| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551564
Identifier: 209551564
GI number: 209551564
Start: 4156514
End: 4158166
Strand: Reverse
Name: 209551564
Synonym: Rleg2_3993
Alternate gene names: NA
Gene position: 4158166-4156514 (Counterclockwise)
Preceding gene: 209551565
Following gene: 209551563
Centisome position: 91.63
GC content: 60.19
Gene sequence:
>1653_bases ATGCGCATAGACATCATCGATACCATTGCCGGGTTCGAGGCGCTGCGCGACAACTGGGATCAGGTCTTCATGGAAGATCC CGATGCGCAGCATTTCCTCTCCTGGATCTGGCTGAAGAATTATCTGTCCCGCCGGCGCCGCTGGTTCATACTCGCCCTTC GCGAACGCGATCCGTACGAACCCTACGTTGCTTTTTTTCCCCTACGCCTCATCACGCATCTGAACGAAAAGACCGGGCTC TTCTACGACGAGATCATCATGGCCGGGAATTTTGCGGCCGATTATACCGGCTTCATCGTCAGGCCGGATTACGAACATCA TGCCATTGCCGGCTTTGCCTCGTTTATCAAACATCAGAACTGGACCGACCTGAAGCTCGAATATTTCAGTGGCCCTGCCG GGCGGCGCGAGAAGATGATCGAGGCGCTGCGAGGACCGGAGGTGATGTTTCGCGACAGCTCGCCGAAAAACAATGAGAAC ATCGACAATACGATCTGCCCGATCGTTTCCCTGCCGGCAAGCTTCGACCACTATCTCGAACAGCGCATGAGCAGCCAGAC GCGCCAGAAGCTCCGCCGGTTCCTGCGCAAAGTCGAAGGCGACGATATCTACCGCATCACGATGTCGACCCCCGAGACCA TCCATCGCGACCTGGACATTCTCTTCGATCTCTGGCGGACCAAGTGGAGCGCCCGCAAAGGCGCGGAGCGGACCGAGCGG CTGATCATTACCACGCGCGAAATGCTGATGGACTGTTTCAACAACGGCAATCTCGAGGTGCCGGTCTTCTGGCATGGCGA CCAGCCGCTCGGCGCGCTGGCAAATATCGTCGACCGGCAGAAGAAAGCGATCCTCTTCTATATCACCGGTCGCGACGAAA ACTGGAAAACGCCGTCTCCCGGTCTCATCCTGCACGGTTACTGCATCCGGCGGGCGATCGAGCAGGGCTTCAAGACCTAT GACTTCCTGCGCGGAAACGAGCCCTATAAATATATGTTCGGGGTCGAGGAACGACACATCAGCTGCACGCTCTTCCGCAC CCGCAATGGCCAGAATCTGCATGGCGCGCTCAACCCGCGCAGCATTCGCTTCGTCTATGAGCAGGCGCTTGACATGTACC GCAACGGCGCCCGCCGGAGAGCGGAGATCGTCTTCAACCAGGTCCTGCAATCGGCTCCAGGCCATACCGGCGCGGGCTTC GGGCTGGCCAATCTGCTGTTCGACCGGGGCAAGCTGACGGAGGCACTGGCTGCCTATAAGGCGCTCGCCGAACAAGCGCC CGATCCGACACCGATCCGGATGCGGCTTGGCGACACGCAGCTTGCTTTGCATCAATACGACCAGGCCGCCGAGACGTTCC GCCTGGTCGGCGAGGTCGGGCCGCATCTGATCCAGGCGCATTACAAGCGTGGCATTGCCCTTGTTGCCGGTAAACGGCTG GCCGAGGCGGAAGCTGCTTTCGCCGCGATCCGGGACGTGCATTCGGACGATCCGGCCGCACTCGACTATGTTGCCAAGGC AAATGCCGCCCTCGAACGGATCCAGGCGAGCGCCGAACCCACGCCTCACAAGACCGATGTCGTGTCCGAGACCATCGCCC GCTGGAACCGGGGCTGGCAGCTCAGCGAGCGACGCCGGCCACGTTTGCACTGA
Upstream 100 bases:
>100_bases TAATTAAGCCCTGAAAATCATCCGGACGGTTTATTTGAAGATCGGTTTTTCCCCTTAGAATGAAAGCTCCCGAGTAATGT ATGGGGTATTGGGGGCGGCC
Downstream 100 bases:
>100_bases CGAGTACCTGCCGGCAGCGACAATGCGTTGCGGCGGTTCCTGGCAGCGAAGCCGCCATGGTCTTTGATTTCGAGCTGCGA TCGTTGTTAATAGAGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Adenylate Cyclase Protein; TPR Repeat-Containing Protein; Cellulose Biosynthesis Protein CelD; TPR And WD-40 Repeat-Containing Protein
Number of amino acids: Translated: 550; Mature: 550
Protein sequence:
>550_residues MRIDIIDTIAGFEALRDNWDQVFMEDPDAQHFLSWIWLKNYLSRRRRWFILALRERDPYEPYVAFFPLRLITHLNEKTGL FYDEIIMAGNFAADYTGFIVRPDYEHHAIAGFASFIKHQNWTDLKLEYFSGPAGRREKMIEALRGPEVMFRDSSPKNNEN IDNTICPIVSLPASFDHYLEQRMSSQTRQKLRRFLRKVEGDDIYRITMSTPETIHRDLDILFDLWRTKWSARKGAERTER LIITTREMLMDCFNNGNLEVPVFWHGDQPLGALANIVDRQKKAILFYITGRDENWKTPSPGLILHGYCIRRAIEQGFKTY DFLRGNEPYKYMFGVEERHISCTLFRTRNGQNLHGALNPRSIRFVYEQALDMYRNGARRRAEIVFNQVLQSAPGHTGAGF GLANLLFDRGKLTEALAAYKALAEQAPDPTPIRMRLGDTQLALHQYDQAAETFRLVGEVGPHLIQAHYKRGIALVAGKRL AEAEAAFAAIRDVHSDDPAALDYVAKANAALERIQASAEPTPHKTDVVSETIARWNRGWQLSERRRPRLH
Sequences:
>Translated_550_residues MRIDIIDTIAGFEALRDNWDQVFMEDPDAQHFLSWIWLKNYLSRRRRWFILALRERDPYEPYVAFFPLRLITHLNEKTGL FYDEIIMAGNFAADYTGFIVRPDYEHHAIAGFASFIKHQNWTDLKLEYFSGPAGRREKMIEALRGPEVMFRDSSPKNNEN IDNTICPIVSLPASFDHYLEQRMSSQTRQKLRRFLRKVEGDDIYRITMSTPETIHRDLDILFDLWRTKWSARKGAERTER LIITTREMLMDCFNNGNLEVPVFWHGDQPLGALANIVDRQKKAILFYITGRDENWKTPSPGLILHGYCIRRAIEQGFKTY DFLRGNEPYKYMFGVEERHISCTLFRTRNGQNLHGALNPRSIRFVYEQALDMYRNGARRRAEIVFNQVLQSAPGHTGAGF GLANLLFDRGKLTEALAAYKALAEQAPDPTPIRMRLGDTQLALHQYDQAAETFRLVGEVGPHLIQAHYKRGIALVAGKRL AEAEAAFAAIRDVHSDDPAALDYVAKANAALERIQASAEPTPHKTDVVSETIARWNRGWQLSERRRPRLH >Mature_550_residues MRIDIIDTIAGFEALRDNWDQVFMEDPDAQHFLSWIWLKNYLSRRRRWFILALRERDPYEPYVAFFPLRLITHLNEKTGL FYDEIIMAGNFAADYTGFIVRPDYEHHAIAGFASFIKHQNWTDLKLEYFSGPAGRREKMIEALRGPEVMFRDSSPKNNEN IDNTICPIVSLPASFDHYLEQRMSSQTRQKLRRFLRKVEGDDIYRITMSTPETIHRDLDILFDLWRTKWSARKGAERTER LIITTREMLMDCFNNGNLEVPVFWHGDQPLGALANIVDRQKKAILFYITGRDENWKTPSPGLILHGYCIRRAIEQGFKTY DFLRGNEPYKYMFGVEERHISCTLFRTRNGQNLHGALNPRSIRFVYEQALDMYRNGARRRAEIVFNQVLQSAPGHTGAGF GLANLLFDRGKLTEALAAYKALAEQAPDPTPIRMRLGDTQLALHQYDQAAETFRLVGEVGPHLIQAHYKRGIALVAGKRL AEAEAAFAAIRDVHSDDPAALDYVAKANAALERIQASAEPTPHKTDVVSETIARWNRGWQLSERRRPRLH
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63586; Mature: 63586
