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The map label for this gene is hslR [C]

Identifier: 209551387

GI number: 209551387

Start: 3949797

End: 3950201

Strand: Reverse

Name: hslR [C]

Synonym: Rleg2_3816

Alternate gene names: 209551387

Gene position: 3950201-3949797 (Counterclockwise)

Preceding gene: 209551388

Following gene: 209551386

Centisome position: 87.05

GC content: 66.42

Gene sequence:

>405_bases
ATGAGCGGGGAGACACAGCCGACAAGCGGTTCGCGCCAGCGCATCGACAAGTGGCTGTTCTTCGCGCGCATGGTGAAGTC
GCGCTCGCTGGCGCAGAGCCATGTCCAATCGGGCCATGTGCGCGTTAACGGCGAGCGCTGCAAGCATCCGAGCCAGATGG
TCAAGCCGGGCGACCGTATCGAGCTGACGCTGGAGCGGCGCGATGTCGTTCTCGTCATGCGCCTCGCCGGCGAGCGGCGG
GGGCCTTACGAGGAGGCCCGGCTGCTCTACGAGGACCTGTCGCCGCTGCCGGATGAGGCAAAACGCCTCACCCCCTACGA
GCAGGCGATCCGGGCGACCGGCACCGGCCGTCCGACCAAAAAGGAACGACGCGCAATCGACAGGCTGATGTCGGACGAGG
ATTAG

Upstream 100 bases:

>100_bases
TGCGCTTCGAGGCCAAGCCGCCGCGCAAGGAGAAGCCGATCGATCCGGATTCACCTTTCGCCAAGCTTGCGGCTCTCAAG
GAGCAGATGAAGAAGTAATC

Downstream 100 bases:

>100_bases
AAAACTCTGCCCGCGGCCGCGGCTTTTGCAGATCGTTTATCCTTGAAATCCGGCGTTAAAGCCGATACGTCACTGACAAC
CTGCCGGAAGCGTGCTTACC

Product: RNA-binding S4 domain-containing protein

Products: NA

Alternate protein names: S4 Domain-Containing Protein; Ribosome-Associated Heat Shock Protein; S4 Domain Protein; Ribosome-Associated Heat Shock S Subunit; Hsp15 Family Heat Shock Protein; Hsp15-Like Protein; Heat Shock Protein Hsp; Ribosome-Associated Heat Shock Protein Hsp; HEAT Shock-Like Protein; Ribosome-Associated Heat Shock Protein HSP

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSGETQPTSGSRQRIDKWLFFARMVKSRSLAQSHVQSGHVRVNGERCKHPSQMVKPGDRIELTLERRDVVLVMRLAGERR
GPYEEARLLYEDLSPLPDEAKRLTPYEQAIRATGTGRPTKKERRAIDRLMSDED

Sequences:

>Translated_134_residues
MSGETQPTSGSRQRIDKWLFFARMVKSRSLAQSHVQSGHVRVNGERCKHPSQMVKPGDRIELTLERRDVVLVMRLAGERR
GPYEEARLLYEDLSPLPDEAKRLTPYEQAIRATGTGRPTKKERRAIDRLMSDED
>Mature_133_residues
SGETQPTSGSRQRIDKWLFFARMVKSRSLAQSHVQSGHVRVNGERCKHPSQMVKPGDRIELTLERRDVVLVMRLAGERRG
PYEEARLLYEDLSPLPDEAKRLTPYEQAIRATGTGRPTKKERRAIDRLMSDED

Specific function: Involved In The Recycling Of Free 50s Ribosomal Subunits That Still Carry A Nascent Chain. Binds RNA More Specifically Than DNA. Binds With Very High Affinity To The Free 50s Ribosomal Subunit. Does Not Bind It When It Is Part Of The 70s Ribosome. [C]

COG id: COG1188

COG function: function code J; Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15418; Mature: 15287

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS50889 S4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGETQPTSGSRQRIDKWLFFARMVKSRSLAQSHVQSGHVRVNGERCKHPSQMVKPGDRI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHCCCCHHHCCCCCCE
ELTLERRDVVLVMRLAGERRGPYEEARLLYEDLSPLPDEAKRLTPYEQAIRATGTGRPTK
EEEECCCCEEHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCCCH
KERRAIDRLMSDED
HHHHHHHHHHCCCC
>Mature Secondary Structure 
SGETQPTSGSRQRIDKWLFFARMVKSRSLAQSHVQSGHVRVNGERCKHPSQMVKPGDRI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHCCCCHHHCCCCCCE
ELTLERRDVVLVMRLAGERRGPYEEARLLYEDLSPLPDEAKRLTPYEQAIRATGTGRPTK
EEEECCCCEEHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCCCH
KERRAIDRLMSDED
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA