Definition Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession NC_011369
Length 4,537,948

Click here to switch to the map view.

The map label for this gene is yejE [H]

Identifier: 209551705

GI number: 209551705

Start: 4315113

End: 4316261

Strand: Direct

Name: yejE [H]

Synonym: Rleg2_4134

Alternate gene names: 209551705

Gene position: 4315113-4316261 (Clockwise)

Preceding gene: 209551704

Following gene: 209551706

Centisome position: 95.09

GC content: 62.14

Gene sequence:

>1149_bases
ATGGACGCCGCCGCAAATCCTGCTGTCGCAGCACCCGTCAAGCCGCCGCGCAAGGGCCTGCTGTCACCGACCAACATCCG
CCGCTGGCAGAATTTCCGGGCGAACGGCCGCGGTTACTGGTCGCTGTGGCTGTTCCTGCTGCTGTTCATCCTCAGCCTGT
TTGCCGAATTCCTCGCCAACGACCGGCCGATCATCGCCTCCTACAAGGGCGAGATCCTGTTTCCCGTTCTGGTCGACTAT
CCAGAGGACAAGTTCGGCGGCTTTCTTGCCGAGACCGACTACCGATCTTCGGTGATTGCAGACGAGATCAATGCCAATGG
CTGGATGGTCTGGCCGCCGATCCGCTATTCCTACCGCTCGGTCAACTCCAACATTCCGCATTCGGCGCCGACCGCCCCCT
TCTGGCTGATGAGCAAGGAGGAGCGGTGCTCCGGTTATCCTGAAGGAGCGAACGATCCTGCCTGCACGCTCGGCAATCTC
AACTGGCTCGGCACCGACGACCAAGCCCGCGACGTGCTGGCGCGCGTCATTTACGGTTTCCGCATATCGGTGCTCTTCGG
CCTGGCTCTGACCATCTGCTCGGCGATCATAGGCGTGACGGCAGGCGCCGTGCAGGGCTATTTCGGCGGCTGGACCGATC
TCTTGCTGCAGCGCTTCATCGAGATCTGGTCGTCGATGCCGGTGCTTTACATCCTGCTCATCATCGCCGCCATTCTGCCG
CCCGGCTTCTTCGTGCTGCTCGGCATCATGCTGCTCTTTTCCTGGGTCGGCTTCGTCGGCATCGTGCGTGCCGAATTCCT
GCGCGCCCGCAATTTCGAATATGTCCGCGCCGCCCGCGCGCTCGGCGTCAACAACCGCACCATCATGTGGCGCCACATGC
TGCCGAACGCCATGGTGGCGACGCTGACCTTCCTGCCCTTCATCCTCTCCGGATCGATCACGACGCTGACGTCGCTGGAT
TTCCTCGGCTTCGGCATGCCGCCTGGCTCCCCTTCGCTCGGCGAGATGATCGCCCAGGGCAAAAGCAACCTGCAGGCGCC
ATGGCTCGGGCTGACGGCCTTCTTCGCCATGTCGATCATGCTGTCCCTGCTGATCTTCATCGGCGAAGCCGTGCGCGATG
CCTTCGATCCGAGGAAGACGTTTCAATGA

Upstream 100 bases:

>100_bases
TCTATATCTTCTCGCTGCTCGGCCTCGTCGTCAGCCTGGTTTCCGACCTGATCTACACCTGGATCGATCCGCGCATCGAT
TTCGAGCGGAGGGATGTCTG

Downstream 100 bases:

>100_bases
GTGACATGACAGAACCGCTCCTTTCCGTCCGCGATCTCTCGGTTGCCTTTCATCAGGGCGGCGCGACCTCGCTTGCCGTC
GATCGCATCTCCTTCGATAT

Product: binding-protein-dependent transporters inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLANDRPIIASYKGEILFPVLVDY
PEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRSVNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNL
NWLGTDDQARDVLARVIYGFRISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP
PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVATLTFLPFILSGSITTLTSLD
FLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFIGEAVRDAFDPRKTFQ

Sequences:

>Translated_382_residues
MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLANDRPIIASYKGEILFPVLVDY
PEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRSVNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNL
NWLGTDDQARDVLARVIYGFRISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP
PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVATLTFLPFILSGSITTLTSLD
FLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFIGEAVRDAFDPRKTFQ
>Mature_382_residues
MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLANDRPIIASYKGEILFPVLVDY
PEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRSVNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNL
NWLGTDDQARDVLARVIYGFRISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP
PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVATLTFLPFILSGSITTLTSLD
FLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFIGEAVRDAFDPRKTFQ

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4239

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=360, Percent_Identity=56.9444444444444, Blast_Score=407, Evalue=1e-115,
Organism=Escherichia coli, GI1787054, Length=241, Percent_Identity=29.4605809128631, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1787760, Length=220, Percent_Identity=28.6363636363636, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=29.0909090909091, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1789964, Length=218, Percent_Identity=33.4862385321101, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787549, Length=223, Percent_Identity=29.1479820627803, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789889, Length=225, Percent_Identity=24, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 42430; Mature: 42430

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLAN
CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
DRPIIASYKGEILFPVLVDYPEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRS
CCCEEEECCCCEEEEEEECCCCHHHCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHH
VNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNLNWLGTDDQARDVLARVIYGF
HCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
RISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHCCHHHHH
TLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIM
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LSLLIFIGEAVRDAFDPRKTFQ
HHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLAN
CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
DRPIIASYKGEILFPVLVDYPEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRS
CCCEEEECCCCEEEEEEECCCCHHHCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHH
VNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNLNWLGTDDQARDVLARVIYGF
HCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH
RISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHCCHHHHH
TLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIM
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LSLLIFIGEAVRDAFDPRKTFQ
HHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]