| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is secA [H]
Identifier: 209551116
GI number: 209551116
Start: 3667399
End: 3670116
Strand: Direct
Name: secA [H]
Synonym: Rleg2_3540
Alternate gene names: 209551116
Gene position: 3667399-3670116 (Clockwise)
Preceding gene: 209551109
Following gene: 209551117
Centisome position: 80.82
GC content: 61.18
Gene sequence:
>2718_bases ATGGTCAGCTTTGGCGGTATAGCCCGCAAGTTATTTGGGTCCTCCAATGACCGCCGCGTGCGGTCTTTCCAGCCGAACGT CGCAGCCATCAACTCTATCGAAGAGAAGACCAAGGCCCTGACGGACGAGCAGCTCGCGGCAAAGACCGTGGAGTTTCGTG CCCTGCTCGCCGAAGGCAAGACGCTCGACGACATTCTGATTCCGGCCTTTGCCGTCGTGCGCGAAGCCTCGCGCCGCGTT CTTGGCCTGCGGCCTTTTGACGTACAGCTGGTCGGCGGCATGATCCTGCATTCGAATGCGATCGCCGAGATGAAGACCGG CGAAGGCAAGACCCTCGTCGCCACCCTGCCGGTCTATCTGAACGCGCTGTCCGGCAAGGGCGTGCACGTCGTCACCGTCA ACGATTACCTCGCCCAGCGCGATGCCGCGACCATGGGCCGCGTCTACAGCTTTCTCGGCATGACCACCGGCGTCATCGTC CACGGCCTGTCCGACGAGGAACGCCACGCGGCCTATGCCTGCGACATCACCTACGCCACCAACAACGAACTCGGCTTCGA TTATCTGCGCGATAACATGAAGTACGAGAAGAACCAGATGGTCCAACGCGGCCACAACTTCGCGATCGTCGACGAAGTGG ACTCGATCCTCGTCGACGAGGCGCGCACGCCGCTGATCATCTCCGGTCCGCTCGACGACCGCTCGGAACTCTACAATACG ATCGACGCCTTCATTCCGTTGCTCGTCCCCAGCGATTACGAGATCGACGAGAAGCAGCGCTCGGCCAACTTCTCCGAAGA GGGCACCGAGAAGCTGGAAAACCTGCTCCGCCAGGCCGGCCTCTTGAAGGGCAACGCGCTCTACGACATCGAGAACGTCG CCATTGTCCACCACGTCAACAACGCACTGAAGGCTCACAAGCTCTTCCAGCGCGACAAGGACTATATCGTCCGCAACGAC GAAGTGGTCATCATCGACGAGTTCACCGGCCGCATGATGCCGGGTCGCCGTTATTCGGAAGGTCAGCACCAGGCGCTCGA AGCCAAGGAAAGGGTGCAGATCCAGCCGGAAAACCAGACGCTGGCCTCGATCACCTTCCAGAATTATTTCCGCATGTACG CCAAGCTCGCCGGCATGACCGGCACGGCGCAGACCGAAGCGGAAGAATTCGCCAACATCTACAATCTCGATGTCATCGAG GTCCCGACCAACCTGCCGATCAAGCGTATCGACGAGGACGACGAGGTTTACCGGACCTTCGACGAGAAGTTCAAGGCGAT CATCGAGGAAATCCTCGACGCCCATAAGCGCGGCCAGCCGGTGCTGGTCGGCACCACCTCGATCGAAAAATCGGAACTGC TCGCCGAGCGCCTGCGCAAGCAGGGCTTCGACGACTTCCAGGTGCTGAACGCCCGCTACCACGAGCAGGAAGCCTATATC GTCGCACAGGCCGGTGTGCCCGGCGCCATCACGATCGCGACCAATATGGCCGGCCGCGGTACCGACATCCAGCTCGGCGG CAACCTCGACATGCGCATTGAGCGCGAACTCGGTGAAGTCGAAGCCGGTCCGGAGCGGGAAGCCCGGATCCAGGCGATCG TCGAGGAGATCAAGGAACTCAAGCAGAAGGCGCTTGCCGCCGGCGGTCTCTACGTCATCGCCACCGAACGCCATGAAAGC CGCCGCATCGACAACCAGCTGCGCGGTCGCTCCGGCCGTCAGGGCGACCCCGGCCGCTCGAAATTCTACCTCTCGCTTCA GGACGACCTGATGCGCATCTTCGGCTCCGACCGCATGGACAGCATGCTGACCAAGCTCGGTCTCAAGGAGGGCGAGGCGA TCGTCCACCCTTGGATCAACAAGGCTCTGGAGCGCGCCCAGAAGAAGGTCGAAGCCCGCAACTTCGATATCCGCAAGAAC CTCTTGAAGTATGACGACGTTCTCAACGATCAGCGCAAGGTGATCTTCGAGCAGCGCCTCGAACTGATGGAATCGACCAA TATTTCCGAGACCGTTTCCGACATGCGCCGTGAGGTGATCGAGGATCTGGTCGACAAGCATATACCCGAGCGCGCCTACG CCGAGCAATGGGATGCGGCCGGCCTGAAGACCGGTGCTCTGAACATTCTCAATCTCGACCTGCCGATCGAAGACTGGGTG AAGGAAGAGGGCATCGGCGAAGACGATATCCGCGAGCGCCTGACGCAAGCCACCAACGCTGCCTTCACCGAAAAGGCCGA GCGTTTCGGCGACGACATCATGCATTATGTCGAACGCTCGATCGTCATGCAGACGCTCGATCATCTCTGGCGCGAGCACA TCGTCAATCTCGACCATCTGCGCTCCGTCATCGGCTTCCGCGGCTATGCCCAGCGCGATCCGCTGCAGGAATACAAGTCG GAAGCCTTCGAGCTGTTCACGAGCCTCCTCAACAATCTACGCGAGGCCGTGACCGCCCAGCTGATGCGCGTCGAGCTGGT GCAGCAGGCCCCCGCCGAACCCGAACCGCCGCTGATGCAGGCCCATCACCTCGATCCGACCACCGGCGAGGACGATTTCG CCCCGGCGATCTACCAGGCATCGGAAGTCATCGTTTCGCCGGAGAACCGCAATCCGGACGACCCGGCTACCTGGGGCAAG GTCGGCCGCAACGAGACCTGCCCCTGCGGTTCCGGCAAGAAATACAAGCATTGCCACGGCGCCTTCGAGCAGGTCTGA
Upstream 100 bases:
>100_bases GTCCAGAACAGTTTCCGGGCGTTTTAAGGCGCGCGCCTGATTTTCGGCTGGGCCGCGAACAACAAACGTCGGGGATGAAT ATTGAGAAAGGACCAGTCAT
Downstream 100 bases:
>100_bases GGCAAGCCGCAAAGATCCTAAAAATGCCGCCTTCGGGCGGCATTTTCTTTTCCGCGGCGGCACCCGAAAACCGCAATTTC AGCGTCGGTCGACAGGCCCG
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 905; Mature: 905
Protein sequence:
>905_residues MVSFGGIARKLFGSSNDRRVRSFQPNVAAINSIEEKTKALTDEQLAAKTVEFRALLAEGKTLDDILIPAFAVVREASRRV LGLRPFDVQLVGGMILHSNAIAEMKTGEGKTLVATLPVYLNALSGKGVHVVTVNDYLAQRDAATMGRVYSFLGMTTGVIV HGLSDEERHAAYACDITYATNNELGFDYLRDNMKYEKNQMVQRGHNFAIVDEVDSILVDEARTPLIISGPLDDRSELYNT IDAFIPLLVPSDYEIDEKQRSANFSEEGTEKLENLLRQAGLLKGNALYDIENVAIVHHVNNALKAHKLFQRDKDYIVRND EVVIIDEFTGRMMPGRRYSEGQHQALEAKERVQIQPENQTLASITFQNYFRMYAKLAGMTGTAQTEAEEFANIYNLDVIE VPTNLPIKRIDEDDEVYRTFDEKFKAIIEEILDAHKRGQPVLVGTTSIEKSELLAERLRKQGFDDFQVLNARYHEQEAYI VAQAGVPGAITIATNMAGRGTDIQLGGNLDMRIERELGEVEAGPEREARIQAIVEEIKELKQKALAAGGLYVIATERHES RRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSDRMDSMLTKLGLKEGEAIVHPWINKALERAQKKVEARNFDIRKN LLKYDDVLNDQRKVIFEQRLELMESTNISETVSDMRREVIEDLVDKHIPERAYAEQWDAAGLKTGALNILNLDLPIEDWV KEEGIGEDDIRERLTQATNAAFTEKAERFGDDIMHYVERSIVMQTLDHLWREHIVNLDHLRSVIGFRGYAQRDPLQEYKS EAFELFTSLLNNLREAVTAQLMRVELVQQAPAEPEPPLMQAHHLDPTTGEDDFAPAIYQASEVIVSPENRNPDDPATWGK VGRNETCPCGSGKKYKHCHGAFEQV
Sequences:
>Translated_905_residues MVSFGGIARKLFGSSNDRRVRSFQPNVAAINSIEEKTKALTDEQLAAKTVEFRALLAEGKTLDDILIPAFAVVREASRRV LGLRPFDVQLVGGMILHSNAIAEMKTGEGKTLVATLPVYLNALSGKGVHVVTVNDYLAQRDAATMGRVYSFLGMTTGVIV HGLSDEERHAAYACDITYATNNELGFDYLRDNMKYEKNQMVQRGHNFAIVDEVDSILVDEARTPLIISGPLDDRSELYNT IDAFIPLLVPSDYEIDEKQRSANFSEEGTEKLENLLRQAGLLKGNALYDIENVAIVHHVNNALKAHKLFQRDKDYIVRND EVVIIDEFTGRMMPGRRYSEGQHQALEAKERVQIQPENQTLASITFQNYFRMYAKLAGMTGTAQTEAEEFANIYNLDVIE VPTNLPIKRIDEDDEVYRTFDEKFKAIIEEILDAHKRGQPVLVGTTSIEKSELLAERLRKQGFDDFQVLNARYHEQEAYI VAQAGVPGAITIATNMAGRGTDIQLGGNLDMRIERELGEVEAGPEREARIQAIVEEIKELKQKALAAGGLYVIATERHES RRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSDRMDSMLTKLGLKEGEAIVHPWINKALERAQKKVEARNFDIRKN LLKYDDVLNDQRKVIFEQRLELMESTNISETVSDMRREVIEDLVDKHIPERAYAEQWDAAGLKTGALNILNLDLPIEDWV KEEGIGEDDIRERLTQATNAAFTEKAERFGDDIMHYVERSIVMQTLDHLWREHIVNLDHLRSVIGFRGYAQRDPLQEYKS EAFELFTSLLNNLREAVTAQLMRVELVQQAPAEPEPPLMQAHHLDPTTGEDDFAPAIYQASEVIVSPENRNPDDPATWGK VGRNETCPCGSGKKYKHCHGAFEQV >Mature_905_residues MVSFGGIARKLFGSSNDRRVRSFQPNVAAINSIEEKTKALTDEQLAAKTVEFRALLAEGKTLDDILIPAFAVVREASRRV LGLRPFDVQLVGGMILHSNAIAEMKTGEGKTLVATLPVYLNALSGKGVHVVTVNDYLAQRDAATMGRVYSFLGMTTGVIV HGLSDEERHAAYACDITYATNNELGFDYLRDNMKYEKNQMVQRGHNFAIVDEVDSILVDEARTPLIISGPLDDRSELYNT IDAFIPLLVPSDYEIDEKQRSANFSEEGTEKLENLLRQAGLLKGNALYDIENVAIVHHVNNALKAHKLFQRDKDYIVRND EVVIIDEFTGRMMPGRRYSEGQHQALEAKERVQIQPENQTLASITFQNYFRMYAKLAGMTGTAQTEAEEFANIYNLDVIE VPTNLPIKRIDEDDEVYRTFDEKFKAIIEEILDAHKRGQPVLVGTTSIEKSELLAERLRKQGFDDFQVLNARYHEQEAYI VAQAGVPGAITIATNMAGRGTDIQLGGNLDMRIERELGEVEAGPEREARIQAIVEEIKELKQKALAAGGLYVIATERHES RRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSDRMDSMLTKLGLKEGEAIVHPWINKALERAQKKVEARNFDIRKN LLKYDDVLNDQRKVIFEQRLELMESTNISETVSDMRREVIEDLVDKHIPERAYAEQWDAAGLKTGALNILNLDLPIEDWV KEEGIGEDDIRERLTQATNAAFTEKAERFGDDIMHYVERSIVMQTLDHLWREHIVNLDHLRSVIGFRGYAQRDPLQEYKS EAFELFTSLLNNLREAVTAQLMRVELVQQAPAEPEPPLMQAHHLDPTTGEDDFAPAIYQASEVIVSPENRNPDDPATWGK VGRNETCPCGSGKKYKHCHGAFEQV
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=919, Percent_Identity=52.2306855277476, Blast_Score=922, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 102190; Mature: 102190
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSFGGIARKLFGSSNDRRVRSFQPNVAAINSIEEKTKALTDEQLAAKTVEFRALLAEGK CCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TLDDILIPAFAVVREASRRVLGLRPFDVQLVGGMILHSNAIAEMKTGEGKTLVATLPVYL CHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCEECCCHHHEECCCCCEEEEEHHHHH NALSGKGVHVVTVNDYLAQRDAATMGRVYSFLGMTTGVIVHGLSDEERHAAYACDITYAT HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEEEC NNELGFDYLRDNMKYEKNQMVQRGHNFAIVDEVDSILVDEARTPLIISGPLDDRSELYNT CCCCCHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH IDAFIPLLVPSDYEIDEKQRSANFSEEGTEKLENLLRQAGLLKGNALYDIENVAIVHHVN HHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHCCCEEHHHH NALKAHKLFQRDKDYIVRNDEVVIIDEFTGRMMPGRRYSEGQHQALEAKERVQIQPENQT HHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCEEECCCCCH LASITFQNYFRMYAKLAGMTGTAQTEAEEFANIYNLDVIEVPTNLPIKRIDEDDEVYRTF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHCCCHHHHHHHH DEKFKAIIEEILDAHKRGQPVLVGTTSIEKSELLAERLRKQGFDDFQVLNARYHEQEAYI HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEE VAQAGVPGAITIATNMAGRGTDIQLGGNLDMRIERELGEVEAGPEREARIQAIVEEIKEL EEECCCCEEEEEEECCCCCCCEEEECCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHH KQKALAAGGLYVIATERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSDRMD HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHH SMLTKLGLKEGEAIVHPWINKALERAQKKVEARNFDIRKNLLKYDDVLNDQRKVIFEQRL HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHH ELMESTNISETVSDMRREVIEDLVDKHIPERAYAEQWDAAGLKTGALNILNLDLPIEDWV HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHH KEEGIGEDDIRERLTQATNAAFTEKAERFGDDIMHYVERSIVMQTLDHLWREHIVNLDHL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RSVIGFRGYAQRDPLQEYKSEAFELFTSLLNNLREAVTAQLMRVELVQQAPAEPEPPLMQ HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AHHLDPTTGEDDFAPAIYQASEVIVSPENRNPDDPATWGKVGRNETCPCGSGKKYKHCHG CCCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHH AFEQV HHHCC >Mature Secondary Structure MVSFGGIARKLFGSSNDRRVRSFQPNVAAINSIEEKTKALTDEQLAAKTVEFRALLAEGK CCCCHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TLDDILIPAFAVVREASRRVLGLRPFDVQLVGGMILHSNAIAEMKTGEGKTLVATLPVYL CHHHHHHHHHHHHHHHHHHEECCCCCCHHHHCCCCEECCCHHHEECCCCCEEEEEHHHHH NALSGKGVHVVTVNDYLAQRDAATMGRVYSFLGMTTGVIVHGLSDEERHAAYACDITYAT HHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEEEC NNELGFDYLRDNMKYEKNQMVQRGHNFAIVDEVDSILVDEARTPLIISGPLDDRSELYNT CCCCCHHHHHHCCHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH IDAFIPLLVPSDYEIDEKQRSANFSEEGTEKLENLLRQAGLLKGNALYDIENVAIVHHVN HHHHHHHHCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHCCCEEHHHH NALKAHKLFQRDKDYIVRNDEVVIIDEFTGRMMPGRRYSEGQHQALEAKERVQIQPENQT HHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCEEECCCCCH LASITFQNYFRMYAKLAGMTGTAQTEAEEFANIYNLDVIEVPTNLPIKRIDEDDEVYRTF HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEEECCCCCCHHHCCCHHHHHHHH DEKFKAIIEEILDAHKRGQPVLVGTTSIEKSELLAERLRKQGFDDFQVLNARYHEQEAYI HHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEE VAQAGVPGAITIATNMAGRGTDIQLGGNLDMRIERELGEVEAGPEREARIQAIVEEIKEL EEECCCCEEEEEEECCCCCCCEEEECCCCCEEEHHHHCCCCCCCCHHHHHHHHHHHHHHH KQKALAAGGLYVIATERHESRRIDNQLRGRSGRQGDPGRSKFYLSLQDDLMRIFGSDRMD HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCHHH SMLTKLGLKEGEAIVHPWINKALERAQKKVEARNFDIRKNLLKYDDVLNDQRKVIFEQRL HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHH ELMESTNISETVSDMRREVIEDLVDKHIPERAYAEQWDAAGLKTGALNILNLDLPIEDWV HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCHHHHH KEEGIGEDDIRERLTQATNAAFTEKAERFGDDIMHYVERSIVMQTLDHLWREHIVNLDHL HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH RSVIGFRGYAQRDPLQEYKSEAFELFTSLLNNLREAVTAQLMRVELVQQAPAEPEPPLMQ HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC AHHLDPTTGEDDFAPAIYQASEVIVSPENRNPDDPATWGKVGRNETCPCGSGKKYKHCHG CCCCCCCCCCCCCCHHHHHCCCEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHH AFEQV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA