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The map label for this gene is ycjP [C]

Identifier: 209551065

GI number: 209551065

Start: 3606379

End: 3607350

Strand: Reverse

Name: ycjP [C]

Synonym: Rleg2_3489

Alternate gene names: 209551065

Gene position: 3607350-3606379 (Counterclockwise)

Preceding gene: 209551066

Following gene: 209551064

Centisome position: 79.49

GC content: 61.01

Gene sequence:

>972_bases
ATGAGCAGCGTGACCGCCTCGACTGTACCTTCGACTTCAGCCCTTTCGCAGAGCAGCGGCAACAGGAATAACAACACACG
CTGGATCGGCCGCCTCGCCATCTACGGGCTGCTGACGATCTTCGCCATCCTCTACCTGATGCCGCTCTTCGTCATGCTCA
CAACCTCGTTCAAGACGATGGACGAGATCCAGGGCGGCAACATGCTGGCGCTGCCGCAGGCGCCGACCTTCGATCCCTGG
GTGAAGGCCTGGGGCGAGACCTGCGTCGGGCTGACCTGCGCCGGCATCAAGGGCTACTTCTGGAACTCGATCAAGATGGT
GGTGCCGGCTGTGGCAATCTCCACCATCATGGGCGCGCTGAACGGTTATGTCCTGACCAAGTGGCGCTTCCCCGGCCATA
CGCTGGTGTTCGGGCTGATGCTGTTTGCCTGCTTCATCCCGTTCCAGTCGGTGCTCTTGCCGATGGCGACGATCCTCGGC
TCGCTCGGCCGCTTCGGCGTCACCCTGCAGAACGCCACCGGCTTTAACTTCGGCTTCGGCAATCCCACGATCAACCTGGT
CTTCGTCCATGTCGTCTACGGCTTGGGCTTCACCACGCTGTTCTTCCGCAATTTCTACGAGGCCTTTCCGACCGAGCTGG
TCCGCGCTGCCCAGGTCGACGGCGCCAGCTTCTTCCAGATCTTCCGCCGCATCATGCTGCCGAACTCGCTGCCGATCATC
GTCGTCACTGTCATCTACCAGTTCACCAACATCTGGAACGACTTCCTGTTTGCCTCGGCCTATGCCGGCACCGGCGACTC
CATGCCGATGACGGTGGCGCTCAACAATGTCGTCAACACCTCGACGGGGGTGGTCGAATACAATGTCAACATGGCTGCGG
CGATGATCGCGGCCGTTCCCACACTGATCGTCTATATCCTCGCCGGCCGCTACTTCGTGCGCGGTCTGATGGCGGGGGCA
GTCAAAGGGTAA

Upstream 100 bases:

>100_bases
ACGAGATGGCCGTCGGCTCGGCCAGCGCCATCATCATGCTGATGACCATCTCGGCGATCATCGTCCCCTATCTCTATTCC
GAACTGAAGGAGAAGGCCCG

Downstream 100 bases:

>100_bases
GTCATGGCCTTCCTCGAAATCTCCGGTCTCAGAAAGCGTTTCGGCGCCGTCGACATTCTCAAGGGGATCGACCTCGAACT
CGAAAAGGGCGGCTTTCTCG

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MSSVTASTVPSTSALSQSSGNRNNNTRWIGRLAIYGLLTIFAILYLMPLFVMLTTSFKTMDEIQGGNMLALPQAPTFDPW
VKAWGETCVGLTCAGIKGYFWNSIKMVVPAVAISTIMGALNGYVLTKWRFPGHTLVFGLMLFACFIPFQSVLLPMATILG
SLGRFGVTLQNATGFNFGFGNPTINLVFVHVVYGLGFTTLFFRNFYEAFPTELVRAAQVDGASFFQIFRRIMLPNSLPII
VVTVIYQFTNIWNDFLFASAYAGTGDSMPMTVALNNVVNTSTGVVEYNVNMAAAMIAAVPTLIVYILAGRYFVRGLMAGA
VKG

Sequences:

>Translated_323_residues
MSSVTASTVPSTSALSQSSGNRNNNTRWIGRLAIYGLLTIFAILYLMPLFVMLTTSFKTMDEIQGGNMLALPQAPTFDPW
VKAWGETCVGLTCAGIKGYFWNSIKMVVPAVAISTIMGALNGYVLTKWRFPGHTLVFGLMLFACFIPFQSVLLPMATILG
SLGRFGVTLQNATGFNFGFGNPTINLVFVHVVYGLGFTTLFFRNFYEAFPTELVRAAQVDGASFFQIFRRIMLPNSLPII
VVTVIYQFTNIWNDFLFASAYAGTGDSMPMTVALNNVVNTSTGVVEYNVNMAAAMIAAVPTLIVYILAGRYFVRGLMAGA
VKG
>Mature_322_residues
SSVTASTVPSTSALSQSSGNRNNNTRWIGRLAIYGLLTIFAILYLMPLFVMLTTSFKTMDEIQGGNMLALPQAPTFDPWV
KAWGETCVGLTCAGIKGYFWNSIKMVVPAVAISTIMGALNGYVLTKWRFPGHTLVFGLMLFACFIPFQSVLLPMATILGS
LGRFGVTLQNATGFNFGFGNPTINLVFVHVVYGLGFTTLFFRNFYEAFPTELVRAAQVDGASFFQIFRRIMLPNSLPIIV
VTVIYQFTNIWNDFLFASAYAGTGDSMPMTVALNNVVNTSTGVVEYNVNMAAAMIAAVPTLIVYILAGRYFVRGLMAGAV
KG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=302, Percent_Identity=28.476821192053, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1790464, Length=291, Percent_Identity=26.8041237113402, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789860, Length=201, Percent_Identity=24.8756218905473, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35184; Mature: 35053

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVTASTVPSTSALSQSSGNRNNNTRWIGRLAIYGLLTIFAILYLMPLFVMLTTSFKTM
CCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIQGGNMLALPQAPTFDPWVKAWGETCVGLTCAGIKGYFWNSIKMVVPAVAISTIMGAL
HHCCCCCEEECCCCCCCCHHHHHHCCHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NGYVLTKWRFPGHTLVFGLMLFACFIPFQSVLLPMATILGSLGRFGVTLQNATGFNFGFG
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
NPTINLVFVHVVYGLGFTTLFFRNFYEAFPTELVRAAQVDGASFFQIFRRIMLPNSLPII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
VVTVIYQFTNIWNDFLFASAYAGTGDSMPMTVALNNVVNTSTGVVEYNVNMAAAMIAAVP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCEEEECCHHHHHHHHHHH
TLIVYILAGRYFVRGLMAGAVKG
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SSVTASTVPSTSALSQSSGNRNNNTRWIGRLAIYGLLTIFAILYLMPLFVMLTTSFKTM
CCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIQGGNMLALPQAPTFDPWVKAWGETCVGLTCAGIKGYFWNSIKMVVPAVAISTIMGAL
HHCCCCCEEECCCCCCCCHHHHHHCCHHHCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
NGYVLTKWRFPGHTLVFGLMLFACFIPFQSVLLPMATILGSLGRFGVTLQNATGFNFGFG
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCC
NPTINLVFVHVVYGLGFTTLFFRNFYEAFPTELVRAAQVDGASFFQIFRRIMLPNSLPII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHH
VVTVIYQFTNIWNDFLFASAYAGTGDSMPMTVALNNVVNTSTGVVEYNVNMAAAMIAAVP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHCCCCCEEEECCHHHHHHHHHHH
TLIVYILAGRYFVRGLMAGAVKG
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]