| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551381
Identifier: 209551381
GI number: 209551381
Start: 3942845
End: 3943372
Strand: Reverse
Name: 209551381
Synonym: Rleg2_3810
Alternate gene names: NA
Gene position: 3943372-3942845 (Counterclockwise)
Preceding gene: 209551384
Following gene: 209551380
Centisome position: 86.9
GC content: 64.96
Gene sequence:
>528_bases ATGAATGACGTGCTGACCAAGACCAATTCCCCGGAACCGGCTGCGCCGGATGAGAAAAACGTGCCGCGCATCGGCCGGAG CATGGGGCGCATGCGGTTGATGACCGGGCGGCGGCTGATCGGCCGGCTGGCGATCCAGAGTGCCGCACCGGGCCTGGAAC TTTCGCATCTCGATGTGCTCGACGCCGTGCGCAGGGCGCAGCCTGCCGGCGAAGTCACGGTCGGCATGATCGCGGAGATG CTGCGCATCGATCCGTCACGGGCAAGCCGGGTGGTGGCCGACATGGTCGGGCGTAACGTGCTGCGCCGCGAGGCTTCACA GGCCGATGCCCGGCGGATTGTCGTCGTCATGACCGAGGTCGGCCAGAAACTGCTTGCCGAGATCGTCGCGCAGAAACTCG CGATCATCTCGGAGATCGTCTCCGACTGGCCTGAGGAGGATGTCGATCGCTTCGCTATATTGTTCGAGCGTTTCATCGGC GGCTACGAGGCGGTCTTCCAGTCGCGCGACAAGGAGACGCCGGGCTAG
Upstream 100 bases:
>100_bases GGTTGGTCGCCTTTTATGTGCTGACAGCATATATTTGTCAATGGCACATTAATGACATCGGCATATTCAAAATCCGAAAC GGCTCTGTTATGGTCCGATC
Downstream 100 bases:
>100_bases CTGTTGGATGCGCGGCGTTCGACGGCAAATGGGGCCGATCGAGCCGCGCCCCTTCCCCTCGACCCCTCGTTTGCGCTAAG GGCAATGCCCATGAGCCAAT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Protein MarR Family; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family; MarR-Family Protein Transcriptional Regulator
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MNDVLTKTNSPEPAAPDEKNVPRIGRSMGRMRLMTGRRLIGRLAIQSAAPGLELSHLDVLDAVRRAQPAGEVTVGMIAEM LRIDPSRASRVVADMVGRNVLRREASQADARRIVVVMTEVGQKLLAEIVAQKLAIISEIVSDWPEEDVDRFAILFERFIG GYEAVFQSRDKETPG
Sequences:
>Translated_175_residues MNDVLTKTNSPEPAAPDEKNVPRIGRSMGRMRLMTGRRLIGRLAIQSAAPGLELSHLDVLDAVRRAQPAGEVTVGMIAEM LRIDPSRASRVVADMVGRNVLRREASQADARRIVVVMTEVGQKLLAEIVAQKLAIISEIVSDWPEEDVDRFAILFERFIG GYEAVFQSRDKETPG >Mature_175_residues MNDVLTKTNSPEPAAPDEKNVPRIGRSMGRMRLMTGRRLIGRLAIQSAAPGLELSHLDVLDAVRRAQPAGEVTVGMIAEM LRIDPSRASRVVADMVGRNVLRREASQADARRIVVVMTEVGQKLLAEIVAQKLAIISEIVSDWPEEDVDRFAILFERFIG GYEAVFQSRDKETPG
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19320; Mature: 19320
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVLTKTNSPEPAAPDEKNVPRIGRSMGRMRLMTGRRLIGRLAIQSAAPGLELSHLDVL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DAVRRAQPAGEVTVGMIAEMLRIDPSRASRVVADMVGRNVLRREASQADARRIVVVMTEV HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQKLLAEIVAQKLAIISEIVSDWPEEDVDRFAILFERFIGGYEAVFQSRDKETPG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNDVLTKTNSPEPAAPDEKNVPRIGRSMGRMRLMTGRRLIGRLAIQSAAPGLELSHLDVL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DAVRRAQPAGEVTVGMIAEMLRIDPSRASRVVADMVGRNVLRREASQADARRIVVVMTEV HHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GQKLLAEIVAQKLAIISEIVSDWPEEDVDRFAILFERFIGGYEAVFQSRDKETPG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA