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The map label for this gene is cycY [H]

Identifier: 209551314

GI number: 209551314

Start: 3869554

End: 3870162

Strand: Direct

Name: cycY [H]

Synonym: Rleg2_3743

Alternate gene names: 209551314

Gene position: 3869554-3870162 (Clockwise)

Preceding gene: 209551313

Following gene: 209551321

Centisome position: 85.27

GC content: 61.74

Gene sequence:

>609_bases
ATGAGCGAGACGCCCGAAACCGGAACCACCAAGCCGCGCGGCCTTGGCCGTTATGCACTGGCGCTTCTGCCGCTGATCGT
CTTCGGCGGTATCGCGGCAACGGCCGCAAAGATGCTCTACGACCAGGATTTCCACGGCAAGAACATTGCCGAAATCCCCT
CCGCCCTGATCGGCACCAAGGCGCCGGCGCTGAACCTGCCGCCGCTCGATGGCGCCAACCTGCCGGCGCTGACCGACGCG
GCAATCAAGGGCAAGCTGACCCTCGTCAACGTCTTCGCCTCGTGGTGCATCCCCTGCCGGGACGAACATCCTATTTTGAA
AGAACTGGCCAAGGACCCACGGCTGAACATCGTCGCCATCAATTACAAGGATAAGAGCGACAACGCCCTGCGTTTCCTTG
GCGAGCTCGGCAATCCCTATCAGGCGATCGGCATTGATCCCAACGGCAAGGCGGCGATCGACTGGGGCGTCTACGGCATT
CCGGAAAGCTATCTCGTCGGCCCCGACGGCACGATCCTCTACAAGCGCGTCGGCCCCTTCGACGATATCAGCCTGAAGGA
AGGGCTGTTTCCGGCGATGGAAAAGGCGCTGGGGAAGCCGGTTTCGTAA

Upstream 100 bases:

>100_bases
CGCTCTGGACCTGGGCCGATGGCCGGGCCCGCCGCCGGGAACTCGCAGCGCTCGAAGCCGCCGGCATCCGCCGCCGTTCG
GCCCGCAAAAGGGATAGCGA

Downstream 100 bases:

>100_bases
GTCAAGAAAGACGTGGGGCTAAACCCCGCCCTGCCAGACCTTGATCGCCTCCACCGGCCAGATCAGCATCACCACGTTCA
ACGTCAGATTATCGCGGATC

Product: periplasmic protein thiol/disulfide oxidoreductase DsbE

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CycY [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSETPETGTTKPRGLGRYALALLPLIVFGGIAATAAKMLYDQDFHGKNIAEIPSALIGTKAPALNLPPLDGANLPALTDA
AIKGKLTLVNVFASWCIPCRDEHPILKELAKDPRLNIVAINYKDKSDNALRFLGELGNPYQAIGIDPNGKAAIDWGVYGI
PESYLVGPDGTILYKRVGPFDDISLKEGLFPAMEKALGKPVS

Sequences:

>Translated_202_residues
MSETPETGTTKPRGLGRYALALLPLIVFGGIAATAAKMLYDQDFHGKNIAEIPSALIGTKAPALNLPPLDGANLPALTDA
AIKGKLTLVNVFASWCIPCRDEHPILKELAKDPRLNIVAINYKDKSDNALRFLGELGNPYQAIGIDPNGKAAIDWGVYGI
PESYLVGPDGTILYKRVGPFDDISLKEGLFPAMEKALGKPVS
>Mature_201_residues
SETPETGTTKPRGLGRYALALLPLIVFGGIAATAAKMLYDQDFHGKNIAEIPSALIGTKAPALNLPPLDGANLPALTDAA
IKGKLTLVNVFASWCIPCRDEHPILKELAKDPRLNIVAINYKDKSDNALRFLGELGNPYQAIGIDPNGKAAIDWGVYGIP
ESYLVGPDGTILYKRVGPFDDISLKEGLFPAMEKALGKPVS

Specific function: Required for disulfide bond formation in some periplasmic proteins. Also act as a disulfide oxidoreductase in cytochromes c biogenesis. The cysteines of apocytochromes c must be in the reduced state for covalent linkage between the two moieties to occur [

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=174, Percent_Identity=37.3563218390805, Blast_Score=112, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 21567; Mature: 21436

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETPETGTTKPRGLGRYALALLPLIVFGGIAATAAKMLYDQDFHGKNIAEIPSALIGTK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
APALNLPPLDGANLPALTDAAIKGKLTLVNVFASWCIPCRDEHPILKELAKDPRLNIVAI
CCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEE
NYKDKSDNALRFLGELGNPYQAIGIDPNGKAAIDWGVYGIPESYLVGPDGTILYKRVGPF
EECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEECCEECCCCCEEECCCCEEEEEECCCC
DDISLKEGLFPAMEKALGKPVS
CCCCHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SETPETGTTKPRGLGRYALALLPLIVFGGIAATAAKMLYDQDFHGKNIAEIPSALIGTK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCC
APALNLPPLDGANLPALTDAAIKGKLTLVNVFASWCIPCRDEHPILKELAKDPRLNIVAI
CCCCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEEEEE
NYKDKSDNALRFLGELGNPYQAIGIDPNGKAAIDWGVYGIPESYLVGPDGTILYKRVGPF
EECCCCCHHHHHHHHCCCCEEEEEECCCCCEEEECCEECCCCCEEECCCCEEEEEECCCC
DDISLKEGLFPAMEKALGKPVS
CCCCHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8021193 [H]