| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551619
Identifier: 209551619
GI number: 209551619
Start: 4223340
End: 4224296
Strand: Reverse
Name: 209551619
Synonym: Rleg2_4048
Alternate gene names: NA
Gene position: 4224296-4223340 (Counterclockwise)
Preceding gene: 209551620
Following gene: 209551617
Centisome position: 93.09
GC content: 61.44
Gene sequence:
>957_bases ATGGCACCGGAAGAACGAGGAGACAGCCAGGCCCGTCATGACCCCGAAGGCGTTCGCGCGCAGCTTGATCGTATCCTCGC AAGCCCGGAATTCCTTGCGCCTGAACGCGGGCGCCGCTTTTTGCAATATATCGTCGAAGAGACGCTTGAAGGCCACGGCG ACCAGCTTAAGGCCTTTGCGATCGCACAGGCGGTATTCGGCCGCGATGCCTCCTTCGATGCCCAGAACGATCCGGTTGTC CGCATCGAAGCGGGGCGCATCCGTCGCGCCCTCGAACGATACTATCTCGTCTGCGGAAGCGGCGACCCGATACAAATCAC CATTCCCAAAGGGGGCTATGCTCCGCATTTTTCCAGCGATGAAGGCTCCACCCCTGGTGGGGCGGCCACGCCGCCAAACC GCCAGGGCCATGTGCCCGGGCATGAGCGACCGCTACGCTATCGCGATCTTCTGCTGCCGATCGGGATTCCTGCCCTCTTC GGTGCAATCGCGGTACTCGCCCTCATCCGTCCGATCGAATCCTACCTCTCGCCACAGAAAACGCCGGCAGCACCTGCCGC GTCGACATTGATGGGCAAGACCAGGATGGTTGTCGAACCCTTCGCGGCCCTCGGCGGCACCGCGCGCGCGGCGGATTTTG CCAAGGGGCTGGTCGATCAGCTGATCGCCAAGCTCATGAAGGTGGATAGTCTTGTCGTGCTTGCTCCCGGTCGATCCGGC ATGGAGACGACCGGCTCGCTGTTCAATCTTCAGGGCAGCACCGTAGTCGAGGGCACGGTCCTGCATCTGCATGTCCGCCT GGTCAACGGCGCCGACGGCGCGGTCGTCTGGGCAAATCAATATGAACGCGAGCTGCGCGATCAAACCATTCTCGATGTCG AGGACGAAATTGCCGCTCAAATCATTATGGAAATTTCAAGTAGCCGCAAACTGAGCGGCGCAGGGCCGCTTCCGTAG
Upstream 100 bases:
>100_bases CCGGCAAAGTGACCTCGCCGGCGACTGTGACAGGCGACCGCCGACAGGTGGATAAAACGATCAGCCTTGAAGTGATATCA CCGCATCGCGGGAGGTCCAA
Downstream 100 bases:
>100_bases CCGCGGTGCAAGCGACCATGTTTCAGATCGCAGGGGGACCATCCAATAGGCATGGTTGCTCGCACCAAAGCTCTTTGATT TGTCCATGTCGGAACCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MAPEERGDSQARHDPEGVRAQLDRILASPEFLAPERGRRFLQYIVEETLEGHGDQLKAFAIAQAVFGRDASFDAQNDPVV RIEAGRIRRALERYYLVCGSGDPIQITIPKGGYAPHFSSDEGSTPGGAATPPNRQGHVPGHERPLRYRDLLLPIGIPALF GAIAVLALIRPIESYLSPQKTPAAPAASTLMGKTRMVVEPFAALGGTARAADFAKGLVDQLIAKLMKVDSLVVLAPGRSG METTGSLFNLQGSTVVEGTVLHLHVRLVNGADGAVVWANQYERELRDQTILDVEDEIAAQIIMEISSSRKLSGAGPLP
Sequences:
>Translated_318_residues MAPEERGDSQARHDPEGVRAQLDRILASPEFLAPERGRRFLQYIVEETLEGHGDQLKAFAIAQAVFGRDASFDAQNDPVV RIEAGRIRRALERYYLVCGSGDPIQITIPKGGYAPHFSSDEGSTPGGAATPPNRQGHVPGHERPLRYRDLLLPIGIPALF GAIAVLALIRPIESYLSPQKTPAAPAASTLMGKTRMVVEPFAALGGTARAADFAKGLVDQLIAKLMKVDSLVVLAPGRSG METTGSLFNLQGSTVVEGTVLHLHVRLVNGADGAVVWANQYERELRDQTILDVEDEIAAQIIMEISSSRKLSGAGPLP >Mature_317_residues APEERGDSQARHDPEGVRAQLDRILASPEFLAPERGRRFLQYIVEETLEGHGDQLKAFAIAQAVFGRDASFDAQNDPVVR IEAGRIRRALERYYLVCGSGDPIQITIPKGGYAPHFSSDEGSTPGGAATPPNRQGHVPGHERPLRYRDLLLPIGIPALFG AIAVLALIRPIESYLSPQKTPAAPAASTLMGKTRMVVEPFAALGGTARAADFAKGLVDQLIAKLMKVDSLVVLAPGRSGM ETTGSLFNLQGSTVVEGTVLHLHVRLVNGADGAVVWANQYERELRDQTILDVEDEIAAQIIMEISSSRKLSGAGPLP
Specific function: Unknown
COG id: COG5616
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34168; Mature: 34037
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPEERGDSQARHDPEGVRAQLDRILASPEFLAPERGRRFLQYIVEETLEGHGDQLKAFA CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH IAQAVFGRDASFDAQNDPVVRIEAGRIRRALERYYLVCGSGDPIQITIPKGGYAPHFSSD HHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCC EGSTPGGAATPPNRQGHVPGHERPLRYRDLLLPIGIPALFGAIAVLALIRPIESYLSPQK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC TPAAPAASTLMGKTRMVVEPFAALGGTARAADFAKGLVDQLIAKLMKVDSLVVLAPGRSG CCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC METTGSLFNLQGSTVVEGTVLHLHVRLVNGADGAVVWANQYERELRDQTILDVEDEIAAQ CCCCCCEEECCCCEEECCEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH IIMEISSSRKLSGAGPLP HHHHHHCCCCCCCCCCCC >Mature Secondary Structure APEERGDSQARHDPEGVRAQLDRILASPEFLAPERGRRFLQYIVEETLEGHGDQLKAFA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH IAQAVFGRDASFDAQNDPVVRIEAGRIRRALERYYLVCGSGDPIQITIPKGGYAPHFSSD HHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCC EGSTPGGAATPPNRQGHVPGHERPLRYRDLLLPIGIPALFGAIAVLALIRPIESYLSPQK CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC TPAAPAASTLMGKTRMVVEPFAALGGTARAADFAKGLVDQLIAKLMKVDSLVVLAPGRSG CCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCC METTGSLFNLQGSTVVEGTVLHLHVRLVNGADGAVVWANQYERELRDQTILDVEDEIAAQ CCCCCCEEECCCCEEECCEEEEEEEEEEECCCCEEEEHHHHHHHHHHHHCCCCHHHHHHH IIMEISSSRKLSGAGPLP HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA