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The map label for this gene is holA

Identifier: 209551497

GI number: 209551497

Start: 4076001

End: 4077041

Strand: Direct

Name: holA

Synonym: Rleg2_3926

Alternate gene names: NA

Gene position: 4076001-4077041 (Clockwise)

Preceding gene: 209551496

Following gene: 209551506

Centisome position: 89.82

GC content: 58.69

Gene sequence:

>1041_bases
GTGGCGGAGATAAAATCCCACGAATTCGAAACCTTCCTGCAGAAATCGGCGCGGAACTATCGGATCTTTGTCATTTACGG
ACCCGACCGCGGTCTCGTGTCCGAGCGGGCCGCTCAGTTGGCCGGTAAGACCGGTGTGGCTCTCGATGATCCCTTCTCGC
TGACCAAACTCGATATTGGCGACCTGCAGAAGGATCCCGGACGGTTGGTCGACGAGGCCCAGTCTATCGGACTGTTCGGT
GGTGAGAAGCTGATCTGGATCCGCGGCGCCGCCAACGAAAAATATCTTGTCGACCCCTTGGCGCTGCTGGCCGAAAAGCC
ACTCGAAGCCGCCCATCTGATCGTCGAAGCTGGTGACTTAAAGAAGGGTTCGCTGCTGCGCAAGACCGCCGAGGCAGCGC
GATCGATCATGACGATCCCGTCTTATGCCGATGACAGCCGCGCCCTGAACACTCTGATCGATGCCGAATTGAGCGCAGAA
AAGCTCGGCATCACGCCGGCCGCGCGCCAAGCTCTAATCGCCCTGATCGGGGGCGACCGCATCGCTTCACGCAACGAGGT
GCGCAAGCTTGCGCTCTATTGCCGCGGCTTTCCGACGGTCGAAGAACATCACGTTACCGAAATAATCGGCGACGCCAGTG
CGATATCCGTTGACGATGCCGTCGACGCCATTTTGAGCGGCGATCTCAACGGTTTTCTGCACGCAATGCAGAAGATCAGC
AGCTCCAAAACCGCGATTTTTCTCGTGTTGCAGGCATGCCTGAAGCAGTTCCAGCTTCTCGATACCATGCGGGCCGAAAT
GGAAGAGAAGCGCCTGCAGGCGCCTCAGATTATGCAGACGATGGGCCGTCATTTGCATTTCCGCCGCAAGCCGATCATCG
AACAGGCATTGCGCCAATGGACCGCGGAAGCCATCGCGCGTGAATCCAATCGCCTGCAGGCCGCCATTCTGCAAAGCCGC
CGGCGACAGGTGCTGGAGGATAGCGTGGCGATGCAAACACTTCTGTCCACGACCCTTCAATCCGGCCGCAAATCCGCCTG
A

Upstream 100 bases:

>100_bases
CAGCGGGCAATCCGCGATGCCCAGAACCGTGCGGCCGATCAGGTGGCGGAATTCGTCGGAGCCGATATCGCCGCTGCGCT
CAGCCGCTGAGGGCGGGAAT

Downstream 100 bases:

>100_bases
CCGAGTTTCATCAATGCATGTCGTTATCCCGGAACTGCTGCGCAGCTCCGGCAACTTGCATTAACGTCTTTCGAGCAGAC
GGCAGATTTCCTCGAGCTGC

Product: DNA polymerase III subunit delta

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Delta Subunit

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MAEIKSHEFETFLQKSARNYRIFVIYGPDRGLVSERAAQLAGKTGVALDDPFSLTKLDIGDLQKDPGRLVDEAQSIGLFG
GEKLIWIRGAANEKYLVDPLALLAEKPLEAAHLIVEAGDLKKGSLLRKTAEAARSIMTIPSYADDSRALNTLIDAELSAE
KLGITPAARQALIALIGGDRIASRNEVRKLALYCRGFPTVEEHHVTEIIGDASAISVDDAVDAILSGDLNGFLHAMQKIS
SSKTAIFLVLQACLKQFQLLDTMRAEMEEKRLQAPQIMQTMGRHLHFRRKPIIEQALRQWTAEAIARESNRLQAAILQSR
RRQVLEDSVAMQTLLSTTLQSGRKSA

Sequences:

>Translated_346_residues
MAEIKSHEFETFLQKSARNYRIFVIYGPDRGLVSERAAQLAGKTGVALDDPFSLTKLDIGDLQKDPGRLVDEAQSIGLFG
GEKLIWIRGAANEKYLVDPLALLAEKPLEAAHLIVEAGDLKKGSLLRKTAEAARSIMTIPSYADDSRALNTLIDAELSAE
KLGITPAARQALIALIGGDRIASRNEVRKLALYCRGFPTVEEHHVTEIIGDASAISVDDAVDAILSGDLNGFLHAMQKIS
SSKTAIFLVLQACLKQFQLLDTMRAEMEEKRLQAPQIMQTMGRHLHFRRKPIIEQALRQWTAEAIARESNRLQAAILQSR
RRQVLEDSVAMQTLLSTTLQSGRKSA
>Mature_345_residues
AEIKSHEFETFLQKSARNYRIFVIYGPDRGLVSERAAQLAGKTGVALDDPFSLTKLDIGDLQKDPGRLVDEAQSIGLFGG
EKLIWIRGAANEKYLVDPLALLAEKPLEAAHLIVEAGDLKKGSLLRKTAEAARSIMTIPSYADDSRALNTLIDAELSAEK
LGITPAARQALIALIGGDRIASRNEVRKLALYCRGFPTVEEHHVTEIIGDASAISVDDAVDAILSGDLNGFLHAMQKISS
SKTAIFLVLQACLKQFQLLDTMRAEMEEKRLQAPQIMQTMGRHLHFRRKPIIEQALRQWTAEAIARESNRLQAAILQSRR
RQVLEDSVAMQTLLSTTLQSGRKSA

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 38136; Mature: 38005

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIKSHEFETFLQKSARNYRIFVIYGPDRGLVSERAAQLAGKTGVALDDPFSLTKLDIG
CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCC
DLQKDPGRLVDEAQSIGLFGGEKLIWIRGAANEKYLVDPLALLAEKPLEAAHLIVEAGDL
CCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC
KKGSLLRKTAEAARSIMTIPSYADDSRALNTLIDAELSAEKLGITPAARQALIALIGGDR
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
IASRNEVRKLALYCRGFPTVEEHHVTEIIGDASAISVDDAVDAILSGDLNGFLHAMQKIS
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHC
SSKTAIFLVLQACLKQFQLLDTMRAEMEEKRLQAPQIMQTMGRHLHFRRKPIIEQALRQW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
TAEAIARESNRLQAAILQSRRRQVLEDSVAMQTLLSTTLQSGRKSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AEIKSHEFETFLQKSARNYRIFVIYGPDRGLVSERAAQLAGKTGVALDDPFSLTKLDIG
CCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCC
DLQKDPGRLVDEAQSIGLFGGEKLIWIRGAANEKYLVDPLALLAEKPLEAAHLIVEAGDL
CCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCC
KKGSLLRKTAEAARSIMTIPSYADDSRALNTLIDAELSAEKLGITPAARQALIALIGGDR
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
IASRNEVRKLALYCRGFPTVEEHHVTEIIGDASAISVDDAVDAILSGDLNGFLHAMQKIS
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHC
SSKTAIFLVLQACLKQFQLLDTMRAEMEEKRLQAPQIMQTMGRHLHFRRKPIIEQALRQW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
TAEAIARESNRLQAAILQSRRRQVLEDSVAMQTLLSTTLQSGRKSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA