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The map label for this gene is 209551504

Identifier: 209551504

GI number: 209551504

Start: 4084299

End: 4084835

Strand: Reverse

Name: 209551504

Synonym: Rleg2_3933

Alternate gene names: NA

Gene position: 4084835-4084299 (Counterclockwise)

Preceding gene: 209551505

Following gene: 209551503

Centisome position: 90.02

GC content: 59.22

Gene sequence:

>537_bases
ATGGAAAGGCAGACCGATCGCCGGACCGGCGCCTATGCCCGCCGGCGCGCGCATTTTGCGCTGGTTTTCTTCGCGCTGAT
GGCGGTCGGGCTTTTCGCCTGGAACCCTGATAATCTCTATCTCTGGATCAAGGCGCTGCACATCATCGCGGTGATTTCCT
GGATGGCCGGGTTGTTCTATATGCCGCGGCTGTTCATCTACCACACCGATGCCGAACCGGGCTCGGTGCAATCGGAAACC
TTCAAGGTGATGGAGCGCCGGCTGCTTCGGATCATCATGACGCCGGCGATGATGCTGACATGGATTTTCGGCCTTTATCT
CGCCTGGTCGGTCTATGGATTCCAGGGCGGCTGGCTGCATGCCAAGATCGGCCTCGTCGTGCTGCTGACCGGTGTTCATA
TGTTTTTCAGCCGCGCGGTCCGCGCCTTCGAGCGAGATGAAAATCGCCGCTCCGCGCGCTATTGGCGCTTCATGAACGAG
GCGCCGACCTTGCTGATGATCGTGATCGTGATCCTCGTTGTGGTGAAGCCGTTCTGA

Upstream 100 bases:

>100_bases
TCAATCTCGGCCACGGCATCACGCCGCAGGCCGACCCCGAGCATGTGCGCCTGCTGGTCGATCGCGTGCGGGGTGGCCAG
ATGCGAGGCGGGAAGTGACG

Downstream 100 bases:

>100_bases
GGCGGAAATCGCCCTCAGGTTAAATTTGCTTCATTTTAAGCAGCCCTCTTGCGGCGGCGATTGCGAGTCGCTATTTTCCG
CGCAACTCATCTACGTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MERQTDRRTGAYARRRAHFALVFFALMAVGLFAWNPDNLYLWIKALHIIAVISWMAGLFYMPRLFIYHTDAEPGSVQSET
FKVMERRLLRIIMTPAMMLTWIFGLYLAWSVYGFQGGWLHAKIGLVVLLTGVHMFFSRAVRAFERDENRRSARYWRFMNE
APTLLMIVIVILVVVKPF

Sequences:

>Translated_178_residues
MERQTDRRTGAYARRRAHFALVFFALMAVGLFAWNPDNLYLWIKALHIIAVISWMAGLFYMPRLFIYHTDAEPGSVQSET
FKVMERRLLRIIMTPAMMLTWIFGLYLAWSVYGFQGGWLHAKIGLVVLLTGVHMFFSRAVRAFERDENRRSARYWRFMNE
APTLLMIVIVILVVVKPF
>Mature_178_residues
MERQTDRRTGAYARRRAHFALVFFALMAVGLFAWNPDNLYLWIKALHIIAVISWMAGLFYMPRLFIYHTDAEPGSVQSET
FKVMERRLLRIIMTPAMMLTWIFGLYLAWSVYGFQGGWLHAKIGLVVLLTGVHMFFSRAVRAFERDENRRSARYWRFMNE
APTLLMIVIVILVVVKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 20898; Mature: 20898

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERQTDRRTGAYARRRAHFALVFFALMAVGLFAWNPDNLYLWIKALHIIAVISWMAGLFY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MPRLFIYHTDAEPGSVQSETFKVMERRLLRIIMTPAMMLTWIFGLYLAWSVYGFQGGWLH
HHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AKIGLVVLLTGVHMFFSRAVRAFERDENRRSARYWRFMNEAPTLLMIVIVILVVVKPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MERQTDRRTGAYARRRAHFALVFFALMAVGLFAWNPDNLYLWIKALHIIAVISWMAGLFY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
MPRLFIYHTDAEPGSVQSETFKVMERRLLRIIMTPAMMLTWIFGLYLAWSVYGFQGGWLH
HHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AKIGLVVLLTGVHMFFSRAVRAFERDENRRSARYWRFMNEAPTLLMIVIVILVVVKPF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]