Click here to switch to the map view.

The map label for this gene is 209551394

Identifier: 209551394

GI number: 209551394

Start: 3957363

End: 3957935

Strand: Direct

Name: 209551394

Synonym: Rleg2_3823

Alternate gene names: NA

Gene position: 3957363-3957935 (Clockwise)

Preceding gene: 209551391

Following gene: 209551400

Centisome position: 87.21

GC content: 56.89

Gene sequence:

>573_bases
ATGGCGAAGCATGAGGGTCAGATAGTCATCAAGAAATACGCCAATCGCCGGCTATACAATACGGGCACCAGCACCTACGT
CACGCTGGAAGACCTGGCGGAGATGGTGAAGAAGGGCGAGGAATTTACCGTCCAGGATGCAAAAAGCGGAGATGACATCA
CTCATTCGGTGCTGACCCAGATCATCTTCGAGCAGGAATCGAAGACCGGCAACACGCTTCTCCCGATCTCCTTCCTGCGC
CAGCTCATCACCTATTACGGCGACCAGATGCAGATGGTCGTGCCGAGCTTTCTCGAACATTCGATGCGCGCCTTCAGCGA
ACAGCAGTCCCAGATGCGAGAGCAGGTGAACCGCGCCTTCGGCGAAACACCGCTCGGCAAGAACCTGCAACTGCCGATGC
AGATGGTCGAGGACCAGGTTCGCCGCAACACCGAGCTGTTTCAGCAGGCGATGCAGATGTTCTCGCCCTTCATGACGCCG
CCGGCCAAGGAAAGCCGCAAGGCCGAGGCCAAGGATATCGATGAGCTGAAGGAACAGCTCCGCGCCCTTCAGAACAAGCT
CGACAACCTATAA

Upstream 100 bases:

>100_bases
TTGCCGCATCGCACAAAGAGATTGTCACCGGCCTTCTTTTGCGTTTACAGTCTGAAGTGGAGGAATATCCATAATTCAGA
CGGGGGTCCAGGAGACTGAT

Downstream 100 bases:

>100_bases
TCCGATCGAGACATCCCGCCCGGCGCTCCGGATCGACACGGCAAACCCGCCGATCACATCGATCAGAGCGATCGTCATCA
AAATGAAGAAGACCTGCGTC

Product: polyhydroxyalkonate synthesis repressor, PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MAKHEGQIVIKKYANRRLYNTGTSTYVTLEDLAEMVKKGEEFTVQDAKSGDDITHSVLTQIIFEQESKTGNTLLPISFLR
QLITYYGDQMQMVVPSFLEHSMRAFSEQQSQMREQVNRAFGETPLGKNLQLPMQMVEDQVRRNTELFQQAMQMFSPFMTP
PAKESRKAEAKDIDELKEQLRALQNKLDNL

Sequences:

>Translated_190_residues
MAKHEGQIVIKKYANRRLYNTGTSTYVTLEDLAEMVKKGEEFTVQDAKSGDDITHSVLTQIIFEQESKTGNTLLPISFLR
QLITYYGDQMQMVVPSFLEHSMRAFSEQQSQMREQVNRAFGETPLGKNLQLPMQMVEDQVRRNTELFQQAMQMFSPFMTP
PAKESRKAEAKDIDELKEQLRALQNKLDNL
>Mature_189_residues
AKHEGQIVIKKYANRRLYNTGTSTYVTLEDLAEMVKKGEEFTVQDAKSGDDITHSVLTQIIFEQESKTGNTLLPISFLRQ
LITYYGDQMQMVVPSFLEHSMRAFSEQQSQMREQVNRAFGETPLGKNLQLPMQMVEDQVRRNTELFQQAMQMFSPFMTPP
AKESRKAEAKDIDELKEQLRALQNKLDNL

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 21943; Mature: 21812

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHEGQIVIKKYANRRLYNTGTSTYVTLEDLAEMVKKGEEFTVQDAKSGDDITHSVLTQ
CCCCCCHHHHHHHHCCHHCCCCCCCEEEHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHH
IIFEQESKTGNTLLPISFLRQLITYYGDQMQMVVPSFLEHSMRAFSEQQSQMREQVNRAF
HHHHHCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GETPLGKNLQLPMQMVEDQVRRNTELFQQAMQMFSPFMTPPAKESRKAEAKDIDELKEQL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH
RALQNKLDNL
HHHHHHHCCC
>Mature Secondary Structure 
AKHEGQIVIKKYANRRLYNTGTSTYVTLEDLAEMVKKGEEFTVQDAKSGDDITHSVLTQ
CCCCCHHHHHHHHCCHHCCCCCCCEEEHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHH
IIFEQESKTGNTLLPISFLRQLITYYGDQMQMVVPSFLEHSMRAFSEQQSQMREQVNRAF
HHHHHCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GETPLGKNLQLPMQMVEDQVRRNTELFQQAMQMFSPFMTPPAKESRKAEAKDIDELKEQL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHH
RALQNKLDNL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]