Click here to switch to the map view.

The map label for this gene is luxR [H]

Identifier: 209551411

GI number: 209551411

Start: 3974816

End: 3975571

Strand: Reverse

Name: luxR [H]

Synonym: Rleg2_3840

Alternate gene names: 209551411

Gene position: 3975571-3974816 (Counterclockwise)

Preceding gene: 209551415

Following gene: 209551410

Centisome position: 87.61

GC content: 58.47

Gene sequence:

>756_bases
GTGAATATTAATTTGTTAATTCAATTGCTTATAGTTCTGGAAGAATCGCCGAACGCTCGGGCATTGGTGACCGAGTTCGA
ACGGGTGATCGACGATTGCGGCTTCGAATATTACGGCCTGCTGCGCCATTTGCCGCAAAATCCGGCGCAGCGCCATCCGG
AACCCCGGGCCGCGGCGCTTGCCGATCGCTGGCCGGAACAATGGCCGCAAATCTATTCCGCGAAAAAATATGTCATGATC
GATCCGATGGTGCGCTATCTCGCCCATGCGCAGCGGCCTTTCCGCTGGCGGGAAAGCCTGGCGGCCTTCGGCAAGGATGC
GCAGCGCCGCCGCATGGAGCAGATGATGGTCGATGCCTTCGGTCACGGACTGGAAGACGGTTATATCTTTCCCGTCCACG
GACGGAACGGCATTCTCGGCAGCCTGAGTCTCGCCGGCAAACCTGTCGAGCTGTCGCCGGTGGAGATCGCCCTGTTTGAG
GCGGTGGCACGCAAGAGCTTCTGGCGAATGCTCGAACTGAAGGACGAGGCGCAGGCGCTGGAAACCGTGCTGCCGGCCGA
CACGCCCCTGACGCGACGTGAAATGGAGATCCTGCATTATCTCGCCGAAGGCATGACCTCGATGGAAATCGGCAAGGTGC
TGAAGATCTCAAACCACACCGTCGACTGGTATATGAACGGCTTGCAGAACAAGCTGAAGGCGAAAAACCGGCAACAGGCG
GTGGCGCTTGCCTTCCGTCACCGGCTGATAAGCTAA

Upstream 100 bases:

>100_bases
AATTAGAGACTGCATTTTTTGAGAAGACCGTTTCGCGACCCATTTGACAAGCCGCCGACGGCCTCGGATGCGGGCGTCAC
GTCCGGGCAAGGGGCATTTT

Downstream 100 bases:

>100_bases
AGCATCATGCTGGCAACATAAGCGATTTCTATAATACCTCTTTGATTTCGATAAGGATTCTGATCCAGGTCGAGCCGATC
TGGCATTATTCGTATCCAGA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNINLLIQLLIVLEESPNARALVTEFERVIDDCGFEYYGLLRHLPQNPAQRHPEPRAAALADRWPEQWPQIYSAKKYVMI
DPMVRYLAHAQRPFRWRESLAAFGKDAQRRRMEQMMVDAFGHGLEDGYIFPVHGRNGILGSLSLAGKPVELSPVEIALFE
AVARKSFWRMLELKDEAQALETVLPADTPLTRREMEILHYLAEGMTSMEIGKVLKISNHTVDWYMNGLQNKLKAKNRQQA
VALAFRHRLIS

Sequences:

>Translated_251_residues
MNINLLIQLLIVLEESPNARALVTEFERVIDDCGFEYYGLLRHLPQNPAQRHPEPRAAALADRWPEQWPQIYSAKKYVMI
DPMVRYLAHAQRPFRWRESLAAFGKDAQRRRMEQMMVDAFGHGLEDGYIFPVHGRNGILGSLSLAGKPVELSPVEIALFE
AVARKSFWRMLELKDEAQALETVLPADTPLTRREMEILHYLAEGMTSMEIGKVLKISNHTVDWYMNGLQNKLKAKNRQQA
VALAFRHRLIS
>Mature_251_residues
MNINLLIQLLIVLEESPNARALVTEFERVIDDCGFEYYGLLRHLPQNPAQRHPEPRAAALADRWPEQWPQIYSAKKYVMI
DPMVRYLAHAQRPFRWRESLAAFGKDAQRRRMEQMMVDAFGHGLEDGYIFPVHGRNGILGSLSLAGKPVELSPVEIALFE
AVARKSFWRMLELKDEAQALETVLPADTPLTRREMEILHYLAEGMTSMEIGKVLKISNHTVDWYMNGLQNKLKAKNRQQA
VALAFRHRLIS

Specific function: Transcriptional activator of the bioluminescence operon. Binds to the OHHL autoinducer [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=249, Percent_Identity=28.1124497991968, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 28891; Mature: 28891

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINLLIQLLIVLEESPNARALVTEFERVIDDCGFEYYGLLRHLPQNPAQRHPEPRAAAL
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCCCHHHHH
ADRWPEQWPQIYSAKKYVMIDPMVRYLAHAQRPFRWRESLAAFGKDAQRRRMEQMMVDAF
HHHCHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
GHGLEDGYIFPVHGRNGILGSLSLAGKPVELSPVEIALFEAVARKSFWRMLELKDEAQAL
CCCCCCCEEEEECCCCCCEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVLPADTPLTRREMEILHYLAEGMTSMEIGKVLKISNHTVDWYMNGLQNKLKAKNRQQA
HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VALAFRHRLIS
HHHHHHHHHCC
>Mature Secondary Structure
MNINLLIQLLIVLEESPNARALVTEFERVIDDCGFEYYGLLRHLPQNPAQRHPEPRAAAL
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHCCCCCHHHHH
ADRWPEQWPQIYSAKKYVMIDPMVRYLAHAQRPFRWRESLAAFGKDAQRRRMEQMMVDAF
HHHCHHHHHHHHCCCCEEEECHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
GHGLEDGYIFPVHGRNGILGSLSLAGKPVELSPVEIALFEAVARKSFWRMLELKDEAQAL
CCCCCCCEEEEECCCCCCEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVLPADTPLTRREMEILHYLAEGMTSMEIGKVLKISNHTVDWYMNGLQNKLKAKNRQQA
HHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
VALAFRHRLIS
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA