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The map label for this gene is yafK [H]

Identifier: 209551176

GI number: 209551176

Start: 3725033

End: 3726262

Strand: Direct

Name: yafK [H]

Synonym: Rleg2_3600

Alternate gene names: 209551176

Gene position: 3725033-3726262 (Clockwise)

Preceding gene: 209551175

Following gene: 209551177

Centisome position: 82.09

GC content: 63.01

Gene sequence:

>1230_bases
ATGCGCATACGTTATTTTGCCTATGTTTCCCTCATGGCGCTGGCTCTGACCGGCTGCAATGACGCGTTGGAAACCGCGCA
GGTCGATCTCTCCAAGGTCAAGAACAAGGTCGAGCAGCCGCTCCCCCCGCATATCCTTGCCGCCATGTCCGCCAAGGGCA
TGGACCGCAATTCGCCGATCATGATCCGCATCTTCAAGGAAGAAGGTGCCATGGAGATATGGAAGGCGAAGACCGACAAC
CGTTTCGACAAGATCGCCGACTACAAGATCTGCGCCTGGTCGGGCCGTCTCGGCCCGAAAGTAAAGACCGGCGACCGGCA
GGCGCCGGAAGGTTTCTACGACCTGACGCGCGCCAACCTGAACCCCAACTCGAAATATTATCTGGCGATCAACACCGGCT
TCCCGAACCGCTACGACGCGGCGAACGGCCGCACCGGCTCCGATCTGATGATCCATGGCGCCTGCTCGTCCTCCGGCTGC
TATTCGATGACCGACCAGCAGGTGCTTGAAATTTACGCCTTCGCCCGCGACGCCTTCAAGGGCGGCCAGGCGACCGTGCA
GCTGCAGGCCTTCCCCTTCCGCATGACGGCGGAAAACATGGTCAAGCATCGCCTCGACTCAAGCTACGACTTCTGGAAGA
TGCTGAAGGTCGGCTACGACAATTTCGAAGTGACGAAGCGCCCGCCCGAGGTGGCCGTCTGCGAGAAGAAATACGTCTTC
AACCAGCAGGCAACCGATGGCGGCGCCTTCAATGCCGCCGGCAAATGCCCTGCCATGTCGACGCCGCCGGCGCTGACGGC
AGCCCTTGCCTCCTACGGCAAGACCTATGATGCCGACTATGCCAAGGCGATGAGCAAATTCGACGGCATGGCCTGGTACG
ATCCGTCCGAAGCCGAGCGCAAGGCCGTGGTCGCAAAGACCCGCAAGGGCCGCGAACTCGCTTATGCCCCGACCGGCACC
TCGCTCGAAGCCGGCCGCATGGTCAAGGTCGCCGAACTCGAAGACCTGATGGCCAAGCGCACCGCGCAAGGCATTGCCGC
CAAGACGGCGCCGGGCGCCACGCCTGTTGCTGCGCAGACGCAGACGCAGCCAATGGCCGTCGCTGCCGCGACGCCCGCGG
CCGTGCCGGTGCCGGTGCCGAACCCGCTGGCCTATACGGCGCCCGAGCCGCAGGAAACCGCCGAAGCCGCGGCAAAGAAG
CCGTTCTGGAAATTCTGGGCGCGGAACTGA

Upstream 100 bases:

>100_bases
AGGCTGGTAAGGATTTATAAAGTATAAGCCGCCTATGATTCCGTCTGATGCCCGAACTCCATAGGCGGACCGGGTCGCAT
TATCTTTATGGGCTATTTGG

Downstream 100 bases:

>100_bases
ACGGCTTGAACCCCGTTCTTTACGATCTCCGCGGCCTGAAATGCCCCTTTCCCGTGATCAAGACACGCAAGAAGCTTGCC
GCCATGGCAAGCGGCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPIMIRIFKEEGAMEIWKAKTDN
RFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANLNPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGC
YSMTDQQVLEIYAFARDAFKGGQATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF
NQQATDGGAFNAAGKCPAMSTPPALTAALASYGKTYDADYAKAMSKFDGMAWYDPSEAERKAVVAKTRKGRELAYAPTGT
SLEAGRMVKVAELEDLMAKRTAQGIAAKTAPGATPVAAQTQTQPMAVAAATPAAVPVPVPNPLAYTAPEPQETAEAAAKK
PFWKFWARN

Sequences:

>Translated_409_residues
MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPIMIRIFKEEGAMEIWKAKTDN
RFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANLNPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGC
YSMTDQQVLEIYAFARDAFKGGQATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF
NQQATDGGAFNAAGKCPAMSTPPALTAALASYGKTYDADYAKAMSKFDGMAWYDPSEAERKAVVAKTRKGRELAYAPTGT
SLEAGRMVKVAELEDLMAKRTAQGIAAKTAPGATPVAAQTQTQPMAVAAATPAAVPVPVPNPLAYTAPEPQETAEAAAKK
PFWKFWARN
>Mature_409_residues
MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPIMIRIFKEEGAMEIWKAKTDN
RFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANLNPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGC
YSMTDQQVLEIYAFARDAFKGGQATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF
NQQATDGGAFNAAGKCPAMSTPPALTAALASYGKTYDADYAKAMSKFDGMAWYDPSEAERKAVVAKTRKGRELAYAPTGT
SLEAGRMVKVAELEDLMAKRTAQGIAAKTAPGATPVAAQTQTQPMAVAAATPAAVPVPVPNPLAYTAPEPQETAEAAAKK
PFWKFWARN

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1786418, Length=185, Percent_Identity=48.6486486486487, Blast_Score=197, Evalue=9e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 44737; Mature: 44737

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI
CEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCE
MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL
EEEEECCCCCEEEECCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC
NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK
CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
GGQATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF
CCCEEEEEEECCEEECHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCEEEECHHHHC
NQQATDGGAFNAAGKCPAMSTPPALTAALASYGKTYDADYAKAMSKFDGMAWYDPSEAER
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCHHHH
KAVVAKTRKGRELAYAPTGTSLEAGRMVKVAELEDLMAKRTAQGIAAKTAPGATPVAAQT
HHHHHHCCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCEECCCCCCCCCCCCC
QTQPMAVAAATPAAVPVPVPNPLAYTAPEPQETAEAAAKKPFWKFWARN
CCCCEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MRIRYFAYVSLMALALTGCNDALETAQVDLSKVKNKVEQPLPPHILAAMSAKGMDRNSPI
CEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCE
MIRIFKEEGAMEIWKAKTDNRFDKIADYKICAWSGRLGPKVKTGDRQAPEGFYDLTRANL
EEEEECCCCCEEEECCCCCCCHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCC
NPNSKYYLAINTGFPNRYDAANGRTGSDLMIHGACSSSGCYSMTDQQVLEIYAFARDAFK
CCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCC
GGQATVQLQAFPFRMTAENMVKHRLDSSYDFWKMLKVGYDNFEVTKRPPEVAVCEKKYVF
CCCEEEEEEECCEEECHHHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCEEEECHHHHC
NQQATDGGAFNAAGKCPAMSTPPALTAALASYGKTYDADYAKAMSKFDGMAWYDPSEAER
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCHHHH
KAVVAKTRKGRELAYAPTGTSLEAGRMVKVAELEDLMAKRTAQGIAAKTAPGATPVAAQT
HHHHHHCCCCCEEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHCCEECCCCCCCCCCCCC
QTQPMAVAAATPAAVPVPVPNPLAYTAPEPQETAEAAAKKPFWKFWARN
CCCCEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]