| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551315
Identifier: 209551315
GI number: 209551315
Start: 3870181
End: 3870768
Strand: Reverse
Name: 209551315
Synonym: Rleg2_3744
Alternate gene names: NA
Gene position: 3870768-3870181 (Counterclockwise)
Preceding gene: 209551316
Following gene: 209551309
Centisome position: 85.3
GC content: 59.86
Gene sequence:
>588_bases GTGAGCGCTGCAGACGCCGAATATCGTGTCAGACACCAAAGCTTCTGGTTCGTTGCCTGCCTTGCGGTGCTGGTCGCACA GATCGTCACCGAATATCTGATGGGCCGCGTGCCGATCTGCGCCTGCGGTTATGTCAAGCTGTGGGAGGGCGGGGTCAATA CCAGCGGCAATTCACAGCATCTGTCGGACTGGTACACGCCGTCGCACATCATCCACGGCTTCCTGTTCTACGGGCTCGGC CATCTCGTCCTGCGCCGCAAGCCCCTGGCGGCAAAGCTGCTGCTGGCGCTGTTCATCGAATCCGGCTGGGAACTGCTGGA GAATTCTCCTCTGATCATCGACCGCTACCGCACGGCGACGATCGCGCTCGACTATTACGGGGACAGCATTCTGAATTCGG CGATGGACACCGTCTTCATGTGCCTCGGCTTCTTCTTCGCATCGCGGGCGCCGGTGGCGCTGACGGTGGCGATCGCGATC TTCTTCGAGATTTTCACCGGTTATGTGATCCGCGATAATCTGACGTTGAACGTGGTGATGCTGATCTGGCCGGTGGAGGC GATCAAGGTCTGGCAGGGCGGGGTTTAG
Upstream 100 bases:
>100_bases TCAAGGTCTGGGGCACGATGCCGATCACCATCATCTTCACGCTGGCGCAGATGCCGCTGGTGCTCAAACATAGCATCAAC CTGGAAACGGACGGCGAAAA
Downstream 100 bases:
>100_bases CCCCACGTCTTTCTTGACTTACGAAACCGGCTTCCCCAGCGCCTTTTCCATCGCCGGAAACAGCCCTTCCTTCAGGCTGA TATCGTCGAAGGGGCCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MSAADAEYRVRHQSFWFVACLAVLVAQIVTEYLMGRVPICACGYVKLWEGGVNTSGNSQHLSDWYTPSHIIHGFLFYGLG HLVLRRKPLAAKLLLALFIESGWELLENSPLIIDRYRTATIALDYYGDSILNSAMDTVFMCLGFFFASRAPVALTVAIAI FFEIFTGYVIRDNLTLNVVMLIWPVEAIKVWQGGV
Sequences:
>Translated_195_residues MSAADAEYRVRHQSFWFVACLAVLVAQIVTEYLMGRVPICACGYVKLWEGGVNTSGNSQHLSDWYTPSHIIHGFLFYGLG HLVLRRKPLAAKLLLALFIESGWELLENSPLIIDRYRTATIALDYYGDSILNSAMDTVFMCLGFFFASRAPVALTVAIAI FFEIFTGYVIRDNLTLNVVMLIWPVEAIKVWQGGV >Mature_194_residues SAADAEYRVRHQSFWFVACLAVLVAQIVTEYLMGRVPICACGYVKLWEGGVNTSGNSQHLSDWYTPSHIIHGFLFYGLGH LVLRRKPLAAKLLLALFIESGWELLENSPLIIDRYRTATIALDYYGDSILNSAMDTVFMCLGFFFASRAPVALTVAIAIF FEIFTGYVIRDNLTLNVVMLIWPVEAIKVWQGGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0314 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3744_RHILW (B5ZTH0)
Other databases:
- EMBL: CP001191 - RefSeq: YP_002283232.1 - GeneID: 6982506 - GenomeReviews: CP001191_GR - KEGG: rlt:Rleg2_3744 - HOGENOM: HBG299577 - OMA: SHIIHGF - ProtClustDB: PRK00944 - HAMAP: MF_01514 - InterPro: IPR019691
Pfam domain/function: PF10755 DUF2585
EC number: NA
Molecular weight: Translated: 21876; Mature: 21745
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d5f03d0)-; HASH(0x1f2854a4)-; HASH(0x1f564d94)-; HASH(0x1b43698c)-;
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAADAEYRVRHQSFWFVACLAVLVAQIVTEYLMGRVPICACGYVKLWEGGVNTSGNSQH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEECCCCCCCCCCCC LSDWYTPSHIIHGFLFYGLGHLVLRRKPLAAKLLLALFIESGWELLENSPLIIDRYRTAT CHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEE IALDYYGDSILNSAMDTVFMCLGFFFASRAPVALTVAIAIFFEIFTGYVIRDNLTLNVVM EEEEHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCEEEEEE LIWPVEAIKVWQGGV EEEHHHHHHHCCCCH >Mature Secondary Structure SAADAEYRVRHQSFWFVACLAVLVAQIVTEYLMGRVPICACGYVKLWEGGVNTSGNSQH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHEECCCCCCCCCCCC LSDWYTPSHIIHGFLFYGLGHLVLRRKPLAAKLLLALFIESGWELLENSPLIIDRYRTAT CHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEE IALDYYGDSILNSAMDTVFMCLGFFFASRAPVALTVAIAIFFEIFTGYVIRDNLTLNVVM EEEEHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEECCCEEEEEE LIWPVEAIKVWQGGV EEEHHHHHHHCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA