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The map label for this gene is yfjD [H]

Identifier: 209551170

GI number: 209551170

Start: 3719469

End: 3720779

Strand: Reverse

Name: yfjD [H]

Synonym: Rleg2_3594

Alternate gene names: 209551170

Gene position: 3720779-3719469 (Counterclockwise)

Preceding gene: 209551171

Following gene: 209551168

Centisome position: 81.99

GC content: 63.16

Gene sequence:

>1311_bases
ATGTCCGTCGAAGGCGCTCTGGCATTTCTTGCGACATATTGGCCGGAGATCCTTTCGATCACGGCGCTCGTGCTGATGTC
CGCCTTCTTTTCCGGCTCGGAAACCGCGCTGACCGCCGTGTCGCGCAGCCGCATCCATACGCTCGAGGTCAACGGCGACG
AACGCGCCGGCCTCGTCCGGCAACTGATCGAGCGGCGCGACCGGTTGATCGGCGCGCTGCTGATCGGCAATAATCTCGCC
AATATCCTGTCCTCGTCGATCGCCACCAGCCTGTTCCTCGGGCTGTTCGGCAGTTCCGGCGTGGCGCTGGCGACGCTGGC
GATGACCGTCATCCTCGTCATCTTCGCCGAAGTGCTGCCGAAGAGCTGGGCGATTTCGACACCCGACCGTTTCGCGCTTG
CGATCGCCGTTCCCGCCAGGCTCTTCGTTCTCGTCGTCGGCCCGATTTCCTCCTTCGTCAATGCGATCGTCCGGCGGATC
CTGGCGCTGTTCGGCATCAATCTCTCACGCGAGGTATCGATGCTGACGGCGCATGAGGAGCTGCGCGGCGCCGTCGACCT
GCTGCACCGCGAGGGATCGGTGGTGAAAGCCGACCGCGACCGGCTGGGCGGCGTGCTCGATCTCGGCGAGCTCGAACTCT
CAGACATCATGGTCCACCGCACGGCGATGCGGGCGATCAACGCCGACGATCCGCCTGAGGCGGTGGTGCGCGCCATTCTC
GAAAGTCCCTATACGCGCATGCCTTTATGGCGCGGCACGATCGACAACATCATCGGCGTCGTTCACGCCAAGGATCTGCT
GCGGGCGCTGGCCGAGCCGAACATGGAGCCGCAGAACCTCGATATCGTGAAGATCGCGCAGAAGCCGTGGTTCGTGCCCG
ACAGCACCAACCTCGAAGATCAGCTGAACGCCTTCCTGCGCCGCAAGCAGCATTTCGCCGTCGTCGTCGACGAATATGGC
GAGGTGCAGGGCATCGTCACGCTGGAGGATATTCTCGAGGAAATCGTCGGCGATATTTCCGATGAGCACGATATCGAGAT
CCAGGGTGTGCGCCAGGAGGCCGACGGTTCGGTCGTGGTCGACGGCGGCGTGCCGATCCGCGACTTGAACCGCGCGCTCG
ACTGGAACCTGCCCGATGAGGAGGCGACGACGATTGCCGGCCTGGTCATCCATGAATCGATGACCATTCCGGAAGAGCGC
CAGGCCTTCACCTTTTACGGCAAGCGCTTCATCGTCATGAAGCGGGAAAAGAACCGCATCACCAAGCTGCGCATCCGCCC
CGCCGGGGAAGACGGCGCAAAACCGGTCTGA

Upstream 100 bases:

>100_bases
AGCTCACCTTCATCCTGACGCGCGGCATCGGTCAGTCCTTCGTCGCCGACGACGTTCCTGCCTCCGAGGTGATCAGCTTT
CTCAGGGAAAAACACCCCTA

Downstream 100 bases:

>100_bases
CCCGGCTTGGACTATCGGCGATCAGTCTCCATATAGGCTTTGTTACCAGCGGGTCGGCTCATCCGGTGCTGCCGGTTCGA
CGGCCAGCGCATGCAGGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSVEGALAFLATYWPEILSITALVLMSAFFSGSETALTAVSRSRIHTLEVNGDERAGLVRQLIERRDRLIGALLIGNNLA
NILSSSIATSLFLGLFGSSGVALATLAMTVILVIFAEVLPKSWAISTPDRFALAIAVPARLFVLVVGPISSFVNAIVRRI
LALFGINLSREVSMLTAHEELRGAVDLLHREGSVVKADRDRLGGVLDLGELELSDIMVHRTAMRAINADDPPEAVVRAIL
ESPYTRMPLWRGTIDNIIGVVHAKDLLRALAEPNMEPQNLDIVKIAQKPWFVPDSTNLEDQLNAFLRRKQHFAVVVDEYG
EVQGIVTLEDILEEIVGDISDEHDIEIQGVRQEADGSVVVDGGVPIRDLNRALDWNLPDEEATTIAGLVIHESMTIPEER
QAFTFYGKRFIVMKREKNRITKLRIRPAGEDGAKPV

Sequences:

>Translated_436_residues
MSVEGALAFLATYWPEILSITALVLMSAFFSGSETALTAVSRSRIHTLEVNGDERAGLVRQLIERRDRLIGALLIGNNLA
NILSSSIATSLFLGLFGSSGVALATLAMTVILVIFAEVLPKSWAISTPDRFALAIAVPARLFVLVVGPISSFVNAIVRRI
LALFGINLSREVSMLTAHEELRGAVDLLHREGSVVKADRDRLGGVLDLGELELSDIMVHRTAMRAINADDPPEAVVRAIL
ESPYTRMPLWRGTIDNIIGVVHAKDLLRALAEPNMEPQNLDIVKIAQKPWFVPDSTNLEDQLNAFLRRKQHFAVVVDEYG
EVQGIVTLEDILEEIVGDISDEHDIEIQGVRQEADGSVVVDGGVPIRDLNRALDWNLPDEEATTIAGLVIHESMTIPEER
QAFTFYGKRFIVMKREKNRITKLRIRPAGEDGAKPV
>Mature_435_residues
SVEGALAFLATYWPEILSITALVLMSAFFSGSETALTAVSRSRIHTLEVNGDERAGLVRQLIERRDRLIGALLIGNNLAN
ILSSSIATSLFLGLFGSSGVALATLAMTVILVIFAEVLPKSWAISTPDRFALAIAVPARLFVLVVGPISSFVNAIVRRIL
ALFGINLSREVSMLTAHEELRGAVDLLHREGSVVKADRDRLGGVLDLGELELSDIMVHRTAMRAINADDPPEAVVRAILE
SPYTRMPLWRGTIDNIIGVVHAKDLLRALAEPNMEPQNLDIVKIAQKPWFVPDSTNLEDQLNAFLRRKQHFAVVVDEYGE
VQGIVTLEDILEEIVGDISDEHDIEIQGVRQEADGSVVVDGGVPIRDLNRALDWNLPDEEATTIAGLVIHESMTIPEERQ
AFTFYGKRFIVMKREKNRITKLRIRPAGEDGAKPV

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=407, Percent_Identity=25.5528255528256, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI40068055, Length=356, Percent_Identity=27.8089887640449, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI40068053, Length=356, Percent_Identity=27.8089887640449, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI94681046, Length=334, Percent_Identity=28.4431137724551, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI40068051, Length=313, Percent_Identity=25.5591054313099, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI145693175, Length=371, Percent_Identity=35.5795148247978, Blast_Score=239, Evalue=2e-64,
Organism=Escherichia coli, GI1790664, Length=425, Percent_Identity=27.2941176470588, Blast_Score=129, Evalue=3e-31,
Organism=Escherichia coli, GI1786879, Length=238, Percent_Identity=30.672268907563, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI87082033, Length=244, Percent_Identity=31.1475409836066, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788119, Length=246, Percent_Identity=30.0813008130081, Blast_Score=92, Evalue=1e-19,
Organism=Saccharomyces cerevisiae, GI6324512, Length=357, Percent_Identity=25.7703081232493, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 47929; Mature: 47798

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00485 A_DEAMINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVEGALAFLATYWPEILSITALVLMSAFFSGSETALTAVSRSRIHTLEVNGDERAGLVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCHHHHHHH
QLIERRDRLIGALLIGNNLANILSSSIATSLFLGLFGSSGVALATLAMTVILVIFAEVLP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
KSWAISTPDRFALAIAVPARLFVLVVGPISSFVNAIVRRILALFGINLSREVSMLTAHEE
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRGAVDLLHREGSVVKADRDRLGGVLDLGELELSDIMVHRTAMRAINADDPPEAVVRAIL
HHHHHHHHHCCCCEEECCHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ESPYTRMPLWRGTIDNIIGVVHAKDLLRALAEPNMEPQNLDIVKIAQKPWFVPDSTNLED
HCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHH
QLNAFLRRKQHFAVVVDEYGEVQGIVTLEDILEEIVGDISDEHDIEIQGVRQEADGSVVV
HHHHHHHHHHCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEE
DGGVPIRDLNRALDWNLPDEEATTIAGLVIHESMTIPEERQAFTFYGKRFIVMKREKNRI
ECCCCHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCHHHHHEEECCEEEEEEECCCCE
TKLRIRPAGEDGAKPV
EEEEEEECCCCCCCCC
>Mature Secondary Structure 
SVEGALAFLATYWPEILSITALVLMSAFFSGSETALTAVSRSRIHTLEVNGDERAGLVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEECCCHHHHHHH
QLIERRDRLIGALLIGNNLANILSSSIATSLFLGLFGSSGVALATLAMTVILVIFAEVLP
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
KSWAISTPDRFALAIAVPARLFVLVVGPISSFVNAIVRRILALFGINLSREVSMLTAHEE
CCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LRGAVDLLHREGSVVKADRDRLGGVLDLGELELSDIMVHRTAMRAINADDPPEAVVRAIL
HHHHHHHHHCCCCEEECCHHHCCCEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ESPYTRMPLWRGTIDNIIGVVHAKDLLRALAEPNMEPQNLDIVKIAQKPWFVPDSTNLED
HCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHH
QLNAFLRRKQHFAVVVDEYGEVQGIVTLEDILEEIVGDISDEHDIEIQGVRQEADGSVVV
HHHHHHHHHHCEEEEEECCCCEEEEEEHHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEE
DGGVPIRDLNRALDWNLPDEEATTIAGLVIHESMTIPEERQAFTFYGKRFIVMKREKNRI
ECCCCHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCHHHHHEEECCEEEEEEECCCCE
TKLRIRPAGEDGAKPV
EEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]