| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551621
Identifier: 209551621
GI number: 209551621
Start: 4226334
End: 4227560
Strand: Reverse
Name: 209551621
Synonym: Rleg2_4050
Alternate gene names: NA
Gene position: 4227560-4226334 (Counterclockwise)
Preceding gene: 209551624
Following gene: 209551620
Centisome position: 93.16
GC content: 61.45
Gene sequence:
>1227_bases ATGGCAAAGCGTAGCGTGGCTCTTTTTCTTCTACTTCTTCTGGCAAGTTGCGGGCATCCGGGCGGCGTGATGACGCCAGT TTCAGCCTCATTGTCTTCATCGTCGATAACGCCGACCTCCACGGTCGACATGCTGGTTGCGACCACGCGCGAGCCTTCCG GGAACCCGGCGACGCTCTTCAACGGCGAGCGCAGTTCCAAGCCGCATCTGACGCAGATCTCGATTTCGATCCCGGCAAAG CGCGAAGCCGGCACCGTGCAGTGGCCGAAGCGGCTTCCGCCCGATCCGGCCACCGACTTTGCCGTCACCCGTGTTCAGCA GATCGACACCGTGGCACAGGGCCGCGTCTGGTTCCGGCAGCATGTGCACGGCGGCCATGCGCTCGTCTTCATCCACGGCT TCAACAACACCTATGAGGATTCCGTCTTCCGGCTGGCGCAATTGGTGCACGACAGCAAGATGCAGGCGACGCCTGTCCTG TTCACCTGGCCGTCGAGAGCGGAGATCACGGCCTACCAATACGACAAGGAGAGTACGAATTATTCGCGGACGGCGCTGGA GCAGGCGCTCCGCACGCTGGCCGCCGACCCCGATGTCAAGGACATCACCGTCATGGCCCATTCGATGGGAACGTGGCTTG CCATGGAATCGCTGCGGCAGATGGGAATACGCGACGGTCACGTCATTTCGAAGATCCACAATGTCATCCTGGCCTCGCCC GATATCGACATCCAGGTCTTCGCCAAACAATATGTGGAGATGGGCGAGCCGCGTCCGAAATTCACGATCTTCGTTTCCCA GGACGACAAGGCTCTTGCGGTTTCGAGCTTCATCACCGGACGCGTTTCCCGTCTCGGCGCGATCAATCCGGCCGAGGAGC CCTACCGCTCGAAGCTGGAAAATGCCGGCATCACTGCCATCGACCTGACGAAGGTGAAGACCCACGACAGGCTCAATCAC GGCAAATTCGCCGAAAGTCCCGAGATCGTCCAACTCATCGGCCAGCGCCTCATGACTGGCCAGACCTTGACCGATTCCAA GGTCACGCTGGGTCAGGGCATTACGGCCGTCGTCGGCGGAACGGTATCGACGATCGGCACCGTTGCCGCGACCGCCGCCG CGGCGCCGGTTGCGATCATCGAACAGCCCGTCACGCGGAAGAAGCCGCCGCGAGCTGCCAACGAGACGCTCGACGGCGAC CTGAAGCAACAGACGCTGACACAGTGA
Upstream 100 bases:
>100_bases GAACGCCACAGATATTACGTGATGCTACAGGCGCCGGTATAGCCCGCCTGCTAGTATCCAGGGCTCGGAACGCCCTCTTG AGCGATTGCTGGATGCGTGA
Downstream 100 bases:
>100_bases GGAGTTTCAGGTTGAAATGGCTTCTTTCCTTCACCGCCGCTTTTCTCTTCGCGTTGAGTGCTTTGGCGCAGACGCCGCCG GTGGGCCAGCAGCAGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MAKRSVALFLLLLLASCGHPGGVMTPVSASLSSSSITPTSTVDMLVATTREPSGNPATLFNGERSSKPHLTQISISIPAK REAGTVQWPKRLPPDPATDFAVTRVQQIDTVAQGRVWFRQHVHGGHALVFIHGFNNTYEDSVFRLAQLVHDSKMQATPVL FTWPSRAEITAYQYDKESTNYSRTALEQALRTLAADPDVKDITVMAHSMGTWLAMESLRQMGIRDGHVISKIHNVILASP DIDIQVFAKQYVEMGEPRPKFTIFVSQDDKALAVSSFITGRVSRLGAINPAEEPYRSKLENAGITAIDLTKVKTHDRLNH GKFAESPEIVQLIGQRLMTGQTLTDSKVTLGQGITAVVGGTVSTIGTVAATAAAAPVAIIEQPVTRKKPPRAANETLDGD LKQQTLTQ
Sequences:
>Translated_408_residues MAKRSVALFLLLLLASCGHPGGVMTPVSASLSSSSITPTSTVDMLVATTREPSGNPATLFNGERSSKPHLTQISISIPAK REAGTVQWPKRLPPDPATDFAVTRVQQIDTVAQGRVWFRQHVHGGHALVFIHGFNNTYEDSVFRLAQLVHDSKMQATPVL FTWPSRAEITAYQYDKESTNYSRTALEQALRTLAADPDVKDITVMAHSMGTWLAMESLRQMGIRDGHVISKIHNVILASP DIDIQVFAKQYVEMGEPRPKFTIFVSQDDKALAVSSFITGRVSRLGAINPAEEPYRSKLENAGITAIDLTKVKTHDRLNH GKFAESPEIVQLIGQRLMTGQTLTDSKVTLGQGITAVVGGTVSTIGTVAATAAAAPVAIIEQPVTRKKPPRAANETLDGD LKQQTLTQ >Mature_407_residues AKRSVALFLLLLLASCGHPGGVMTPVSASLSSSSITPTSTVDMLVATTREPSGNPATLFNGERSSKPHLTQISISIPAKR EAGTVQWPKRLPPDPATDFAVTRVQQIDTVAQGRVWFRQHVHGGHALVFIHGFNNTYEDSVFRLAQLVHDSKMQATPVLF TWPSRAEITAYQYDKESTNYSRTALEQALRTLAADPDVKDITVMAHSMGTWLAMESLRQMGIRDGHVISKIHNVILASPD IDIQVFAKQYVEMGEPRPKFTIFVSQDDKALAVSSFITGRVSRLGAINPAEEPYRSKLENAGITAIDLTKVKTHDRLNHG KFAESPEIVQLIGQRLMTGQTLTDSKVTLGQGITAVVGGTVSTIGTVAATAAAAPVAIIEQPVTRKKPPRAANETLDGDL KQQTLTQ
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44250; Mature: 44119
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRSVALFLLLLLASCGHPGGVMTPVSASLSSSSITPTSTVDMLVATTREPSGNPATLF CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCEEE NGERSSKPHLTQISISIPAKREAGTVQWPKRLPPDPATDFAVTRVQQIDTVAQGRVWFRQ CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HVHGGHALVFIHGFNNTYEDSVFRLAQLVHDSKMQATPVLFTWPSRAEITAYQYDKESTN HCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCC YSRTALEQALRTLAADPDVKDITVMAHSMGTWLAMESLRQMGIRDGHVISKIHNVILASP HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCC DIDIQVFAKQYVEMGEPRPKFTIFVSQDDKALAVSSFITGRVSRLGAINPAEEPYRSKLE CCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHH NAGITAIDLTKVKTHDRLNHGKFAESPEIVQLIGQRLMTGQTLTDSKVTLGQGITAVVGG HCCCEEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHCC TVSTIGTVAATAAAAPVAIIEQPVTRKKPPRAANETLDGDLKQQTLTQ HHHHHHHHHHHHHHCCHHHHCCCHHCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure AKRSVALFLLLLLASCGHPGGVMTPVSASLSSSSITPTSTVDMLVATTREPSGNPATLF CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCCCEEE NGERSSKPHLTQISISIPAKREAGTVQWPKRLPPDPATDFAVTRVQQIDTVAQGRVWFRQ CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HVHGGHALVFIHGFNNTYEDSVFRLAQLVHDSKMQATPVLFTWPSRAEITAYQYDKESTN HCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCC YSRTALEQALRTLAADPDVKDITVMAHSMGTWLAMESLRQMGIRDGHVISKIHNVILASP HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECCC DIDIQVFAKQYVEMGEPRPKFTIFVSQDDKALAVSSFITGRVSRLGAINPAEEPYRSKLE CCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCHHHHHHHH NAGITAIDLTKVKTHDRLNHGKFAESPEIVQLIGQRLMTGQTLTDSKVTLGQGITAVVGG HCCCEEEEEEEEHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHCC TVSTIGTVAATAAAAPVAIIEQPVTRKKPPRAANETLDGDLKQQTLTQ HHHHHHHHHHHHHHCCHHHHCCCHHCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA