| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yddG [H]
Identifier: 209551160
GI number: 209551160
Start: 3710440
End: 3711327
Strand: Reverse
Name: yddG [H]
Synonym: Rleg2_3584
Alternate gene names: 209551160
Gene position: 3711327-3710440 (Counterclockwise)
Preceding gene: 209551161
Following gene: 209551157
Centisome position: 81.78
GC content: 66.44
Gene sequence:
>888_bases GTGAAACTTCGCGCGACATTGATCGGTTTTACCGCCATCCTGATGTGGTCGTTCCTGGCGCTGTTCACCGCCGCCTCCGG CAAGATGCCGCCGTTCCAGCTTTCGGCCGTCTGCTTTGCGATCGGCAGCCTGCCCGGCCTCGCCGTGCTCGTCGTCAACC CTTCGCGGCTGGCCCTGCTGAAGCAGCCGGCCAAGGTCTGGATCACCGGCATCTCAGGGTTGTTCGGCTATCATTTCCTC TATTTCACCGCGCTCCGGAACGCGCCGGCCGTCGAGGCAGGGCTGATCGCCTATCTCTGGCCGCTGCTGATCGTCGTCGG CTCGGCGCTGCTGCCAGGCGAGCGGCTGCGTTGGTATCATCTGGCCGGCGCCCTTGCCGGGCTTTGCGGCACCTTCCTGA TCGTCGGCCGCAACGGCATCGATTTTGACGGCGCCTATGCCGTCGGCTACGGCGCCGCTTTCCTCTGCGCCTTCACCTGG TCCGGTTACTCGCTGCTGACCCGGCGCTTCGACGCCGTCTCCACCGATGTCGTCACCGGCTTCTGCCTTGCGACGTCGAT CCTGTCACTCGTCTGCCATCTCGGCCTGGAGACGACCGTCTGGCCGGCAACGGCTTTCGAATGGCTCGCCGTCGCCGGGC TCGGGCTTCTGCCCGTCGGTGCGGCCTTCTACGCCTGGGACCACGGCGTCAAGAACGGCGATATCCAGATCCTCGGCGCG GCCAGTTATGCCGCACCGCTGCTTTCGACGCTGATCCTGACGCTGTTCGGCTTTGCCGAGCCGAGCTGGCGCATCGCGGC TGCCTGCCTGCTCGTCACCGGCGGGGCGGTGCTCGCTGCCCGCGATATGTTCCGCCGCAAGATCCAGCCGGCCGTTGCGG CGGAATGA
Upstream 100 bases:
>100_bases GTCTATGTGCGCATTCCCACCGAATATGGGATGGTGACGATCACTGCCGTCAAATACGGCAGCAGCTGACGGAGTTCATG CCTCCGTCAAAGGGGGACGG
Downstream 100 bases:
>100_bases TTTCAGCCGCCGGGCGTCCAGCCTGCCTGCGCCATCTCGAAGCTCGAAAATTCGAAGCCGGGTGAAACGGTACATCCGAC AAGGGTGAACTCACCGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKLRATLIGFTAILMWSFLALFTAASGKMPPFQLSAVCFAIGSLPGLAVLVVNPSRLALLKQPAKVWITGISGLFGYHFL YFTALRNAPAVEAGLIAYLWPLLIVVGSALLPGERLRWYHLAGALAGLCGTFLIVGRNGIDFDGAYAVGYGAAFLCAFTW SGYSLLTRRFDAVSTDVVTGFCLATSILSLVCHLGLETTVWPATAFEWLAVAGLGLLPVGAAFYAWDHGVKNGDIQILGA ASYAAPLLSTLILTLFGFAEPSWRIAAACLLVTGGAVLAARDMFRRKIQPAVAAE
Sequences:
>Translated_295_residues MKLRATLIGFTAILMWSFLALFTAASGKMPPFQLSAVCFAIGSLPGLAVLVVNPSRLALLKQPAKVWITGISGLFGYHFL YFTALRNAPAVEAGLIAYLWPLLIVVGSALLPGERLRWYHLAGALAGLCGTFLIVGRNGIDFDGAYAVGYGAAFLCAFTW SGYSLLTRRFDAVSTDVVTGFCLATSILSLVCHLGLETTVWPATAFEWLAVAGLGLLPVGAAFYAWDHGVKNGDIQILGA ASYAAPLLSTLILTLFGFAEPSWRIAAACLLVTGGAVLAARDMFRRKIQPAVAAE >Mature_295_residues MKLRATLIGFTAILMWSFLALFTAASGKMPPFQLSAVCFAIGSLPGLAVLVVNPSRLALLKQPAKVWITGISGLFGYHFL YFTALRNAPAVEAGLIAYLWPLLIVVGSALLPGERLRWYHLAGALAGLCGTFLIVGRNGIDFDGAYAVGYGAAFLCAFTW SGYSLLTRRFDAVSTDVVTGFCLATSILSLVCHLGLETTVWPATAFEWLAVAGLGLLPVGAAFYAWDHGVKNGDIQILGA ASYAAPLLSTLILTLFGFAEPSWRIAAACLLVTGGAVLAARDMFRRKIQPAVAAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DUF6 domain [H]
Homologues:
Organism=Escherichia coli, GI145693132, Length=292, Percent_Identity=28.0821917808219, Blast_Score=74, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31281; Mature: 31281
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRATLIGFTAILMWSFLALFTAASGKMPPFQLSAVCFAIGSLPGLAVLVVNPSRLALL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHH KQPAKVWITGISGLFGYHFLYFTALRNAPAVEAGLIAYLWPLLIVVGSALLPGERLRWYH HCCHHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LAGALAGLCGTFLIVGRNGIDFDGAYAVGYGAAFLCAFTWSGYSLLTRRFDAVSTDVVTG HHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FCLATSILSLVCHLGLETTVWPATAFEWLAVAGLGLLPVGAAFYAWDHGVKNGDIQILGA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEC ASYAAPLLSTLILTLFGFAEPSWRIAAACLLVTGGAVLAARDMFRRKIQPAVAAE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MKLRATLIGFTAILMWSFLALFTAASGKMPPFQLSAVCFAIGSLPGLAVLVVNPSRLALL CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHH KQPAKVWITGISGLFGYHFLYFTALRNAPAVEAGLIAYLWPLLIVVGSALLPGERLRWYH HCCHHHEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH LAGALAGLCGTFLIVGRNGIDFDGAYAVGYGAAFLCAFTWSGYSLLTRRFDAVSTDVVTG HHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FCLATSILSLVCHLGLETTVWPATAFEWLAVAGLGLLPVGAAFYAWDHGVKNGDIQILGA HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEC ASYAAPLLSTLILTLFGFAEPSWRIAAACLLVTGGAVLAARDMFRRKIQPAVAAE HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1834669; 7567469 [H]