| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551092
Identifier: 209551092
GI number: 209551092
Start: 3636401
End: 3637189
Strand: Reverse
Name: 209551092
Synonym: Rleg2_3516
Alternate gene names: NA
Gene position: 3637189-3636401 (Counterclockwise)
Preceding gene: 209551093
Following gene: 209551091
Centisome position: 80.15
GC content: 58.43
Gene sequence:
>789_bases ATGTCATCGACTTTCTCTTTCCCGCAGTTGAAGCGGATCCTCCTCTATGCCTCATTTGCCGCAAGCCTCGCACCGCCGAC GAGTGCGTGGGCGGATGATGCGAAGGCGCTCCTGAAGACAATGTCCGATTTTCTGACGGCGCAGAAGACGATCTCCTTCA CCTACCAATCGTCGCTCGAAGCAGTGACGCCCGCCTTCGAGAAACTCCAGTTCGTCAGTTCGGGGACAGCCAACCTGACG CGCCCCGATAAGCTGCGGGTCACGAGGACCGGCGGCTTTGCCGACCTAGACGTGAGCTTCGACGGTTCGTCGCTGACGGT TCACGGCAAGAACCTCGACGCCTATGCCAAGATCGACGGCAAGGGTTCGCTCGATGATCTGATCGACAGGCTGATGACCG CAGGCGTCGAAGCGCCGGGCGCCGATCTTTTATCCTCAAACGTCTATGACGAACTCATGTCCGATGTGACGGAGGCCAAG CATATTTCCAGTGCGTTCGTGGATGGGGTCGAATGCGAATATCTGGCCTTCCGGACGCCTGAGATCGACTGGCAGATCTG GATACAGAGCGGCCCGCAACCGATACCCCGCCGTTACGTCATCACCAGCAAACACGTCGTCCAGGCGCCGCAATACACGC TCGAAATCAGCGATTTCAAAAGCGGAGCGGAGGTCGCGGCCGTTTCCTACACGATCGAGGTTCCAGCCAGCGCAAAGACG GTCGATCTCAGTGAGCTGCAATCGCTCGATGAGCTGCCTGAGGCCGCCGATATGGGAGAGGTAAAATGA
Upstream 100 bases:
>100_bases GCATTGCATCTCTCACATGTCATGTCCGGCTGCGGAATGTCCGGCAGCTGCTATCCGCAATTCGATGAAATCAATGACGA CACGAACGAAAGGCATTGCC
Downstream 100 bases:
>100_bases CCTATAGGAAGCTGTTCTTCGCCCTCGGCCTGGCCGGCATTCTGACATTCACCGGCTTCCACATCGAGGAGCAGGGATCC ATGCCGCTGTCGATCGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSSTFSFPQLKRILLYASFAASLAPPTSAWADDAKALLKTMSDFLTAQKTISFTYQSSLEAVTPAFEKLQFVSSGTANLT RPDKLRVTRTGGFADLDVSFDGSSLTVHGKNLDAYAKIDGKGSLDDLIDRLMTAGVEAPGADLLSSNVYDELMSDVTEAK HISSAFVDGVECEYLAFRTPEIDWQIWIQSGPQPIPRRYVITSKHVVQAPQYTLEISDFKSGAEVAAVSYTIEVPASAKT VDLSELQSLDELPEAADMGEVK
Sequences:
>Translated_262_residues MSSTFSFPQLKRILLYASFAASLAPPTSAWADDAKALLKTMSDFLTAQKTISFTYQSSLEAVTPAFEKLQFVSSGTANLT RPDKLRVTRTGGFADLDVSFDGSSLTVHGKNLDAYAKIDGKGSLDDLIDRLMTAGVEAPGADLLSSNVYDELMSDVTEAK HISSAFVDGVECEYLAFRTPEIDWQIWIQSGPQPIPRRYVITSKHVVQAPQYTLEISDFKSGAEVAAVSYTIEVPASAKT VDLSELQSLDELPEAADMGEVK >Mature_261_residues SSTFSFPQLKRILLYASFAASLAPPTSAWADDAKALLKTMSDFLTAQKTISFTYQSSLEAVTPAFEKLQFVSSGTANLTR PDKLRVTRTGGFADLDVSFDGSSLTVHGKNLDAYAKIDGKGSLDDLIDRLMTAGVEAPGADLLSSNVYDELMSDVTEAKH ISSAFVDGVECEYLAFRTPEIDWQIWIQSGPQPIPRRYVITSKHVVQAPQYTLEISDFKSGAEVAAVSYTIEVPASAKTV DLSELQSLDELPEAADMGEVK
Specific function: Unknown
COG id: COG3900
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28436; Mature: 28305
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTFSFPQLKRILLYASFAASLAPPTSAWADDAKALLKTMSDFLTAQKTISFTYQSSLE CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH AVTPAFEKLQFVSSGTANLTRPDKLRVTRTGGFADLDVSFDGSSLTVHGKNLDAYAKIDG HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCEEEEECCCCCEEEEECC KGSLDDLIDRLMTAGVEAPGADLLSSNVYDELMSDVTEAKHISSAFVDGVECEYLAFRTP CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC EIDWQIWIQSGPQPIPRRYVITSKHVVQAPQYTLEISDFKSGAEVAAVSYTIEVPASAKT CCCEEEEECCCCCCCCCEEEEECCHHEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCE VDLSELQSLDELPEAADMGEVK ECHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSTFSFPQLKRILLYASFAASLAPPTSAWADDAKALLKTMSDFLTAQKTISFTYQSSLE CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH AVTPAFEKLQFVSSGTANLTRPDKLRVTRTGGFADLDVSFDGSSLTVHGKNLDAYAKIDG HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEEEECCCEEEEECCCCCEEEEECC KGSLDDLIDRLMTAGVEAPGADLLSSNVYDELMSDVTEAKHISSAFVDGVECEYLAFRTP CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC EIDWQIWIQSGPQPIPRRYVITSKHVVQAPQYTLEISDFKSGAEVAAVSYTIEVPASAKT CCCEEEEECCCCCCCCCEEEEECCHHEECCCEEEEECCCCCCCCEEEEEEEEECCCCCCE VDLSELQSLDELPEAADMGEVK ECHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA