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The map label for this gene is fdhD [H]

Identifier: 209551209

GI number: 209551209

Start: 3764700

End: 3765524

Strand: Reverse

Name: fdhD [H]

Synonym: Rleg2_3635

Alternate gene names: 209551209

Gene position: 3765524-3764700 (Counterclockwise)

Preceding gene: 209551210

Following gene: 209551208

Centisome position: 82.98

GC content: 66.06

Gene sequence:

>825_bases
ATGACATTCCAGACCACCGCCCGTGCTCCCGAAACCGCCCGCCGCAACGGCCTCCTGCACTCCGGCTCTCGCATCGTGCC
GGAAGAAGTGCCGATCGCCTTTTCCTATGGCGGCAGCTCGCATGCGGTGATGATGGCGACGCCCGATGATCTCGAGGATT
TCGCCGTCGGTTTCAGCCTGACCGAAGGGATTATCACCGAACGCACCGAGATAGCGGCCATCGAGATCGTCGAAGGCGAG
CAGGGGATCGATGTGCAGGTGAGCCTTGTCGACGACGTTGCCGATCGACTGCGGGCACGACGCCGCAGCATGGCGGGGCC
GGTCGGCTGCGGGCTCTGCGGCATCGAATCGATCGAGCAGGCGGTGCGGCCGGTGCCGGATGTCTCGGCATCGCCGCTGA
CGTTGTCGCATGCCGATATCGTACGCGCCGTTTCGCTGCTGAACGAGGCACAGCCGCTGCATCGGGAGACGCGGGCGGTG
CACGGCGCCGGCTTCTATCTTCCGGCCAGGGGATTGCTTGCTGTGCGCGAAGATGTCGGCCGGCACAATGCGCTCGACAA
GCTCTGCGGCGCCGTCATCGACGCCGGCGAAAACGGCCGGAACGGCGCCGTCGCCGTGACCAGCCGGCTCTCGGTCGAGA
TGGTGCAGAAGGCGGCGATCCTTGGGTCTCCCGTGCTCATTGCCATTTCAGCGCCGACGGCTCTGGCCATCCGCACGGCC
GAAGAGGCCGGCATGACGCTCGTCGCCCTGGTGCGCGGCGAGGATTTCGAGATTTTCACCCACCCGCACCGCATCTCGCC
TGGAAGCATCGCCGATGTCGCATGA

Upstream 100 bases:

>100_bases
GAATATGACGAGCAGGCACGGCAATCGCGCCGCATCGCGGGCAAGCTCGAGGCAGCGGAGTGAAAATGCGGGGGTGGTTT
GGCAAGAAGGGATTTGCATC

Downstream 100 bases:

>100_bases
TACCAAGACCAAGCTCGTCTATATGGCAAATCAGATTGCCACCTTCTTCAAGAGCCAGCCGGCAAGCGAGGCCGTGGAAG
GGGTCGCCAATCATATCAAC

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTFQTTARAPETARRNGLLHSGSRIVPEEVPIAFSYGGSSHAVMMATPDDLEDFAVGFSLTEGIITERTEIAAIEIVEGE
QGIDVQVSLVDDVADRLRARRRSMAGPVGCGLCGIESIEQAVRPVPDVSASPLTLSHADIVRAVSLLNEAQPLHRETRAV
HGAGFYLPARGLLAVREDVGRHNALDKLCGAVIDAGENGRNGAVAVTSRLSVEMVQKAAILGSPVLIAISAPTALAIRTA
EEAGMTLVALVRGEDFEIFTHPHRISPGSIADVA

Sequences:

>Translated_274_residues
MTFQTTARAPETARRNGLLHSGSRIVPEEVPIAFSYGGSSHAVMMATPDDLEDFAVGFSLTEGIITERTEIAAIEIVEGE
QGIDVQVSLVDDVADRLRARRRSMAGPVGCGLCGIESIEQAVRPVPDVSASPLTLSHADIVRAVSLLNEAQPLHRETRAV
HGAGFYLPARGLLAVREDVGRHNALDKLCGAVIDAGENGRNGAVAVTSRLSVEMVQKAAILGSPVLIAISAPTALAIRTA
EEAGMTLVALVRGEDFEIFTHPHRISPGSIADVA
>Mature_273_residues
TFQTTARAPETARRNGLLHSGSRIVPEEVPIAFSYGGSSHAVMMATPDDLEDFAVGFSLTEGIITERTEIAAIEIVEGEQ
GIDVQVSLVDDVADRLRARRRSMAGPVGCGLCGIESIEQAVRPVPDVSASPLTLSHADIVRAVSLLNEAQPLHRETRAVH
GAGFYLPARGLLAVREDVGRHNALDKLCGAVIDAGENGRNGAVAVTSRLSVEMVQKAAILGSPVLIAISAPTALAIRTAE
EAGMTLVALVRGEDFEIFTHPHRISPGSIADVA

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=262, Percent_Identity=42.7480916030534, Blast_Score=200, Evalue=8e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28882; Mature: 28751

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQTTARAPETARRNGLLHSGSRIVPEEVPIAFSYGGSSHAVMMATPDDLEDFAVGFSL
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHH
TEGIITERTEIAAIEIVEGEQGIDVQVSLVDDVADRLRARRRSMAGPVGCGLCGIESIEQ
HHHHHHCCCEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
AVRPVPDVSASPLTLSHADIVRAVSLLNEAQPLHRETRAVHGAGFYLPARGLLAVREDVG
HHCCCCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCHHHHHHHHC
RHNALDKLCGAVIDAGENGRNGAVAVTSRLSVEMVQKAAILGSPVLIAISAPTALAIRTA
CHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEH
EEAGMTLVALVRGEDFEIFTHPHRISPGSIADVA
HHCCCEEEEEEECCCEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure 
TFQTTARAPETARRNGLLHSGSRIVPEEVPIAFSYGGSSHAVMMATPDDLEDFAVGFSL
CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHH
TEGIITERTEIAAIEIVEGEQGIDVQVSLVDDVADRLRARRRSMAGPVGCGLCGIESIEQ
HHHHHHCCCEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
AVRPVPDVSASPLTLSHADIVRAVSLLNEAQPLHRETRAVHGAGFYLPARGLLAVREDVG
HHCCCCCCCCCCEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCHHHHHHHHC
RHNALDKLCGAVIDAGENGRNGAVAVTSRLSVEMVQKAAILGSPVLIAISAPTALAIRTA
CHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEH
EEAGMTLVALVRGEDFEIFTHPHRISPGSIADVA
HHCCCEEEEEEECCCEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]