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The map label for this gene is parA [H]

Identifier: 209551732

GI number: 209551732

Start: 4338381

End: 4339001

Strand: Direct

Name: parA [H]

Synonym: Rleg2_4161

Alternate gene names: 209551732

Gene position: 4338381-4339001 (Clockwise)

Preceding gene: 209551731

Following gene: 209551733

Centisome position: 95.6

GC content: 59.26

Gene sequence:

>621_bases
ATGGACACACGCCTTTACCTTCGCGCATCGACCTCTGAGCAGGATGCATCCCGAGCAGAAAGTGAGCTGCGGAAGTTCGC
AGATGAGCGCGGCTTGAAGATCGTTGGCACCTACATCGAAAACCAGTCCGGCGCGAAGCTCGCCCGGCCAGAGCTGTTCC
GCTTGCTGCGTGACAGCCACGCCGGAGATATCATGCTGATCGAGCAGGTCGATCGCCTGTCGCGCCTGGCAACGGATGAT
TGGGCTAAACTGAAAACCGAGATCGATCGACGGGGCGTGCGCGTGGTCAGCCTGGATCTTCCGACGAGCCACCAGGCAAT
CGCAGCTGACGAATTCACCAGCCGTATGTATTCCGCGCTCAATGGGATGATGCTGGACGTGCTCGCTGCTGTCGCTGCCA
AAGACTATAGCGATCGCCGGCGAAGGCAAGCGCAGGGCATTGAGAAGGCCAAGCAGGCCGGTCGGTATAACGGGCGCCCG
GAAGACAAAAAGCGCAACGAAGCCATTCTCAAGATGCTTTCGGCCGGTCAGAGCTGGTCAAACATCATCGCAGCAACGGG
CTGCTCAAGATCAACGCTCAGCCGGTTGGCGCGGCGAAGAAATGAAGGGGCGGGCAAATGA

Upstream 100 bases:

>100_bases
CACCTTAAGAGAACTAATAAATTCGGGTTCGCTTCGGGGCTCTTTCGGGCTCCAAAGCGAACCGATTTCGTATCACCACC
CAAATCGAACCGGGGCAATA

Downstream 100 bases:

>100_bases
AGCTCATCACCGAGCAAGAGGCGAGCGAGATCCTGCGATGCAGCGCAGAAAAAATCAAAAGGCTGCGGCTGTCTGGCAGG
CTCGCTTATATTCCAGGCCG

Product: Resolvase domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDTRLYLRASTSEQDASRAESELRKFADERGLKIVGTYIENQSGAKLARPELFRLLRDSHAGDIMLIEQVDRLSRLATDD
WAKLKTEIDRRGVRVVSLDLPTSHQAIAADEFTSRMYSALNGMMLDVLAAVAAKDYSDRRRRQAQGIEKAKQAGRYNGRP
EDKKRNEAILKMLSAGQSWSNIIAATGCSRSTLSRLARRRNEGAGK

Sequences:

>Translated_206_residues
MDTRLYLRASTSEQDASRAESELRKFADERGLKIVGTYIENQSGAKLARPELFRLLRDSHAGDIMLIEQVDRLSRLATDD
WAKLKTEIDRRGVRVVSLDLPTSHQAIAADEFTSRMYSALNGMMLDVLAAVAAKDYSDRRRRQAQGIEKAKQAGRYNGRP
EDKKRNEAILKMLSAGQSWSNIIAATGCSRSTLSRLARRRNEGAGK
>Mature_206_residues
MDTRLYLRASTSEQDASRAESELRKFADERGLKIVGTYIENQSGAKLARPELFRLLRDSHAGDIMLIEQVDRLSRLATDD
WAKLKTEIDRRGVRVVSLDLPTSHQAIAADEFTSRMYSALNGMMLDVLAAVAAKDYSDRRRRQAQGIEKAKQAGRYNGRP
EDKKRNEAILKMLSAGQSWSNIIAATGCSRSTLSRLARRRNEGAGK

Specific function: Involved in plasmid partition [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 23086; Mature: 23086

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRLYLRASTSEQDASRAESELRKFADERGLKIVGTYIENQSGAKLARPELFRLLRDSH
CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHCC
AGDIMLIEQVDRLSRLATDDWAKLKTEIDRRGVRVVSLDLPTSHQAIAADEFTSRMYSAL
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
NGMMLDVLAAVAAKDYSDRRRRQAQGIEKAKQAGRYNGRPEDKKRNEAILKMLSAGQSWS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHH
NIIAATGCSRSTLSRLARRRNEGAGK
HHHHHCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDTRLYLRASTSEQDASRAESELRKFADERGLKIVGTYIENQSGAKLARPELFRLLRDSH
CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCHHHHHHHHHHHHCC
AGDIMLIEQVDRLSRLATDDWAKLKTEIDRRGVRVVSLDLPTSHQAIAADEFTSRMYSAL
CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
NGMMLDVLAAVAAKDYSDRRRRQAQGIEKAKQAGRYNGRPEDKKRNEAILKMLSAGQSWS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHH
NIIAATGCSRSTLSRLARRRNEGAGK
HHHHHCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2172207 [H]