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The map label for this gene is secB [H]

Identifier: 209551511

GI number: 209551511

Start: 4089983

End: 4090465

Strand: Reverse

Name: secB [H]

Synonym: Rleg2_3940

Alternate gene names: 209551511

Gene position: 4090465-4089983 (Counterclockwise)

Preceding gene: 209551512

Following gene: 209551505

Centisome position: 90.14

GC content: 60.04

Gene sequence:

>483_bases
ATGGCAGACGATAACAACACCAACGGTGCGGCCAGCCCCACCCTTTCGATCCTTGCGCAGTATACCAAGGATCTCTCCTT
CGAAAATCCGGGTGCACCGCGTTCGCTGCAGGCCCGCGACAAGGCGCCGACGATCAACATCAATGTGAACGTCAACGCCA
ACCCGCTTTCGGATACGGATTTCGATGTCGTGCTGTCGCTGAATGCGGAAGCCAAGGACGGCGACAAGACGGTGTTCCAT
ACGGAACTCGCTTATGGCGGCGTCTTCCGCGTTGCCGGTTTCCCGCAGGAACATATGCTGCCGGTTCTCTTCATCGAGTG
CCCGCGCATGCTCTTCCCCTTCGCCCGTCAGATCATCGCCGACGTCACCCGCAACGGCGGTTTCCCGCCGCTGATGATCG
ACCCGATCGACTTCACGCAGATGTTCGCCCAGCGCGTTGCCGAAGAACAGGCCCGCGCCAAGGTTGAAGCCGTTCCGAAC
TGA

Upstream 100 bases:

>100_bases
GCGCTTCGACCGATCAACGGCGGCAAGCGCTCAGGGTTGTAAGCCCTTCCCTGAAATGTTAGATGGCGGCACCATTCCCA
TGCCCCTCGAGGAAAAGCCA

Downstream 100 bases:

>100_bases
TCGGATTTTTCGGTTTTGAGATGCGGATGCCCGGGCAAGTCCCGGGCATTTTCAATTGTGGCCGGTTTGGTCCAGGCTGG
CATATTTCGCCCAGATGCCT

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MADDNNTNGAASPTLSILAQYTKDLSFENPGAPRSLQARDKAPTININVNVNANPLSDTDFDVVLSLNAEAKDGDKTVFH
TELAYGGVFRVAGFPQEHMLPVLFIECPRMLFPFARQIIADVTRNGGFPPLMIDPIDFTQMFAQRVAEEQARAKVEAVPN

Sequences:

>Translated_160_residues
MADDNNTNGAASPTLSILAQYTKDLSFENPGAPRSLQARDKAPTININVNVNANPLSDTDFDVVLSLNAEAKDGDKTVFH
TELAYGGVFRVAGFPQEHMLPVLFIECPRMLFPFARQIIADVTRNGGFPPLMIDPIDFTQMFAQRVAEEQARAKVEAVPN
>Mature_159_residues
ADDNNTNGAASPTLSILAQYTKDLSFENPGAPRSLQARDKAPTININVNVNANPLSDTDFDVVLSLNAEAKDGDKTVFHT
ELAYGGVFRVAGFPQEHMLPVLFIECPRMLFPFARQIIADVTRNGGFPPLMIDPIDFTQMFAQRVAEEQARAKVEAVPN

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=156, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 17522; Mature: 17391

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDNNTNGAASPTLSILAQYTKDLSFENPGAPRSLQARDKAPTININVNVNANPLSDTD
CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
FDVVLSLNAEAKDGDKTVFHTELAYGGVFRVAGFPQEHMLPVLFIECPRMLFPFARQIIA
EEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCHHHCCHHHEECCHHHHHHHHHHHHH
DVTRNGGFPPLMIDPIDFTQMFAQRVAEEQARAKVEAVPN
HHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ADDNNTNGAASPTLSILAQYTKDLSFENPGAPRSLQARDKAPTININVNVNANPLSDTD
CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
FDVVLSLNAEAKDGDKTVFHTELAYGGVFRVAGFPQEHMLPVLFIECPRMLFPFARQIIA
EEEEEEECCCCCCCCCEEEEEECCCCCEEEECCCCHHHCCHHHEECCHHHHHHHHHHHHH
DVTRNGGFPPLMIDPIDFTQMFAQRVAEEQARAKVEAVPN
HHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA