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The map label for this gene is pss [H]

Identifier: 209551221

GI number: 209551221

Start: 3778276

End: 3779013

Strand: Direct

Name: pss [H]

Synonym: Rleg2_3649

Alternate gene names: 209551221

Gene position: 3778276-3779013 (Clockwise)

Preceding gene: 209551220

Following gene: 209551230

Centisome position: 83.26

GC content: 59.35

Gene sequence:

>738_bases
ATGAATGCTTTTACTTCGAAGACGAATTCACGCTTCGATCCGTCTCAGCGTCAGGACAAAACCAAGACCCTGGTTATCGC
GAACTCCAACATTCGCCAGCCGGATAGCTTTTCACCTGTCGAAAGAAAGATGGCTGTGCGTCTGGGCGTGAAACGGCTGT
TCGATATCGTCGCCTCACTCAGCGCCCTCATCGTGCTGGCGCCGTTTTTTCTGGCGATCGCTCTCTTCATCAAACTCGAT
GATGGCGGCCCGGTCTTCTTTCGGCAGATCCGCTGGGGACTGAACGGCCGGAAGATCATGGTCTTCAAGTTCCGCTCGAT
GCGCGCCGAAGATTGTGATCCGAGCGGCGTCAAGCAGACCGTCAAGGGTGACAGCCGGATGACCGGTATCGGCGCGCTGC
TCCGACGGACCAACATCGACGAGCTGCCGCAGCTTTTCAATGTCCTCATGGGCGAGATGTCGCTGGTCGGTCCACGCTGC
CATGCAATCAATATGCGTGCGGCCGGCAGGCTCTACGAGGAACTGGTGCCGGACTACCACCAACGCCACATCATGCGCCC
CGGCATCACCGGCCTGGCGCAGACACGCGGCTGGCGTGGCCCGACGGCGCGACCGTTGCAAGCCCGCGCCCGCATCGCCT
GCGATATCTACTATGTCAGGAATTTCAGCCTGTTGCTCGACTTGAAGATTCTGCTGAAGACGCTCGTCATCGAGCTGCGT
GGCGGCACCGGCTTCTGA

Upstream 100 bases:

>100_bases
GGTTACGAATTTCTTTTTTATACCCATGACAAACGTTACGTGACCATGTATCTGTCTCCCGGTAGTTCAGTATCGCATCT
AAACTTGTGGACCTTGCGTA

Downstream 100 bases:

>100_bases
GACGATCCGGCACGTCGGCAAAGCGGCCGCCTCTTTGTTTGAATCCGCCGACGGACATTGCCCGCCGAATCCCGAGAGAT
GAGCAGATACAAAAAAGGCG

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNAFTSKTNSRFDPSQRQDKTKTLVIANSNIRQPDSFSPVERKMAVRLGVKRLFDIVASLSALIVLAPFFLAIALFIKLD
DGGPVFFRQIRWGLNGRKIMVFKFRSMRAEDCDPSGVKQTVKGDSRMTGIGALLRRTNIDELPQLFNVLMGEMSLVGPRC
HAINMRAAGRLYEELVPDYHQRHIMRPGITGLAQTRGWRGPTARPLQARARIACDIYYVRNFSLLLDLKILLKTLVIELR
GGTGF

Sequences:

>Translated_245_residues
MNAFTSKTNSRFDPSQRQDKTKTLVIANSNIRQPDSFSPVERKMAVRLGVKRLFDIVASLSALIVLAPFFLAIALFIKLD
DGGPVFFRQIRWGLNGRKIMVFKFRSMRAEDCDPSGVKQTVKGDSRMTGIGALLRRTNIDELPQLFNVLMGEMSLVGPRC
HAINMRAAGRLYEELVPDYHQRHIMRPGITGLAQTRGWRGPTARPLQARARIACDIYYVRNFSLLLDLKILLKTLVIELR
GGTGF
>Mature_245_residues
MNAFTSKTNSRFDPSQRQDKTKTLVIANSNIRQPDSFSPVERKMAVRLGVKRLFDIVASLSALIVLAPFFLAIALFIKLD
DGGPVFFRQIRWGLNGRKIMVFKFRSMRAEDCDPSGVKQTVKGDSRMTGIGALLRRTNIDELPQLFNVLMGEMSLVGPRC
HAINMRAAGRLYEELVPDYHQRHIMRPGITGLAQTRGWRGPTARPLQARARIACDIYYVRNFSLLLDLKILLKTLVIELR
GGTGF

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=186, Percent_Identity=44.6236559139785, Blast_Score=162, Evalue=2e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 27638; Mature: 27638

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFTSKTNSRFDPSQRQDKTKTLVIANSNIRQPDSFSPVERKMAVRLGVKRLFDIVASL
CCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SALIVLAPFFLAIALFIKLDDGGPVFFRQIRWGLNGRKIMVFKFRSMRAEDCDPSGVKQT
HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHH
VKGDSRMTGIGALLRRTNIDELPQLFNVLMGEMSLVGPRCHAINMRAAGRLYEELVPDYH
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCHHH
QRHIMRPGITGLAQTRGWRGPTARPLQARARIACDIYYVRNFSLLLDLKILLKTLVIELR
HHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCC
GGTGF
CCCCC
>Mature Secondary Structure
MNAFTSKTNSRFDPSQRQDKTKTLVIANSNIRQPDSFSPVERKMAVRLGVKRLFDIVASL
CCCCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
SALIVLAPFFLAIALFIKLDDGGPVFFRQIRWGLNGRKIMVFKFRSMRAEDCDPSGVKQT
HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHH
VKGDSRMTGIGALLRRTNIDELPQLFNVLMGEMSLVGPRCHAINMRAAGRLYEELVPDYH
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCHHH
QRHIMRPGITGLAQTRGWRGPTARPLQARARIACDIYYVRNFSLLLDLKILLKTLVIELR
HHHCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCC
GGTGF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2851702 [H]