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The map label for this gene is nodN [H]

Identifier: 209550929

GI number: 209550929

Start: 3461686

End: 3462171

Strand: Direct

Name: nodN [H]

Synonym: Rleg2_3353

Alternate gene names: 209550929

Gene position: 3461686-3462171 (Clockwise)

Preceding gene: 209550928

Following gene: 209550935

Centisome position: 76.28

GC content: 60.49

Gene sequence:

>486_bases
ATGGTCACGGAAATTTCACTCTCCGACGTCCGGGGACTGATCGGCATGGAAACAGGCCTTTCGGACTGGATCACCGTCGA
CCAGACGATGATCGACGCCTTCGCAGGAGCGACCGACGACCATCAGTTCATTCATGTCGACCCCCAGCGCGCGGCCGAAA
GCCCCTTCGGCGGCACCATCGCCCATGGCTTCCTGACGCTGTCTCTGCTGTCGACGATGAACTACAACTGCTTGCCGAAA
GTGCGCGAGCAGACCATGGGCATCAATTACGGTTTCGATCGCGTCCGCTTCATGACGCCGGTGAAAAGCGGCGCCCGCGT
CCGCGGCCGCTTCCTGCTCTCCGACGCCCGCTTCCGCGGCGGCGGCATGCTGATGACCACCTATGACGTCTCGATCGAGA
TCGAAAACGAGAAGAAGCCGGCGCTCACGGCAAAATGGATCACCATCATCCAGTTCGATCCGAAGGATCGTCCCGAGGAC
AAGTAG

Upstream 100 bases:

>100_bases
TAGAAAAGTGACCGCCTCCCCTCGCTTGCGCAAATCCTTGTCGCAATCGTCATAAATGCACGATAAGGCTTTGGCTGGCG
GCCCATCTCACGAGGAATTC

Downstream 100 bases:

>100_bases
ACGGAACGGCGCTTTTGCTTAGATAACCGAATTGAAGACGGCTTCGAGTGCGTGTCCGTCAGGATCCATCACGAACGCCG
CATAATAATGTTCGCCGTAG

Product: MaoC domain-containing protein dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVTEISLSDVRGLIGMETGLSDWITVDQTMIDAFAGATDDHQFIHVDPQRAAESPFGGTIAHGFLTLSLLSTMNYNCLPK
VREQTMGINYGFDRVRFMTPVKSGARVRGRFLLSDARFRGGGMLMTTYDVSIEIENEKKPALTAKWITIIQFDPKDRPED
K

Sequences:

>Translated_161_residues
MVTEISLSDVRGLIGMETGLSDWITVDQTMIDAFAGATDDHQFIHVDPQRAAESPFGGTIAHGFLTLSLLSTMNYNCLPK
VREQTMGINYGFDRVRFMTPVKSGARVRGRFLLSDARFRGGGMLMTTYDVSIEIENEKKPALTAKWITIIQFDPKDRPED
K
>Mature_161_residues
MVTEISLSDVRGLIGMETGLSDWITVDQTMIDAFAGATDDHQFIHVDPQRAAESPFGGTIAHGFLTLSLLSTMNYNCLPK
VREQTMGINYGFDRVRFMTPVKSGARVRGRFLLSDARFRGGGMLMTTYDVSIEIENEKKPALTAKWITIIQFDPKDRPED
K

Specific function: Involved in the production of the root hair deformation (HAD) factor specifically on medicago [H]

COG id: COG2030

COG function: function code I; Acyl dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the R.meliloti counterpart [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002539 [H]

Pfam domain/function: PF01575 MaoC_dehydratas [H]

EC number: NA

Molecular weight: Translated: 18007; Mature: 18007

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTEISLSDVRGLIGMETGLSDWITVDQTMIDAFAGATDDHQFIHVDPQRAAESPFGGTI
CCEECCHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCHH
AHGFLTLSLLSTMNYNCLPKVREQTMGINYGFDRVRFMTPVKSGARVRGRFLLSDARFRG
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEEECCEECC
GGMLMTTYDVSIEIENEKKPALTAKWITIIQFDPKDRPEDK
CCEEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MVTEISLSDVRGLIGMETGLSDWITVDQTMIDAFAGATDDHQFIHVDPQRAAESPFGGTI
CCEECCHHHHHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCHH
AHGFLTLSLLSTMNYNCLPKVREQTMGINYGFDRVRFMTPVKSGARVRGRFLLSDARFRG
HHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEEEECCEECC
GGMLMTTYDVSIEIENEKKPALTAKWITIIQFDPKDRPEDK
CCEEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3132583 [H]