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIDIIDTIAGFEALRDNWDQVFMEDPDAQHFLSWIWLKNYLSRRRRWFILALRERDPYE CEEEHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCC PYVAFFPLRLITHLNEKTGLFYDEIIMAGNFAADYTGFIVRPDYEHHAIAGFASFIKHQN CHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCC WTDLKLEYFSGPAGRREKMIEALRGPEVMFRDSSPKNNENIDNTICPIVSLPASFDHYLE CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHH QRMSSQTRQKLRRFLRKVEGDDIYRITMSTPETIHRDLDILFDLWRTKWSARKGAERTER HHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LIITTREMLMDCFNNGNLEVPVFWHGDQPLGALANIVDRQKKAILFYITGRDENWKTPSP HHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC GLILHGYCIRRAIEQGFKTYDFLRGNEPYKYMFGVEERHISCTLFRTRNGQNLHGALNPR CEEEHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCH SIRFVYEQALDMYRNGARRRAEIVFNQVLQSAPGHTGAGFGLANLLFDRGKLTEALAAYK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHH ALAEQAPDPTPIRMRLGDTQLALHQYDQAAETFRLVGEVGPHLIQAHYKRGIALVAGKRL HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHH AEAEAAFAAIRDVHSDDPAALDYVAKANAALERIQASAEPTPHKTDVVSETIARWNRGWQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC LSERRRPRLH CCCCCCCCCC >Mature Secondary Structure MRIDIIDTIAGFEALRDNWDQVFMEDPDAQHFLSWIWLKNYLSRRRRWFILALRERDPYE CEEEHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCC PYVAFFPLRLITHLNEKTGLFYDEIIMAGNFAADYTGFIVRPDYEHHAIAGFASFIKHQN CHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCC WTDLKLEYFSGPAGRREKMIEALRGPEVMFRDSSPKNNENIDNTICPIVSLPASFDHYLE CCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHH QRMSSQTRQKLRRFLRKVEGDDIYRITMSTPETIHRDLDILFDLWRTKWSARKGAERTER HHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LIITTREMLMDCFNNGNLEVPVFWHGDQPLGALANIVDRQKKAILFYITGRDENWKTPSP HHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC GLILHGYCIRRAIEQGFKTYDFLRGNEPYKYMFGVEERHISCTLFRTRNGQNLHGALNPR CEEEHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCCCCH SIRFVYEQALDMYRNGARRRAEIVFNQVLQSAPGHTGAGFGLANLLFDRGKLTEALAAYK HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHH ALAEQAPDPTPIRMRLGDTQLALHQYDQAAETFRLVGEVGPHLIQAHYKRGIALVAGKRL HHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHH AEAEAAFAAIRDVHSDDPAALDYVAKANAALERIQASAEPTPHKTDVVSETIARWNRGWQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC LSERRRPRLH CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA