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The map label for this gene is 209551136

Identifier: 209551136

GI number: 209551136

Start: 3688058

End: 3688855

Strand: Direct

Name: 209551136

Synonym: Rleg2_3560

Alternate gene names: NA

Gene position: 3688058-3688855 (Clockwise)

Preceding gene: 209551135

Following gene: 209551137

Centisome position: 81.27

GC content: 62.91

Gene sequence:

>798_bases
ATGTTCATACCTTTTCATGACGCCAACACGCTGAAATATATCAAGGTGCAGTGGGTGACGCTCTCACTGATCGCGCTGAA
TATTGCGGTCTGGCTCTTTACCAGCCTGGAGAGCGAGCAAGCAGCCCAGGCAACGACCGTCGGGCTCGGCTATATTCCGG
CGATCGCCTTTGGCGACGCGGTGCTGGCGCAGGGGCTGGAAATCGTGCCGGAGCCGCTGACCTACCTCACCTATGCCTTC
GTCCATTCCGGCTTCTGGCATCTGGCCTCCAACATGATCTTCCTCTGGGTCTTCGGCGACAATGTCGAGGATGCCATGGG
ACATCTGCGCTTCCTGATTTTCTATCTCCTTTGCGCGGCTGCCGGCGCGCTCTGCCACGGCCTGCTGACCATGACATCGC
AAGCGCCGCTGGTCGGCGCCTCGGGGGCGATTTCCGGTGTGATTGCCGCCTATGTCTTGCTGCATCCGCGCGTCAAGGTC
TGGGTTCTGGTCTTCTTCCGCGTGCCGCTGCCGCTGCCGGCCTTCGTGCCGCTGCTTTTGTGGATCGGCCAACAATTCTT
CATGCTGGCGGTCGCACCCGACGGCGACGTTTCCTGGGGCGCACATGTCGGCGGCATCCTTGCCGGAGCGCTTCTGATCC
TGGTGTTGCGCCGGCCGGGTGTGCCGCTCTTCGACCGGGAAATCGTCACACCCCGGGCTGTGCGAAGCGATCCCGGCGCC
GGTCCGGCCATCGCCGTCGACGCAGCCGGGCGCAAGGTTCAACGCCTTCCCTGGGGGCGGCGCCGACAAGAATATTGA

Upstream 100 bases:

>100_bases
TCGCCGCGCGTCATGCAAATGACCGAGGTCATGCGGATGTGCTTTGGGTTCCGGGAAAAAACAGATAGGCTTGCCGCGAT
CACGATTGCCGGGGGGCTTG

Downstream 100 bases:

>100_bases
CGTGAACGTAAACGTCCATATATTGCCCGGCAAATCGCCCCCCGCTGGCATGGAAGCGTTGTAATTGGAGGAAAAGCGCG
TATCCATGTCGCCATTCGAC

Product: rhomboid family protein

Products: NA

Alternate protein names: Peptidase; S54 Family Peptidase; Rhomboid-Like Protein; Integral Membrane Protein; Peptidase Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Transmembrane Rhomboid Family Protein; Rhomboid Serine Protease

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFIPFHDANTLKYIKVQWVTLSLIALNIAVWLFTSLESEQAAQATTVGLGYIPAIAFGDAVLAQGLEIVPEPLTYLTYAF
VHSGFWHLASNMIFLWVFGDNVEDAMGHLRFLIFYLLCAAAGALCHGLLTMTSQAPLVGASGAISGVIAAYVLLHPRVKV
WVLVFFRVPLPLPAFVPLLLWIGQQFFMLAVAPDGDVSWGAHVGGILAGALLILVLRRPGVPLFDREIVTPRAVRSDPGA
GPAIAVDAAGRKVQRLPWGRRRQEY

Sequences:

>Translated_265_residues
MFIPFHDANTLKYIKVQWVTLSLIALNIAVWLFTSLESEQAAQATTVGLGYIPAIAFGDAVLAQGLEIVPEPLTYLTYAF
VHSGFWHLASNMIFLWVFGDNVEDAMGHLRFLIFYLLCAAAGALCHGLLTMTSQAPLVGASGAISGVIAAYVLLHPRVKV
WVLVFFRVPLPLPAFVPLLLWIGQQFFMLAVAPDGDVSWGAHVGGILAGALLILVLRRPGVPLFDREIVTPRAVRSDPGA
GPAIAVDAAGRKVQRLPWGRRRQEY
>Mature_265_residues
MFIPFHDANTLKYIKVQWVTLSLIALNIAVWLFTSLESEQAAQATTVGLGYIPAIAFGDAVLAQGLEIVPEPLTYLTYAF
VHSGFWHLASNMIFLWVFGDNVEDAMGHLRFLIFYLLCAAAGALCHGLLTMTSQAPLVGASGAISGVIAAYVLLHPRVKV
WVLVFFRVPLPLPAFVPLLLWIGQQFFMLAVAPDGDVSWGAHVGGILAGALLILVLRRPGVPLFDREIVTPRAVRSDPGA
GPAIAVDAAGRKVQRLPWGRRRQEY

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=149, Percent_Identity=32.2147651006711, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28855; Mature: 28855

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIPFHDANTLKYIKVQWVTLSLIALNIAVWLFTSLESEQAAQATTVGLGYIPAIAFGDA
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHH
VLAQGLEIVPEPLTYLTYAFVHSGFWHLASNMIFLWVFGDNVEDAMGHLRFLIFYLLCAA
HHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
AGALCHGLLTMTSQAPLVGASGAISGVIAAYVLLHPRVKVWVLVFFRVPLPLPAFVPLLL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHH
WIGQQFFMLAVAPDGDVSWGAHVGGILAGALLILVLRRPGVPLFDREIVTPRAVRSDPGA
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCC
GPAIAVDAAGRKVQRLPWGRRRQEY
CCEEEEECCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MFIPFHDANTLKYIKVQWVTLSLIALNIAVWLFTSLESEQAAQATTVGLGYIPAIAFGDA
CCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHH
VLAQGLEIVPEPLTYLTYAFVHSGFWHLASNMIFLWVFGDNVEDAMGHLRFLIFYLLCAA
HHHCCCHHCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH
AGALCHGLLTMTSQAPLVGASGAISGVIAAYVLLHPRVKVWVLVFFRVPLPLPAFVPLLL
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHH
WIGQQFFMLAVAPDGDVSWGAHVGGILAGALLILVLRRPGVPLFDREIVTPRAVRSDPGA
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCC
GPAIAVDAAGRKVQRLPWGRRRQEY
CCEEEEECCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA