| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551424
Identifier: 209551424
GI number: 209551424
Start: 3995568
End: 3996626
Strand: Reverse
Name: 209551424
Synonym: Rleg2_3853
Alternate gene names: NA
Gene position: 3996626-3995568 (Counterclockwise)
Preceding gene: 209551425
Following gene: 209551423
Centisome position: 88.07
GC content: 62.89
Gene sequence:
>1059_bases ATGCAATTCGTATTTGACGGCCACAACGACGTTCTCCTTCGACTCTGGACACATTCAAAAGACGGCAGCGATCCGATCTC GGAATTTGCAGACGGCACGACGGTCGGGCATATCGATGCGCGCCGGGCCAGGGAGGGCGGCCTTTCGGGCGGTCTTTGCG CCATCTACATTCCCTCCGGCGACCTGGTCTTTGCCGATCCGGATGCTGACGGCCGTTATATCACGCCGATGGCGGCGCCT CTCGATCCGCTGCCGTCCCTTGCCATCGCCACTGAAATGGCGGCGATCGCGTTGCGGCTCGACCAGGCCGGCGCCTGGCG GCTCTGCCGGACGGTGAAGGATATCCGCGGCGCCATGGCGGACGATATTTTTGCCGCCGTCCTGCATATGGAAGGCTGCG AAGCGATCGGCGCCGATCTTGCGGCGCTCGAAGTCTTCTACGCAGCCGGGCTGCGGTCGCTCGGGCCGGTCTGGAGCCGG CACAATGTCTTCGGTTACGGCGTGCCCTTCGCCTTTCCGATGTCGCCGGACACGGCACCCGGCCTCACCGATGCCGGTTT TGCGCTGGTGCGGGAATGCAATCGCCTCGGTATCGTGATCGACCTTGCCCACATCACCGAGAAGGGCTTCTGGGACGTGG CGAAGACGACGGACCAGCCGCTGGTCTCCAGCCATTCCAATGCCCATGCGCTGACGCCGGTCGCGCGCAATCTGACCGAC AGGCAGCTCGATGCGATCCGCGAAAGCCGCGGGCTCGTCGGCATCAATTATGCCACCGCCATGCTGCGTCCCGACGGCCG CTCGGACAGCGATACACCGCTTGCCGACATGATCCGCCATATCGACTATCTGGTGAACCGCATCGGCATCGATTGCGTCG GCCTCGGATCGGACTTCGACGGGGCCACAATTCCTGAGGAAATCGGCGATGCAAGCGGCAATCAGAAGCTGATTGCCGCT CTCAGGGAGGTTGGTTATGGTGAGGCCGATCTCACGAAACTTGCCCGTGAAAATTGGCTTCGCATCCTCGCACAAGCCTG GCGCGAGGACGACGCCTAA
Upstream 100 bases:
>100_bases TCGGATTTTGGAGCGTGAGAGCGGATTTATAAAAAAGAGGTGGCGAATTCCGTCAGCTTTTCTATTCTGGTCTTCCCGCT CGGGCAGCGCAGGAAGACAG
Downstream 100 bases:
>100_bases AGCGTTGCGCACCTCTGGACGCGCCAGGAATGGGCAATAGTTTTAATGAGGCAGGACCGACAAAACGCTTCGTAATCAAT CAAAACAGGGGGAACTGACC
Product: peptidase M19 renal dipeptidase
Products: NA
Alternate protein names: ORF X [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MQFVFDGHNDVLLRLWTHSKDGSDPISEFADGTTVGHIDARRAREGGLSGGLCAIYIPSGDLVFADPDADGRYITPMAAP LDPLPSLAIATEMAAIALRLDQAGAWRLCRTVKDIRGAMADDIFAAVLHMEGCEAIGADLAALEVFYAAGLRSLGPVWSR HNVFGYGVPFAFPMSPDTAPGLTDAGFALVRECNRLGIVIDLAHITEKGFWDVAKTTDQPLVSSHSNAHALTPVARNLTD RQLDAIRESRGLVGINYATAMLRPDGRSDSDTPLADMIRHIDYLVNRIGIDCVGLGSDFDGATIPEEIGDASGNQKLIAA LREVGYGEADLTKLARENWLRILAQAWREDDA
Sequences:
>Translated_352_residues MQFVFDGHNDVLLRLWTHSKDGSDPISEFADGTTVGHIDARRAREGGLSGGLCAIYIPSGDLVFADPDADGRYITPMAAP LDPLPSLAIATEMAAIALRLDQAGAWRLCRTVKDIRGAMADDIFAAVLHMEGCEAIGADLAALEVFYAAGLRSLGPVWSR HNVFGYGVPFAFPMSPDTAPGLTDAGFALVRECNRLGIVIDLAHITEKGFWDVAKTTDQPLVSSHSNAHALTPVARNLTD RQLDAIRESRGLVGINYATAMLRPDGRSDSDTPLADMIRHIDYLVNRIGIDCVGLGSDFDGATIPEEIGDASGNQKLIAA LREVGYGEADLTKLARENWLRILAQAWREDDA >Mature_352_residues MQFVFDGHNDVLLRLWTHSKDGSDPISEFADGTTVGHIDARRAREGGLSGGLCAIYIPSGDLVFADPDADGRYITPMAAP LDPLPSLAIATEMAAIALRLDQAGAWRLCRTVKDIRGAMADDIFAAVLHMEGCEAIGADLAALEVFYAAGLRSLGPVWSR HNVFGYGVPFAFPMSPDTAPGLTDAGFALVRECNRLGIVIDLAHITEKGFWDVAKTTDQPLVSSHSNAHALTPVARNLTD RQLDAIRESRGLVGINYATAMLRPDGRSDSDTPLADMIRHIDYLVNRIGIDCVGLGSDFDGATIPEEIGDASGNQKLIAA LREVGYGEADLTKLARENWLRILAQAWREDDA
Specific function: Unknown
COG id: COG2355
COG function: function code E; Zn-dependent dipeptidase, microsomal dipeptidase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M19 family [H]
Homologues:
Organism=Homo sapiens, GI189458885, Length=353, Percent_Identity=25.2124645892351, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4758190, Length=353, Percent_Identity=25.2124645892351, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI11641269, Length=343, Percent_Identity=25.0728862973761, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI193211608, Length=268, Percent_Identity=25.7462686567164, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI193211610, Length=268, Percent_Identity=25.7462686567164, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI221475880, Length=361, Percent_Identity=28.5318559556787, Blast_Score=124, Evalue=9e-29, Organism=Drosophila melanogaster, GI281362638, Length=358, Percent_Identity=27.0949720670391, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI281362636, Length=358, Percent_Identity=27.0949720670391, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI161083233, Length=352, Percent_Identity=29.8295454545455, Blast_Score=108, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008257 [H]
Pfam domain/function: PF01244 Peptidase_M19 [H]
EC number: NA
Molecular weight: Translated: 37911; Mature: 37911
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFVFDGHNDVLLRLWTHSKDGSDPISEFADGTTVGHIDARRAREGGLSGGLCAIYIPSG CCEEEECCCCEEEEEEECCCCCCCHHHHHCCCCEEECCHHHHHHHCCCCCCEEEEEECCC DLVFADPDADGRYITPMAAPLDPLPSLAIATEMAAIALRLDQAGAWRLCRTVKDIRGAMA CEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DDIFAAVLHMEGCEAIGADLAALEVFYAAGLRSLGPVWSRHNVFGYGVPFAFPMSPDTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCEEECCCCCCCC GLTDAGFALVRECNRLGIVIDLAHITEKGFWDVAKTTDQPLVSSHSNAHALTPVARNLTD CCCHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHCCCCCHHHCCCCCCCHHHHHHCCHH RQLDAIRESRGLVGINYATAMLRPDGRSDSDTPLADMIRHIDYLVNRIGIDCVGLGSDFD HHHHHHHHHCCEEEEEHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCC GATIPEEIGDASGNQKLIAALREVGYGEADLTKLARENWLRILAQAWREDDA CCCCCHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MQFVFDGHNDVLLRLWTHSKDGSDPISEFADGTTVGHIDARRAREGGLSGGLCAIYIPSG CCEEEECCCCEEEEEEECCCCCCCHHHHHCCCCEEECCHHHHHHHCCCCCCEEEEEECCC DLVFADPDADGRYITPMAAPLDPLPSLAIATEMAAIALRLDQAGAWRLCRTVKDIRGAMA CEEEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DDIFAAVLHMEGCEAIGADLAALEVFYAAGLRSLGPVWSRHNVFGYGVPFAFPMSPDTAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCEEECCCCCCCC GLTDAGFALVRECNRLGIVIDLAHITEKGFWDVAKTTDQPLVSSHSNAHALTPVARNLTD CCCHHHHHHHHHHCCCCEEEEHHHHCCCCCCHHHHCCCCCHHHCCCCCCCHHHHHHCCHH RQLDAIRESRGLVGINYATAMLRPDGRSDSDTPLADMIRHIDYLVNRIGIDCVGLGSDFD HHHHHHHHHCCEEEEEHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCCC GATIPEEIGDASGNQKLIAALREVGYGEADLTKLARENWLRILAQAWREDDA CCCCCHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1313537 [H]