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The map label for this gene is cycM [H]

Identifier: 209551656

GI number: 209551656

Start: 4259532

End: 4260098

Strand: Direct

Name: cycM [H]

Synonym: Rleg2_4085

Alternate gene names: 209551656

Gene position: 4259532-4260098 (Clockwise)

Preceding gene: 209551653

Following gene: 209551658

Centisome position: 93.86

GC content: 59.96

Gene sequence:

>567_bases
ATGAATTCATACGTCAATACGGCCGTGGGGGCACTGCTCGGAACGATTTTCGTTCTGATGTCGGTCTCTATCGCGTCCGA
AGGGATCTTCCATTCCGAAGCACCGGAAAAGGAAGGTTTCGCGATCGTTGCCGAAGAGGCGCCCGCCGCTGGTGGCGAAG
CTGCGCCTGCCGCTGCTGCCGTTCCCATCGCGCAATTGCTCGCTTCTGCCGATGCCAAGGCCGGTGAAACGGTCTTCAAG
AAGTGTCAGGCCTGTCATGACGGCACCAAAGGGGGACCGAACAAGGTCGGTCCCAACCTCTTTGGTGTCGTAGATCGCCC
GATCGCCTCGCATGAGGGCTTTGGCTATTCCGCCGCCATGAAGGATTTCTCCAAGGGCAGCAGCGAGAAGTGGACCTTCG
AATTCCTCAACAAATTCCTGATGGCGCCGAAGAAGGACGTTCCCGGCACTGCCATGGGCTTTGCCGGTCTGGCGAAAGAT
CAGGACCGCGCCAACGTCATCCTCTACCTGCACACGCTCGCCGATTCGCCGGTGCCGCTGCCGGACCCGAAGACCGCGAC
GCAGTGA

Upstream 100 bases:

>100_bases
ACCATTTAGACAGTTGCAACGATCAGCCAAAAGACATAGGTTCCGCGCGATTTCAAGATGGTCCGGTTATGGTCTGCCGG
CTGCAAGGGGAGCATTGCAG

Downstream 100 bases:

>100_bases
CGCGGACGGAATGATCGCATCTCATGAAAGCCCGGCCCGCGAAGCCGGGCTTTTTGCTGTGCGGAAGGACGTTTAAAGCA
TGTCGCGTAAAAGTGTAGAG

Product: cytochrome C class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNSYVNTAVGALLGTIFVLMSVSIASEGIFHSEAPEKEGFAIVAEEAPAAGGEAAPAAAAVPIAQLLASADAKAGETVFK
KCQACHDGTKGGPNKVGPNLFGVVDRPIASHEGFGYSAAMKDFSKGSSEKWTFEFLNKFLMAPKKDVPGTAMGFAGLAKD
QDRANVILYLHTLADSPVPLPDPKTATQ

Sequences:

>Translated_188_residues
MNSYVNTAVGALLGTIFVLMSVSIASEGIFHSEAPEKEGFAIVAEEAPAAGGEAAPAAAAVPIAQLLASADAKAGETVFK
KCQACHDGTKGGPNKVGPNLFGVVDRPIASHEGFGYSAAMKDFSKGSSEKWTFEFLNKFLMAPKKDVPGTAMGFAGLAKD
QDRANVILYLHTLADSPVPLPDPKTATQ
>Mature_188_residues
MNSYVNTAVGALLGTIFVLMSVSIASEGIFHSEAPEKEGFAIVAEEAPAAGGEAAPAAAAVPIAQLLASADAKAGETVFK
KCQACHDGTKGGPNKVGPNLFGVVDRPIASHEGFGYSAAMKDFSKGSSEKWTFEFLNKFLMAPKKDVPGTAMGFAGLAKD
QDRANVILYLHTLADSPVPLPDPKTATQ

Specific function: May be involved in electron transfer from bc1 complex to aa3 [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=102, Percent_Identity=41.1764705882353, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17539604, Length=107, Percent_Identity=42.9906542056075, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17566554, Length=109, Percent_Identity=38.5321100917431, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320796, Length=100, Percent_Identity=44, Blast_Score=91, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6322508, Length=105, Percent_Identity=40.9523809523809, Blast_Score=84, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17137204, Length=107, Percent_Identity=42.9906542056075, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17137228, Length=105, Percent_Identity=38.0952380952381, Blast_Score=76, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 19483; Mature: 19483

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSYVNTAVGALLGTIFVLMSVSIASEGIFHSEAPEKEGFAIVAEEAPAAGGEAAPAAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHH
VPIAQLLASADAKAGETVFKKCQACHDGTKGGPNKVGPNLFGVVDRPIASHEGFGYSAAM
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHH
KDFSKGSSEKWTFEFLNKFLMAPKKDVPGTAMGFAGLAKDQDRANVILYLHTLADSPVPL
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCCCCCC
PDPKTATQ
CCCCCCCC
>Mature Secondary Structure
MNSYVNTAVGALLGTIFVLMSVSIASEGIFHSEAPEKEGFAIVAEEAPAAGGEAAPAAAA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHH
VPIAQLLASADAKAGETVFKKCQACHDGTKGGPNKVGPNLFGVVDRPIASHEGFGYSAAM
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHH
KDFSKGSSEKWTFEFLNKFLMAPKKDVPGTAMGFAGLAKDQDRANVILYLHTLADSPVPL
HHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEEECCCCCCCC
PDPKTATQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]