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The map label for this gene is yrbE [H]

Identifier: 209551589

GI number: 209551589

Start: 4188302

End: 4189399

Strand: Direct

Name: yrbE [H]

Synonym: Rleg2_4018

Alternate gene names: 209551589

Gene position: 4188302-4189399 (Clockwise)

Preceding gene: 209551588

Following gene: 209551590

Centisome position: 92.3

GC content: 62.3

Gene sequence:

>1098_bases
ATGGCGGTCACGGGAAACAGTGACATGAGCATCAGAACGGTCGCGATCGTCGGCTGCGGTATCGGCCGCTCCCACATTGT
CGAGGGTTATCTGCCGCATGCCGACAAGTTCAAGGTCGTGGCGATCTGCGACCTGAATGAGCAGCGCATGGCGTCAGTCG
GCGACGAGTTCGGCATCGAGCGGCGCACCACCTCCTTTGCGGAGTTGCTCGCCGACGAAACGATCGACATCATCGATATC
TGCACTCCGCCCGGCATCCATCTGGAACAGGTGGTGGCTGCCCTCGCTGCCGGCAAACATGTCGTTTGCGAAAAGCCGCT
GACCGGCTCGCTTGCCGCCGTCGATACGATCATGGCAGCGGAGAAAGCCGCCAAAGGCGTGCTGATGCCGATCTTCCAGT
ATCGCTACGGCGACGGCATCCAGAAGGCCAAGCGGATTATCGACGCCGGCATTGCCGGCAAGGCCTACACGGCTTCGGTC
GAAACCTTCTGGCTGCGCAAGCCCGAATATTACGCCGTGCCCTGGCGCGGCAAATGGGCGACGGAACTCGGCGGCGTGCT
CGTCACCCATGCGCTGCATCTGCACGACATGATGATGCATCTGATGGGGCCGGCGGCAAGGGTCTTCGGCCGTGTCGCCA
CCCGCGTCAACGATATCGAGGTCGAGGATTGCGCCTCCGCCAGCCTGCTGATGGAAAGCGGCGCCTTCGTCTCGCTGTCC
TGCACGCTGGGTTCGCAGGAACAGTTGAGCCGGCTGAGGCTGCACTTCGAGAATGTTACCTTCGAAAGCAGCCATGAGCC
CTATACGCCAGGTAAGGATCCTTGGAAGATCATCGCCGCCAATGACGACGTGCAGGCAAAGATCGACCGGGTGATCAGCG
ACTGGCAGCCGGTCGCGCCGCGTTTCACTACCCAGATGGGCCAGTTTCACGCCTTCCTCAGCGGCCATGGGCCGCTGCCG
GTGACGACGGTGGATGCACGCCGCGCGCTGGAACTCGTCACCGCCATCTACCAGTCTTCCGACAGCGGCGCCGAAGTGCC
GCTGCCGGTCGGCCCGGACAGTCCGAAATACGTCGATTGGCGTGCAAGAACGAAGTAA

Upstream 100 bases:

>100_bases
TCGCCATGTCGACGCTGACGCTCGTGCCGGTGTTCTTCTTCTTCCTGTTCTTCCAGCGCCTGCTGATCGAAGGCATCGCC
ACCACGGGTATGAAGCGTTG

Downstream 100 bases:

>100_bases
TCGATAAATAAAACGAGAGGGGTTTTGAGAAGATGGCAACCAGTGTCGTTCTTCAGAAGGTCGAGAAGCGCTACGGCTCG
CTGGATGTGATCCATGGCAT

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MAVTGNSDMSIRTVAIVGCGIGRSHIVEGYLPHADKFKVVAICDLNEQRMASVGDEFGIERRTTSFAELLADETIDIIDI
CTPPGIHLEQVVAALAAGKHVVCEKPLTGSLAAVDTIMAAEKAAKGVLMPIFQYRYGDGIQKAKRIIDAGIAGKAYTASV
ETFWLRKPEYYAVPWRGKWATELGGVLVTHALHLHDMMMHLMGPAARVFGRVATRVNDIEVEDCASASLLMESGAFVSLS
CTLGSQEQLSRLRLHFENVTFESSHEPYTPGKDPWKIIAANDDVQAKIDRVISDWQPVAPRFTTQMGQFHAFLSGHGPLP
VTTVDARRALELVTAIYQSSDSGAEVPLPVGPDSPKYVDWRARTK

Sequences:

>Translated_365_residues
MAVTGNSDMSIRTVAIVGCGIGRSHIVEGYLPHADKFKVVAICDLNEQRMASVGDEFGIERRTTSFAELLADETIDIIDI
CTPPGIHLEQVVAALAAGKHVVCEKPLTGSLAAVDTIMAAEKAAKGVLMPIFQYRYGDGIQKAKRIIDAGIAGKAYTASV
ETFWLRKPEYYAVPWRGKWATELGGVLVTHALHLHDMMMHLMGPAARVFGRVATRVNDIEVEDCASASLLMESGAFVSLS
CTLGSQEQLSRLRLHFENVTFESSHEPYTPGKDPWKIIAANDDVQAKIDRVISDWQPVAPRFTTQMGQFHAFLSGHGPLP
VTTVDARRALELVTAIYQSSDSGAEVPLPVGPDSPKYVDWRARTK
>Mature_364_residues
AVTGNSDMSIRTVAIVGCGIGRSHIVEGYLPHADKFKVVAICDLNEQRMASVGDEFGIERRTTSFAELLADETIDIIDIC
TPPGIHLEQVVAALAAGKHVVCEKPLTGSLAAVDTIMAAEKAAKGVLMPIFQYRYGDGIQKAKRIIDAGIAGKAYTASVE
TFWLRKPEYYAVPWRGKWATELGGVLVTHALHLHDMMMHLMGPAARVFGRVATRVNDIEVEDCASASLLMESGAFVSLSC
TLGSQEQLSRLRLHFENVTFESSHEPYTPGKDPWKIIAANDDVQAKIDRVISDWQPVAPRFTTQMGQFHAFLSGHGPLPV
TTVDARRALELVTAIYQSSDSGAEVPLPVGPDSPKYVDWRARTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI1787574, Length=360, Percent_Identity=24.4444444444444, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39803; Mature: 39672

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTGNSDMSIRTVAIVGCGIGRSHIVEGYLPHADKFKVVAICDLNEQRMASVGDEFGIE
CEECCCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCHHHCCC
RRTTSFAELLADETIDIIDICTPPGIHLEQVVAALAAGKHVVCEKPLTGSLAAVDTIMAA
HHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
EKAAKGVLMPIFQYRYGDGIQKAKRIIDAGIAGKAYTASVETFWLRKPEYYAVPWRGKWA
HHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEECCCCCCHH
TELGGVLVTHALHLHDMMMHLMGPAARVFGRVATRVNDIEVEDCASASLLMESGAFVSLS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCEEEEE
CTLGSQEQLSRLRLHFENVTFESSHEPYTPGKDPWKIIAANDDVQAKIDRVISDWQPVAP
ECCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCC
RFTTQMGQFHAFLSGHGPLPVTTVDARRALELVTAIYQSSDSGAEVPLPVGPDSPKYVDW
HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC
RARTK
CCCCC
>Mature Secondary Structure 
AVTGNSDMSIRTVAIVGCGIGRSHIVEGYLPHADKFKVVAICDLNEQRMASVGDEFGIE
EECCCCCCEEEEEEEEECCCCHHHHHCCCCCCCCCEEEEEEECCCHHHHHHCCHHHCCC
RRTTSFAELLADETIDIIDICTPPGIHLEQVVAALAAGKHVVCEKPLTGSLAAVDTIMAA
HHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
EKAAKGVLMPIFQYRYGDGIQKAKRIIDAGIAGKAYTASVETFWLRKPEYYAVPWRGKWA
HHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEEECCCCCCHH
TELGGVLVTHALHLHDMMMHLMGPAARVFGRVATRVNDIEVEDCASASLLMESGAFVSLS
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHCCCEEEEE
CTLGSQEQLSRLRLHFENVTFESSHEPYTPGKDPWKIIAANDDVQAKIDRVISDWQPVAP
ECCCCHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCC
RFTTQMGQFHAFLSGHGPLPVTTVDARRALELVTAIYQSSDSGAEVPLPVGPDSPKYVDW
HHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECC
RARTK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]