396828 (Counterclockwise)

Preceding gene: 209551792

Following gene: 209551789

Centisome position: 96.91

GC content: 59.17

Gene sequence:

>774_bases
ATGAAAGTCGTAATTCTCGCCGGTGGTCTCGGATCGCGCCTTGCCGAAGAGACCAGCGTGCGGCCTAAGCCTCTGGTCGA
AATCGGCGGCATGCCGATCCTCTGGCACATCATGAATATCTATGCCCATCACGGCTTTGATGATTTCATCATCTGCGCCG
GCTATAAGGGCTATATGATCAAGGAATATTTCGTAAACCTTGTTCTCCACCACAGCGACATCACCGTCGATCTCGGCGCC
AACAGTATCAACTATCACGGCGGCAAACGGCCGAACTGGCGCGTGACCGTGGTCGATACCGGCATGCATTCGATGACGGG
CGGCCGTCTCGGGCGCATTCGCGACCATCTGACACCAGGTGAACCTTTCTGCATGACGTATGGCGACGGCGTCGGCGACA
TCGACATTGCCGCCGAAGTCGCCTTCCATCGCGATCACGGCCTGAAGGCGACAATGTGCGCGGTGACCCCGCCCGGACGT
TACGGCGCCACGAATATCGAAGGCCAGTACATCACCTCCTTCGTGGAGAAACCGAGAGGCGACGGCCAGCGTATTAATGG
CGGCTTCTTCGTGCTCGACCCTTCCGTGGTCGATCTCATCCCAAGCGACGACACGATCTGGGAAGCCGGGCCGCTGGAGT
GGCTTGCCGCCAACAACCAGCTTGCCGCCTTCAAGCATGACGGCTTCTGGCAGCCGATGGATACGCTGCGCGAGCGCACC
CATCTGGAAGAGCTCTGGAATTCCGGAAAGGCGCCGTGGAAGCTATGGGCCTGA

Upstream 100 bases:

>100_bases
TACGGCCGTTCCACCTGTGAGTGCCCCCGCATGCCGGGCGGCCTCGCCGGCGCCGGCCGCAGACAATAATCGCTTCCAAA
GACGCTGGAGTTCGCTTGGG

Downstream 100 bases:

>100_bases
CGGACTTCTGGAAAGGGCGGCGGGTTTTCCTCACCGGGCACACCGGCTTCAAGGGTTCCTGGCTTTCGCTGTGGCTGGAG
CGGCTCGGCGCAGAGGTCAC

Product: glucose-1-phosphate cytidylyltransferase

Products: NA

Alternate protein names: CDP-glucose pyrophosphorylase [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKVVILAGGLGSRLAEETSVRPKPLVEIGGMPILWHIMNIYAHHGFDDFIICAGYKGYMIKEYFVNLVLHHSDITVDLGA
NSINYHGGKRPNWRVTVVDTGMHSMTGGRLGRIRDHLTPGEPFCMTYGDGVGDIDIAAEVAFHRDHGLKATMCAVTPPGR
YGATNIEGQYITSFVEKPRGDGQRINGGFFVLDPSVVDLIPSDDTIWEAGPLEWLAANNQLAAFKHDGFWQPMDTLRERT
HLEELWNSGKAPWKLWA

Sequences:

>Translated_257_residues
MKVVILAGGLGSRLAEETSVRPKPLVEIGGMPILWHIMNIYAHHGFDDFIICAGYKGYMIKEYFVNLVLHHSDITVDLGA
NSINYHGGKRPNWRVTVVDTGMHSMTGGRLGRIRDHLTPGEPFCMTYGDGVGDIDIAAEVAFHRDHGLKATMCAVTPPGR
YGATNIEGQYITSFVEKPRGDGQRINGGFFVLDPSVVDLIPSDDTIWEAGPLEWLAANNQLAAFKHDGFWQPMDTLRERT
HLEELWNSGKAPWKLWA
>Mature_257_residues
MKVVILAGGLGSRLAEETSVRPKPLVEIGGMPILWHIMNIYAHHGFDDFIICAGYKGYMIKEYFVNLVLHHSDITVDLGA
NSINYHGGKRPNWRVTVVDTGMHSMTGGRLGRIRDHLTPGEPFCMTYGDGVGDIDIAAEVAFHRDHGLKATMCAVTPPGR
YGATNIEGQYITSFVEKPRGDGQRINGGFFVLDPSVVDLIPSDDTIWEAGPLEWLAANNQLAAFKHDGFWQPMDTLRERT
HLEELWNSGKAPWKLWA

Specific function: Involved in the biosynthesis of the tyvelose, a 3,6- dideoxyhexose found in the O-antigen of the surface lipopolysaccharides. It catalyzes the transfer of a CMP moiety from CTP to glucose 1-phosphate. This enzyme can utilize either CTP or UTP as the nucle

COG id: COG1208

COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glucose-1-phosphate cytidylyltransferase family [H]

Homologues:

Organism=Caenorhabditis elegans, GI133931050, Length=246, Percent_Identity=29.6747967479675, Blast_Score=100, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013446
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.33 [H]

Molecular weight: Translated: 28557; Mature: 28557

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVILAGGLGSRLAEETSVRPKPLVEIGGMPILWHIMNIYAHHGFDDFIICAGYKGYMI
CEEEEEECCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHH
KEYFVNLVLHHSDITVDLGANSINYHGGKRPNWRVTVVDTGMHSMTGGRLGRIRDHLTPG
HHHHHEEEEECCCEEEEECCCEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCC
EPFCMTYGDGVGDIDIAAEVAFHRDHGLKATMCAVTPPGRYGATNIEGQYITSFVEKPRG
CCEEEEECCCCCCEEHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCC
DGQRINGGFFVLDPSVVDLIPSDDTIWEAGPLEWLAANNQLAAFKHDGFWQPMDTLRERT
CCCEECCCEEEECCCEEEEECCCCCEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHH
HLEELWNSGKAPWKLWA
HHHHHHHCCCCCEEECC
>Mature Secondary Structure
MKVVILAGGLGSRLAEETSVRPKPLVEIGGMPILWHIMNIYAHHGFDDFIICAGYKGYMI
CEEEEEECCCCHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHH
KEYFVNLVLHHSDITVDLGANSINYHGGKRPNWRVTVVDTGMHSMTGGRLGRIRDHLTPG
HHHHHEEEEECCCEEEEECCCEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCC
EPFCMTYGDGVGDIDIAAEVAFHRDHGLKATMCAVTPPGRYGATNIEGQYITSFVEKPRG
CCEEEEECCCCCCEEHEEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCC
DGQRINGGFFVLDPSVVDLIPSDDTIWEAGPLEWLAANNQLAAFKHDGFWQPMDTLRERT
CCCEECCCEEEECCCEEEEECCCCCEECCCCEEEEECCCEEEEEECCCCCCCHHHHHHHH
HLEELWNSGKAPWKLWA
HHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]