| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551438
Identifier: 209551438
GI number: 209551438
Start: 4009831
End: 4011003
Strand: Reverse
Name: 209551438
Synonym: Rleg2_3867
Alternate gene names: NA
Gene position: 4011003-4009831 (Counterclockwise)
Preceding gene: 209551439
Following gene: 209551433
Centisome position: 88.39
GC content: 50.38
Gene sequence:
>1173_bases GTGAGCGCACCCGTTCGTGACACAGAATATGAAGGGCCAATCCAGTCGATTTTGCGGCTATTTTTAAGTGTCGATCTTGT AGGGTCGACGGCGTTTAAACAAGCCAACCAGCGAGCTTTTAAGTCCGATGAAAAGGCTGGTGAGGGGTCGATTGCCGAAC CCTGGTTCTCTCCGATTGCGCAATTCTACAAGGAGATTGAGCGCCTTTTTGCGAGAGAGTGGCAGTTATACGCTGAGGGG TTGGCTTCTCGCATCGGGTGGCCGGCTGGTCCGGCGCCCGAACTCTGGAAAAGCGCCGGTGACGAACTGCTCTACGTAAA AGTCCTTCGTGATCACAGAGAAGCCACTGCTTGCATAATATGTTGGATGCGCACGATCGAGGAATACCGAAGCGATCTTA AACAGAAATATCCGACTCTCGACCTTAAATGCACCGCATGGGTTGCGGGATTTCCAATAGCCAACACCGAGGTTGTCTTC GCCAAGCGCGTCGACAATGAGGAAATTCCCGATGACGCTGACCCACTTTTTGCGAATCTCGATCTACTGCATCGTTATGA TGCAGATCCAAATGACCGGGCCTTGACCAAGGATTACATTGGTCCGTCCGTGGACACTGGGTTCCGGCTATGCGAACTGA GTACCGCGCGGAAGTTTGTCATCTCTGTAGATCTGGCGTTGATGGTAGTGCATGCAGTTCGTGCTCGACCCGCAGGTGCA GATGAGATCGATGTTAAATTGCACTACGACGGTCGCGTCGGGTTAAAGGGCGTGCTTGGAGGGCATCCATATCCGGTATT CTGGATCGATATGGCTTCAGATTCCAGCCTCGACAAACTCGAAGACAAGCTTCTCGAAATCCAGCCTCGAAATACCGATG ATATCAAAAGCTATTGCGAAGAGTTTTTTAATTCACATAGCTCAAATGCAATGATTCCTTACATTGTTGGGAACCAGGAT CCGTACTTTGCATCGATGCCGGAATCGCATGCAAAAAAAATTAAACTGCTGCGCGACTACTGGGAAAATGAAAGATCCCG TCGAGACCAGGAGCGTGAAAGTTCCAAGGCTGAAGGACCAGGCGAAGAACCTGGCAAAGAGCAAGTTGAGGGGCTTTTTG CCTCCTTGTTACGCCTCATTGTAGAAAATACACCAGATCGGCCGACCAAATAG
Upstream 100 bases:
>100_bases CTGCTTGGACTGAACTGAACGGAATTCTTGGTGAGGTGGCGGGACATTTCGGTGTTTCTACCGAAGCTGCTCGGATCAGG GCGGAATACTTAGGTCTCAA
Downstream 100 bases:
>100_bases CCATAACACGGCGATCCCATACTGCGCGTGCTTAGTTCCTAATTGATAAGTGTGATGTTACCTTTTGCTGGTCGTGCCGG GGCTGGGCCTGTCAAGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MSAPVRDTEYEGPIQSILRLFLSVDLVGSTAFKQANQRAFKSDEKAGEGSIAEPWFSPIAQFYKEIERLFAREWQLYAEG LASRIGWPAGPAPELWKSAGDELLYVKVLRDHREATACIICWMRTIEEYRSDLKQKYPTLDLKCTAWVAGFPIANTEVVF AKRVDNEEIPDDADPLFANLDLLHRYDADPNDRALTKDYIGPSVDTGFRLCELSTARKFVISVDLALMVVHAVRARPAGA DEIDVKLHYDGRVGLKGVLGGHPYPVFWIDMASDSSLDKLEDKLLEIQPRNTDDIKSYCEEFFNSHSSNAMIPYIVGNQD PYFASMPESHAKKIKLLRDYWENERSRRDQERESSKAEGPGEEPGKEQVEGLFASLLRLIVENTPDRPTK
Sequences:
>Translated_390_residues MSAPVRDTEYEGPIQSILRLFLSVDLVGSTAFKQANQRAFKSDEKAGEGSIAEPWFSPIAQFYKEIERLFAREWQLYAEG LASRIGWPAGPAPELWKSAGDELLYVKVLRDHREATACIICWMRTIEEYRSDLKQKYPTLDLKCTAWVAGFPIANTEVVF AKRVDNEEIPDDADPLFANLDLLHRYDADPNDRALTKDYIGPSVDTGFRLCELSTARKFVISVDLALMVVHAVRARPAGA DEIDVKLHYDGRVGLKGVLGGHPYPVFWIDMASDSSLDKLEDKLLEIQPRNTDDIKSYCEEFFNSHSSNAMIPYIVGNQD PYFASMPESHAKKIKLLRDYWENERSRRDQERESSKAEGPGEEPGKEQVEGLFASLLRLIVENTPDRPTK >Mature_389_residues SAPVRDTEYEGPIQSILRLFLSVDLVGSTAFKQANQRAFKSDEKAGEGSIAEPWFSPIAQFYKEIERLFAREWQLYAEGL ASRIGWPAGPAPELWKSAGDELLYVKVLRDHREATACIICWMRTIEEYRSDLKQKYPTLDLKCTAWVAGFPIANTEVVFA KRVDNEEIPDDADPLFANLDLLHRYDADPNDRALTKDYIGPSVDTGFRLCELSTARKFVISVDLALMVVHAVRARPAGAD EIDVKLHYDGRVGLKGVLGGHPYPVFWIDMASDSSLDKLEDKLLEIQPRNTDDIKSYCEEFFNSHSSNAMIPYIVGNQDP YFASMPESHAKKIKLLRDYWENERSRRDQERESSKAEGPGEEPGKEQVEGLFASLLRLIVENTPDRPTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44196; Mature: 44065
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPVRDTEYEGPIQSILRLFLSVDLVGSTAFKQANQRAFKSDEKAGEGSIAEPWFSPIA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QFYKEIERLFAREWQLYAEGLASRIGWPAGPAPELWKSAGDELLYVKVLRDHREATACII HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHH CWMRTIEEYRSDLKQKYPTLDLKCTAWVAGFPIANTEVVFAKRVDNEEIPDDADPLFANL HHHHHHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHH DLLHRYDADPNDRALTKDYIGPSVDTGFRLCELSTARKFVISVDLALMVVHAVRARPAGA HHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DEIDVKLHYDGRVGLKGVLGGHPYPVFWIDMASDSSLDKLEDKLLEIQPRNTDDIKSYCE CCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH EFFNSHSSNAMIPYIVGNQDPYFASMPESHAKKIKLLRDYWENERSRRDQERESSKAEGP HHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEEPGKEQVEGLFASLLRLIVENTPDRPTK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SAPVRDTEYEGPIQSILRLFLSVDLVGSTAFKQANQRAFKSDEKAGEGSIAEPWFSPIA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH QFYKEIERLFAREWQLYAEGLASRIGWPAGPAPELWKSAGDELLYVKVLRDHREATACII HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHH CWMRTIEEYRSDLKQKYPTLDLKCTAWVAGFPIANTEVVFAKRVDNEEIPDDADPLFANL HHHHHHHHHHHHHHHHCCCCCEEEEHEEECCCCCCCEEEEEECCCCCCCCCCCCHHHHHH DLLHRYDADPNDRALTKDYIGPSVDTGFRLCELSTARKFVISVDLALMVVHAVRARPAGA HHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DEIDVKLHYDGRVGLKGVLGGHPYPVFWIDMASDSSLDKLEDKLLEIQPRNTDDIKSYCE CCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHH EFFNSHSSNAMIPYIVGNQDPYFASMPESHAKKIKLLRDYWENERSRRDQERESSKAEGP HHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GEEPGKEQVEGLFASLLRLIVENTPDRPTK CCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA