| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is yejE [H]
Identifier: 209551705
GI number: 209551705
Start: 4315113
End: 4316261
Strand: Direct
Name: yejE [H]
Synonym: Rleg2_4134
Alternate gene names: 209551705
Gene position: 4315113-4316261 (Clockwise)
Preceding gene: 209551704
Following gene: 209551706
Centisome position: 95.09
GC content: 62.14
Gene sequence:
>1149_bases ATGGACGCCGCCGCAAATCCTGCTGTCGCAGCACCCGTCAAGCCGCCGCGCAAGGGCCTGCTGTCACCGACCAACATCCG CCGCTGGCAGAATTTCCGGGCGAACGGCCGCGGTTACTGGTCGCTGTGGCTGTTCCTGCTGCTGTTCATCCTCAGCCTGT TTGCCGAATTCCTCGCCAACGACCGGCCGATCATCGCCTCCTACAAGGGCGAGATCCTGTTTCCCGTTCTGGTCGACTAT CCAGAGGACAAGTTCGGCGGCTTTCTTGCCGAGACCGACTACCGATCTTCGGTGATTGCAGACGAGATCAATGCCAATGG CTGGATGGTCTGGCCGCCGATCCGCTATTCCTACCGCTCGGTCAACTCCAACATTCCGCATTCGGCGCCGACCGCCCCCT TCTGGCTGATGAGCAAGGAGGAGCGGTGCTCCGGTTATCCTGAAGGAGCGAACGATCCTGCCTGCACGCTCGGCAATCTC AACTGGCTCGGCACCGACGACCAAGCCCGCGACGTGCTGGCGCGCGTCATTTACGGTTTCCGCATATCGGTGCTCTTCGG CCTGGCTCTGACCATCTGCTCGGCGATCATAGGCGTGACGGCAGGCGCCGTGCAGGGCTATTTCGGCGGCTGGACCGATC TCTTGCTGCAGCGCTTCATCGAGATCTGGTCGTCGATGCCGGTGCTTTACATCCTGCTCATCATCGCCGCCATTCTGCCG CCCGGCTTCTTCGTGCTGCTCGGCATCATGCTGCTCTTTTCCTGGGTCGGCTTCGTCGGCATCGTGCGTGCCGAATTCCT GCGCGCCCGCAATTTCGAATATGTCCGCGCCGCCCGCGCGCTCGGCGTCAACAACCGCACCATCATGTGGCGCCACATGC TGCCGAACGCCATGGTGGCGACGCTGACCTTCCTGCCCTTCATCCTCTCCGGATCGATCACGACGCTGACGTCGCTGGAT TTCCTCGGCTTCGGCATGCCGCCTGGCTCCCCTTCGCTCGGCGAGATGATCGCCCAGGGCAAAAGCAACCTGCAGGCGCC ATGGCTCGGGCTGACGGCCTTCTTCGCCATGTCGATCATGCTGTCCCTGCTGATCTTCATCGGCGAAGCCGTGCGCGATG CCTTCGATCCGAGGAAGACGTTTCAATGA
Upstream 100 bases:
>100_bases TCTATATCTTCTCGCTGCTCGGCCTCGTCGTCAGCCTGGTTTCCGACCTGATCTACACCTGGATCGATCCGCGCATCGAT TTCGAGCGGAGGGATGTCTG
Downstream 100 bases:
>100_bases GTGACATGACAGAACCGCTCCTTTCCGTCCGCGATCTCTCGGTTGCCTTTCATCAGGGCGGCGCGACCTCGCTTGCCGTC GATCGCATCTCCTTCGATAT
Product: binding-protein-dependent transporters inner membrane component
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLANDRPIIASYKGEILFPVLVDY PEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRSVNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNL NWLGTDDQARDVLARVIYGFRISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVATLTFLPFILSGSITTLTSLD FLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFIGEAVRDAFDPRKTFQ
Sequences:
>Translated_382_residues MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLANDRPIIASYKGEILFPVLVDY PEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRSVNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNL NWLGTDDQARDVLARVIYGFRISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVATLTFLPFILSGSITTLTSLD FLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFIGEAVRDAFDPRKTFQ >Mature_382_residues MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLANDRPIIASYKGEILFPVLVDY PEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRSVNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNL NWLGTDDQARDVLARVIYGFRISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVATLTFLPFILSGSITTLTSLD FLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIMLSLLIFIGEAVRDAFDPRKTFQ
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4239
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788505, Length=360, Percent_Identity=56.9444444444444, Blast_Score=407, Evalue=1e-115, Organism=Escherichia coli, GI1787054, Length=241, Percent_Identity=29.4605809128631, Blast_Score=118, Evalue=7e-28, Organism=Escherichia coli, GI1787760, Length=220, Percent_Identity=28.6363636363636, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=29.0909090909091, Blast_Score=98, Evalue=7e-22, Organism=Escherichia coli, GI1789964, Length=218, Percent_Identity=33.4862385321101, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787549, Length=223, Percent_Identity=29.1479820627803, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1789889, Length=225, Percent_Identity=24, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 42430; Mature: 42430
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLAN CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC DRPIIASYKGEILFPVLVDYPEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRS CCCEEEECCCCEEEEEEECCCCHHHCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHH VNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNLNWLGTDDQARDVLARVIYGF HCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH RISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHCCHHHHH TLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIM HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LSLLIFIGEAVRDAFDPRKTFQ HHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MDAAANPAVAAPVKPPRKGLLSPTNIRRWQNFRANGRGYWSLWLFLLLFILSLFAEFLAN CCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC DRPIIASYKGEILFPVLVDYPEDKFGGFLAETDYRSSVIADEINANGWMVWPPIRYSYRS CCCEEEECCCCEEEEEEECCCCHHHCCEEECCCHHHHHHHHHCCCCCEEECCCHHHHHHH VNSNIPHSAPTAPFWLMSKEERCSGYPEGANDPACTLGNLNWLGTDDQARDVLARVIYGF HCCCCCCCCCCCCEEECCCHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH RISVLFGLALTICSAIIGVTAGAVQGYFGGWTDLLLQRFIEIWSSMPVLYILLIIAAILP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC PGFFVLLGIMLLFSWVGFVGIVRAEFLRARNFEYVRAARALGVNNRTIMWRHMLPNAMVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHCCHHHHH TLTFLPFILSGSITTLTSLDFLGFGMPPGSPSLGEMIAQGKSNLQAPWLGLTAFFAMSIM HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHH LSLLIFIGEAVRDAFDPRKTFQ HHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]