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The map label for this gene is ybdA [C]

Identifier: 209551277

GI number: 209551277

Start: 3832839

End: 3834074

Strand: Reverse

Name: ybdA [C]

Synonym: Rleg2_3705

Alternate gene names: 209551277

Gene position: 3834074-3832839 (Counterclockwise)

Preceding gene: 209551280

Following gene: 209551270

Centisome position: 84.49

GC content: 64.24

Gene sequence:

>1236_bases
ATGTCGTTTTCGCCCACCGGAGACCGTTTTGCCGCGTTCCGGCATTCGTCCTACACGCGGTTCTTTTTCGCGCGCTTCCT
GCTGTCCTTCTCGCAGCAGATCGTCAGCGTCGCTGTCGGCTGGCAGATGTACGACCAGACGGGCAAGGCGATTTATCTCG
GCCTGATCGGTCTCGTGCAGTTCCTGCCGTCGCTGCTGCTCATGCTGGTCACCGGCTCGGTGGCCGACCGGTACAATCGC
CGGGCAATCGCCGCCCTCTGCTCGCTGGTGAGTGCGCTCTGCACGCTGGCGCTGCTGATCATGACGGTAATGGGGACCTT
CACGCCCCTGCCGGTTTTCGCCGTGCTTCTGATCTTCGGCATCGAACGCGCCTTCATGTCGCCGGCCGTGCAGTCTCTCG
CGCCCAACCTCGTGCCGGAGCATGCGCTGTCGAATGCGATCGCCTGGAATTCGTCGTCCTGGCAGCTCGCGGCGATCACC
GGGCCGGTGATCGGCGGTCTGCTCTACGGCGTCAGCGCGACGACCGCCTATACGGTGGCGGTGATCTTTTCCATCCTCGG
CGCGGCTCTTCTCTACATGATCCCGAAGCCGGAACAGAAGACGACGGGCGAGGCCAAGAGCTGGGCGATGATCCTCGGCG
GCTTCAGTTTCATCCGCGCCGAGAAGGTGGTGCTCGGGGCGATCTCGCTCGATCTCTTTGCCGTGCTGCTCGGCGGCGCG
ACGGCACTGATGCCGATCTTCGCCCGCGATATCCTGACGCTCGGCCCCTGGGGGCTTGGCCTGCTGCGCGCGGCACCTGG
GCTCGGCGCCATCGTCATGGCGATCTTCCTTGCCGCCTATCCGCTCAAACACCGCGCCGGCATCTACATGTTCATCGGTG
TTGCGCTGTTCGGCCTGGGAACCATCGTCTTCGGCATGTCGACCAACACAGAAGTCTCGATCGCCGCACTTGCGCTGATG
GGGGCGGCCGACATGGTGTCGGTCTATGTACGAGAGAGCCTGATTGCGCTCTGGACGCCGGATCAGCTGCGCGGCCGCGT
CAATGCGGTCAACATGGTCTTCGTCGGCGCTTCGAACGAACTCGGCGAGTTCAGGGCGGGCACGATGGCATCGATCTTCG
GCGCGGTGCCGGCGGTCGTTATCGGCGGGCTCGGGACTTTGGCGGTGGCGGCGATCTGGGCTTCGAGTTTCCCCAAATTG
CGCAGGATCGATACGCTTGACGCGCCCAGCACGTGA

Upstream 100 bases:

>100_bases
GGCGACTAAACGAGCAAGTGCCGTGTGGGAACGCGCGGTGAATCATGTTTAACGGGCGGCCTTGCAGCTATTCCCGCGCC
CGTTTCCTCGGAAAACATCC

Downstream 100 bases:

>100_bases
GATAGCGCGGATACGCGATCTCTACGCGGGAAGTGTGATCGAAGAGGCGGCCTTTGCCGGTTTGCCTTCGAAGACGATAT
CGAGGAATTCGGTCAGCCAG

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; MFS Permease; DrugProton Antiporter; Membrane Transporter; Transporter Facilitator Family; Transmembrane Protein; Permease Of Facilitator Superfamily; MFS Family Transporter; Facilitator Superfamily; Facilitator MFS1 Protein; Permease Facilitator Superfamily; Macrolide-Efflux Protein; Facilitator Superfamily Transporter Permease; Permease Protein; Facilitator Superfamily Multidrug Resistance Protein; Permeases Of Facilitator Superfamily; Permease MDR ; Facilitator Superfamily Transmembrane Transporter; Arabinose Efflux Permease; Integral Membrane Efflux Protein; Drug Proton Antiporter; Integral Membrane Protein MFS Transporter; Integral Membrane Protein; Membrame Protein; Facilitator Superfamily Multidrug Efflux Transporter; DrugH+ Antiporter; Facilitator Family Transporter; Drug Resistance Efflux Protein; Facilitator Superfamily Transporter Transporter

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSFSPTGDRFAAFRHSSYTRFFFARFLLSFSQQIVSVAVGWQMYDQTGKAIYLGLIGLVQFLPSLLLMLVTGSVADRYNR
RAIAALCSLVSALCTLALLIMTVMGTFTPLPVFAVLLIFGIERAFMSPAVQSLAPNLVPEHALSNAIAWNSSSWQLAAIT
GPVIGGLLYGVSATTAYTVAVIFSILGAALLYMIPKPEQKTTGEAKSWAMILGGFSFIRAEKVVLGAISLDLFAVLLGGA
TALMPIFARDILTLGPWGLGLLRAAPGLGAIVMAIFLAAYPLKHRAGIYMFIGVALFGLGTIVFGMSTNTEVSIAALALM
GAADMVSVYVRESLIALWTPDQLRGRVNAVNMVFVGASNELGEFRAGTMASIFGAVPAVVIGGLGTLAVAAIWASSFPKL
RRIDTLDAPST

Sequences:

>Translated_411_residues
MSFSPTGDRFAAFRHSSYTRFFFARFLLSFSQQIVSVAVGWQMYDQTGKAIYLGLIGLVQFLPSLLLMLVTGSVADRYNR
RAIAALCSLVSALCTLALLIMTVMGTFTPLPVFAVLLIFGIERAFMSPAVQSLAPNLVPEHALSNAIAWNSSSWQLAAIT
GPVIGGLLYGVSATTAYTVAVIFSILGAALLYMIPKPEQKTTGEAKSWAMILGGFSFIRAEKVVLGAISLDLFAVLLGGA
TALMPIFARDILTLGPWGLGLLRAAPGLGAIVMAIFLAAYPLKHRAGIYMFIGVALFGLGTIVFGMSTNTEVSIAALALM
GAADMVSVYVRESLIALWTPDQLRGRVNAVNMVFVGASNELGEFRAGTMASIFGAVPAVVIGGLGTLAVAAIWASSFPKL
RRIDTLDAPST
>Mature_410_residues
SFSPTGDRFAAFRHSSYTRFFFARFLLSFSQQIVSVAVGWQMYDQTGKAIYLGLIGLVQFLPSLLLMLVTGSVADRYNRR
AIAALCSLVSALCTLALLIMTVMGTFTPLPVFAVLLIFGIERAFMSPAVQSLAPNLVPEHALSNAIAWNSSSWQLAAITG
PVIGGLLYGVSATTAYTVAVIFSILGAALLYMIPKPEQKTTGEAKSWAMILGGFSFIRAEKVVLGAISLDLFAVLLGGAT
ALMPIFARDILTLGPWGLGLLRAAPGLGAIVMAIFLAAYPLKHRAGIYMFIGVALFGLGTIVFGMSTNTEVSIAALALMG
AADMVSVYVRESLIALWTPDQLRGRVNAVNMVFVGASNELGEFRAGTMASIFGAVPAVVIGGLGTLAVAAIWASSFPKLR
RIDTLDAPST

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43510; Mature: 43379

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSPTGDRFAAFRHSSYTRFFFARFLLSFSQQIVSVAVGWQMYDQTGKAIYLGLIGLVQ
CCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FLPSLLLMLVTGSVADRYNRRAIAALCSLVSALCTLALLIMTVMGTFTPLPVFAVLLIFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IERAFMSPAVQSLAPNLVPEHALSNAIAWNSSSWQLAAITGPVIGGLLYGVSATTAYTVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
VIFSILGAALLYMIPKPEQKTTGEAKSWAMILGGFSFIRAEKVVLGAISLDLFAVLLGGA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TALMPIFARDILTLGPWGLGLLRAAPGLGAIVMAIFLAAYPLKHRAGIYMFIGVALFGLG
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH
TIVFGMSTNTEVSIAALALMGAADMVSVYVRESLIALWTPDQLRGRVNAVNMVFVGASNE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCEEEEEEEECCCC
LGEFRAGTMASIFGAVPAVVIGGLGTLAVAAIWASSFPKLRRIDTLDAPST
CCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
SFSPTGDRFAAFRHSSYTRFFFARFLLSFSQQIVSVAVGWQMYDQTGKAIYLGLIGLVQ
CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
FLPSLLLMLVTGSVADRYNRRAIAALCSLVSALCTLALLIMTVMGTFTPLPVFAVLLIFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IERAFMSPAVQSLAPNLVPEHALSNAIAWNSSSWQLAAITGPVIGGLLYGVSATTAYTVA
HHHHHHHHHHHHHCCCCCHHHHHHHHHEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
VIFSILGAALLYMIPKPEQKTTGEAKSWAMILGGFSFIRAEKVVLGAISLDLFAVLLGGA
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
TALMPIFARDILTLGPWGLGLLRAAPGLGAIVMAIFLAAYPLKHRAGIYMFIGVALFGLG
HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH
TIVFGMSTNTEVSIAALALMGAADMVSVYVRESLIALWTPDQLRGRVNAVNMVFVGASNE
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHCCCCCEEEEEEEECCCC
LGEFRAGTMASIFGAVPAVVIGGLGTLAVAAIWASSFPKLRRIDTLDAPST
CCHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA