| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209551059
Identifier: 209551059
GI number: 209551059
Start: 3598537
End: 3599565
Strand: Reverse
Name: 209551059
Synonym: Rleg2_3483
Alternate gene names: NA
Gene position: 3599565-3598537 (Counterclockwise)
Preceding gene: 209551064
Following gene: 209551058
Centisome position: 79.32
GC content: 68.03
Gene sequence:
>1029_bases ATGGCCCATCTCTTCCTCGTCAAGGACATCGCCTTCCAGGCTGGATTGAGCACCGCAACCGTCGACCGCGTGCTGAACGG ACGGCCGGGTGTGCGCCAGCAGACGGAGATGCGGGTGAAGGCGGCGATCGCGGAGCTCGAAAAGCAGCAGGCCGGGGCGG TGGCGAGCGGGCGCATGCTGGCGGTCGACATCGTCATGGAGACACCCCAGCGTTTCAGCGATGCGGTGCGCGCCGCCTTC GAGGCGGAGATGGCGGCCTTCCTGCCCGGCGTCTTCCGATGCCGGTTCCATTTCGCCGAGGTGATGAAGCCGGCCGAGAT GGTGCAGCTTCTCGACCGCATCCGGCTGCGCGGCACACACGGCATCGTGCTCAAGGCGCCTGACGTTGCCGAAGTGGCTG CTGCCGTTGCGCGGGCGGATGCGGCCGGCATTCCGGTGGTGACGCTGGTGACCGACCTGCCGAATTCGGCGCGCATCGCC TATGCCGGCGCCGACAACCGGGCGGCAGGCGAGACCGCCGCCTATCTCATCGGCGAAGTCCTTGCGAGCGGTGGCGGCGG CAAGGTGCTGGTGACGCTGTCGAGCGGGCGGTTTCGGGGCGAGGAGGAGCGCGAGATCGGCTTTCGCCGCATCATCCGCG CCCATTATCCCGGGATCGGCGTCACCGAAATCAGCGAGGGGCACGGCACCGATACGGCGACGGGAACGCTTGCGGCGGCT GCCCTTGCCGCCGATCCCACCATCAATGCCGTCTATTCGATCGGTGGCGGCAACCGGGCTGTGCTGGCAGCCTTCGATGC GGCCAGACGCCCGGTCCACGCCTTCGTCGCCCATGATCTCGACGTCGACAACCGCGCCCTGCTTGCCGCCCGCCGGATCG GCTTCGTGCTGCACCATGATCTCAGGACCGATGCGCGTTCGGCCTTCAGGGCGATCATGGGCCGGGCGACGTCACCGGGT CGGGCGGTTCCGGCCTCGCTCTCATCGGTCGAAATCGTCACGCCTTACAACATGCCCGTCGGCGATTGA
Upstream 100 bases:
>100_bases GTTTTCATGATGGCTCCTCCTCTTTCGATGAAGGCACTATACGCCGCGATGCCGGGTGATATAGATCAGGAATCCATCAA AAAACCATCAAACGGAATCC
Downstream 100 bases:
>100_bases GCCAATTGGCTTCCTTCGATGCCGAATTCGGACTACAGCTTGGGCGAGAGTGAAGGTGAGCGGCATGGATTATAGCGACG TCAGCACAATTGCAGCCTGG
Product: LacI family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein LacI; LacI Family Transcription Regulator; LacI Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator Protein; Regulatory Protein LacI Family; Transcriptional Regulator Protein Laci-Family; LacI Regulatory Protein; Regulatory Protein; Transcriptional Regulator LacI Family Protein; LacI Family Regulatory; Transcription Regulator Protein; HTH-Type Transcriptional Repressor PurR; Transcriptional Regulatory Protein LacI Family; Transcriptional Regulator Protein LacI Family; Transcription Regulator
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAHLFLVKDIAFQAGLSTATVDRVLNGRPGVRQQTEMRVKAAIAELEKQQAGAVASGRMLAVDIVMETPQRFSDAVRAAF EAEMAAFLPGVFRCRFHFAEVMKPAEMVQLLDRIRLRGTHGIVLKAPDVAEVAAAVARADAAGIPVVTLVTDLPNSARIA YAGADNRAAGETAAYLIGEVLASGGGGKVLVTLSSGRFRGEEEREIGFRRIIRAHYPGIGVTEISEGHGTDTATGTLAAA ALAADPTINAVYSIGGGNRAVLAAFDAARRPVHAFVAHDLDVDNRALLAARRIGFVLHHDLRTDARSAFRAIMGRATSPG RAVPASLSSVEIVTPYNMPVGD
Sequences:
>Translated_342_residues MAHLFLVKDIAFQAGLSTATVDRVLNGRPGVRQQTEMRVKAAIAELEKQQAGAVASGRMLAVDIVMETPQRFSDAVRAAF EAEMAAFLPGVFRCRFHFAEVMKPAEMVQLLDRIRLRGTHGIVLKAPDVAEVAAAVARADAAGIPVVTLVTDLPNSARIA YAGADNRAAGETAAYLIGEVLASGGGGKVLVTLSSGRFRGEEEREIGFRRIIRAHYPGIGVTEISEGHGTDTATGTLAAA ALAADPTINAVYSIGGGNRAVLAAFDAARRPVHAFVAHDLDVDNRALLAARRIGFVLHHDLRTDARSAFRAIMGRATSPG RAVPASLSSVEIVTPYNMPVGD >Mature_341_residues AHLFLVKDIAFQAGLSTATVDRVLNGRPGVRQQTEMRVKAAIAELEKQQAGAVASGRMLAVDIVMETPQRFSDAVRAAFE AEMAAFLPGVFRCRFHFAEVMKPAEMVQLLDRIRLRGTHGIVLKAPDVAEVAAAVARADAAGIPVVTLVTDLPNSARIAY AGADNRAAGETAAYLIGEVLASGGGGKVLVTLSSGRFRGEEEREIGFRRIIRAHYPGIGVTEISEGHGTDTATGTLAAAA LAADPTINAVYSIGGGNRAVLAAFDAARRPVHAFVAHDLDVDNRALLAARRIGFVLHHDLRTDARSAFRAIMGRATSPGR AVPASLSSVEIVTPYNMPVGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36096; Mature: 35965
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLFLVKDIAFQAGLSTATVDRVLNGRPGVRQQTEMRVKAAIAELEKQQAGAVASGRML CCEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE AVDIVMETPQRFSDAVRAAFEAEMAAFLPGVFRCRFHFAEVMKPAEMVQLLDRIRLRGTH EEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC GIVLKAPDVAEVAAAVARADAAGIPVVTLVTDLPNSARIAYAGADNRAAGETAAYLIGEV EEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH LASGGGGKVLVTLSSGRFRGEEEREIGFRRIIRAHYPGIGVTEISEGHGTDTATGTLAAA HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHH ALAADPTINAVYSIGGGNRAVLAAFDAARRPVHAFVAHDLDVDNRALLAARRIGFVLHHD HHHCCCCCEEEEEECCCCEEEEEEEHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LRTDARSAFRAIMGRATSPGRAVPASLSSVEIVTPYNMPVGD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC >Mature Secondary Structure AHLFLVKDIAFQAGLSTATVDRVLNGRPGVRQQTEMRVKAAIAELEKQQAGAVASGRML CEEEEEHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEE AVDIVMETPQRFSDAVRAAFEAEMAAFLPGVFRCRFHFAEVMKPAEMVQLLDRIRLRGTH EEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC GIVLKAPDVAEVAAAVARADAAGIPVVTLVTDLPNSARIAYAGADNRAAGETAAYLIGEV EEEEECCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHHH LASGGGGKVLVTLSSGRFRGEEEREIGFRRIIRAHYPGIGVTEISEGHGTDTATGTLAAA HHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHH ALAADPTINAVYSIGGGNRAVLAAFDAARRPVHAFVAHDLDVDNRALLAARRIGFVLHHD HHHCCCCCEEEEEECCCCEEEEEEEHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH LRTDARSAFRAIMGRATSPGRAVPASLSSVEIVTPYNMPVGD HHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA