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The map label for this gene is glgB1 [H]

Identifier: 209550924

GI number: 209550924

Start: 3453031

End: 3455238

Strand: Direct

Name: glgB1 [H]

Synonym: Rleg2_3348

Alternate gene names: 209550924

Gene position: 3453031-3455238 (Clockwise)

Preceding gene: 209550923

Following gene: 209550925

Centisome position: 76.09

GC content: 61.91

Gene sequence:

>2208_bases
ATGAAAACGCCGAAAAACGTCCCTGAAGTAAAGCTTTCCTGGGAAATTTCGGCAGATGAAATCGCGGCGATCCTTGCCGG
CTCGCATTCCAATCCCTTTGCCGTCCTAGGGGTGCACCAGGCAGGCGACGCCTTCGTCGCCCGCTGTTTCATCCCGGGCG
CGGAGGAAGTCACCGCCATGACGCTCGACGGCAGCGTCATCGGCGAACTGAAACAGCTCCATGCCGACGGCTTTTTCGCC
GGCCCGGTTTCCCTAACCAAGCTCCAGCCGGTGCGTTACCGCGCCCGGCGTGGCGATGCCGAATGGGCCGTCACCGACCC
CTACAGCTTCGGTCCGGTGCTCGGGCCGATGGACGATTATTTCGCCCGCCAGGGCTCGCATCTGCGCCTGTTCGACAAGA
TGGGCGCCCACCTTATCAAGCATGATGGCGCCCAGGGCATCCATTTCGCCGTCTGGGCCCCGAATGCGCAGCGCGTTTCC
GTGGTCGGCGATTTCAACAATTGGGACGGCCGCCGCCACGTCATGCGCTTCCGCTCCGATAGCGGCATCTGGGAAATCTT
TGCCCCAGATGTGCCGATTGGCGTTGCCTACAAATTCGAGATTCGCGGTCAGGACGGCGTGCTGCTGCCGCTGAAGGCCG
ATCCCTTCGCCCGCCGCAGCGAGCTCCGGCCAAAAACCGCTTCGATCGCCGCCGCCGATTTGGAACAGGAGTGGGAAGAC
GAAGCCCATCTGAAGCACTGGCGCGAAACCGACAAGCGCCGCCAGCCGATCTCGATCTACGAGGTGCATGCCGGCTCATG
GCGGCGCCGCGACGATGGCACGATGCTGTCCTGGGACGAGCTCGCCTCCAGCCTCATCCCCTATTGCGCCGACATGGGCT
TCACCCATATCGAATTCCTGCCGATCACCGAGTACCCATATGACCCCTCCTGGGGGTATCAGACGACCGGCCTCTACGCG
CCGACCGCCCGGTTCGGCGAGCCGGAAGGTTTCGCCCGTTTCGTCAACGGCTGCCACAAGGTCGGCATCGGCGTCATCCT
CGACTGGGTGCCGGCGCATTTCCCGACCGACGAACACGGCCTCGGCTGGTTCGACGGCACGGCGCTCTACGAGCATGAAG
ACCCGCGCAAGGGCTTCCACCCCGACTGGAGCACGGCGATCTATAATTTCGGCCGGACCGAAGTCGTTTCCTACCTCGTC
AACAACGCGCTTTACTGGGCCGAGAAATTCCATCTCGACGGTCTGCGCGTCGACGCCGTCGCCTCGATGCTCTACCTCGA
TTATTCCCGCAAGCACGGCGAATGGATCCCGAACGAATATGGCGGCAACGAGAACCTCGAAGCCGTCCGCTTCCTGCAGG
ATCTCAACACCCGCATCTACGGCAATCATTCCAACGTCATGACCATCGCCGAGGAATCGACCTCCTGGCCGAAGGTCTCC
CAGCCCGTGCATGAAGGTGGCCTCGGCTTCGGCTTCAAGTGGAACATGGGCTTCATGCACGACACGCTGAGCTACATGAG
CCGCGATCCGATATACCGCGGACACCATCACAACGAACTCACCTTCGGCCTGCTCTACGCCTATTCGGAAAATTTCGTCC
TGCCGCTCTCGCATGACGAGGTCGTCCATGGCAAAGGCTCGCTGATCGCCAAGATGCCGGGCGACGACTGGCAGAAATTC
GCCAATCTGCGCGCCTACTACGCCTATATGTGGGGCTATCCCGGCAAGAAGCTGTTGTTCATGGGCCAGGAATTCGCCCA
GTGGAGCGAGTGGAGCGAGGCGAAATCGCTCGACTGGAACTTGCTTCAGTATCGCATGCATGAGGGCATACGGCGCCTGG
TGCGCGACCTCAACTTCACCTATCGCAGCAAGCCGGCGCTGCACGAGCGTGACTGCGAGGGCGAAGGTTTTGAATGGCTG
GTCGCCGACGACCACCAGAATTCCGTCTTTGCCTGGCTGCGCAAGGCGCCGGGCCAGAAGCCGGTCGCCGTCATCACCAA
TTTCACCCCCGTCTATCGCGAGAACTATACGATCCGCCTGCCGTCCGCAGGCCGCTGGCGGGAAATCCTGAACACCGATG
CCGACATCTACGGCGGCAGCGGCAAGGGCAATGGCGGGCGCGTGCAGGCCGTCGATGCCGGCGGCGACATCACCTGCTCG
ATCACCTTGCCGCCCTTGGCGACAATCATGCTTGAACCTGAAAATTAG

Upstream 100 bases:

>100_bases
CCGACTGGTACACCAAGACGATCAACAACACGGCGCGGATGGGCTGGTTCTCGTCCGACCGTACGATCAGGCAATATGCA
GACGAAATCTGGAGAGCCGG

Downstream 100 bases:

>100_bases
TGACTGGTGGGAGGAGAAAATGGTAGAAAAGCGTGTTCAGCCACTTGCCCGCGATGCAATGGCTTATGTTCTGGCCGGCG
GCAGGGGGAGCCGCCTCAAG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 1; Glycogen-branching enzyme 1; BE 1 [H]

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MKTPKNVPEVKLSWEISADEIAAILAGSHSNPFAVLGVHQAGDAFVARCFIPGAEEVTAMTLDGSVIGELKQLHADGFFA
GPVSLTKLQPVRYRARRGDAEWAVTDPYSFGPVLGPMDDYFARQGSHLRLFDKMGAHLIKHDGAQGIHFAVWAPNAQRVS
VVGDFNNWDGRRHVMRFRSDSGIWEIFAPDVPIGVAYKFEIRGQDGVLLPLKADPFARRSELRPKTASIAAADLEQEWED
EAHLKHWRETDKRRQPISIYEVHAGSWRRRDDGTMLSWDELASSLIPYCADMGFTHIEFLPITEYPYDPSWGYQTTGLYA
PTARFGEPEGFARFVNGCHKVGIGVILDWVPAHFPTDEHGLGWFDGTALYEHEDPRKGFHPDWSTAIYNFGRTEVVSYLV
NNALYWAEKFHLDGLRVDAVASMLYLDYSRKHGEWIPNEYGGNENLEAVRFLQDLNTRIYGNHSNVMTIAEESTSWPKVS
QPVHEGGLGFGFKWNMGFMHDTLSYMSRDPIYRGHHHNELTFGLLYAYSENFVLPLSHDEVVHGKGSLIAKMPGDDWQKF
ANLRAYYAYMWGYPGKKLLFMGQEFAQWSEWSEAKSLDWNLLQYRMHEGIRRLVRDLNFTYRSKPALHERDCEGEGFEWL
VADDHQNSVFAWLRKAPGQKPVAVITNFTPVYRENYTIRLPSAGRWREILNTDADIYGGSGKGNGGRVQAVDAGGDITCS
ITLPPLATIMLEPEN

Sequences:

>Translated_735_residues
MKTPKNVPEVKLSWEISADEIAAILAGSHSNPFAVLGVHQAGDAFVARCFIPGAEEVTAMTLDGSVIGELKQLHADGFFA
GPVSLTKLQPVRYRARRGDAEWAVTDPYSFGPVLGPMDDYFARQGSHLRLFDKMGAHLIKHDGAQGIHFAVWAPNAQRVS
VVGDFNNWDGRRHVMRFRSDSGIWEIFAPDVPIGVAYKFEIRGQDGVLLPLKADPFARRSELRPKTASIAAADLEQEWED
EAHLKHWRETDKRRQPISIYEVHAGSWRRRDDGTMLSWDELASSLIPYCADMGFTHIEFLPITEYPYDPSWGYQTTGLYA
PTARFGEPEGFARFVNGCHKVGIGVILDWVPAHFPTDEHGLGWFDGTALYEHEDPRKGFHPDWSTAIYNFGRTEVVSYLV
NNALYWAEKFHLDGLRVDAVASMLYLDYSRKHGEWIPNEYGGNENLEAVRFLQDLNTRIYGNHSNVMTIAEESTSWPKVS
QPVHEGGLGFGFKWNMGFMHDTLSYMSRDPIYRGHHHNELTFGLLYAYSENFVLPLSHDEVVHGKGSLIAKMPGDDWQKF
ANLRAYYAYMWGYPGKKLLFMGQEFAQWSEWSEAKSLDWNLLQYRMHEGIRRLVRDLNFTYRSKPALHERDCEGEGFEWL
VADDHQNSVFAWLRKAPGQKPVAVITNFTPVYRENYTIRLPSAGRWREILNTDADIYGGSGKGNGGRVQAVDAGGDITCS
ITLPPLATIMLEPEN
>Mature_735_residues
MKTPKNVPEVKLSWEISADEIAAILAGSHSNPFAVLGVHQAGDAFVARCFIPGAEEVTAMTLDGSVIGELKQLHADGFFA
GPVSLTKLQPVRYRARRGDAEWAVTDPYSFGPVLGPMDDYFARQGSHLRLFDKMGAHLIKHDGAQGIHFAVWAPNAQRVS
VVGDFNNWDGRRHVMRFRSDSGIWEIFAPDVPIGVAYKFEIRGQDGVLLPLKADPFARRSELRPKTASIAAADLEQEWED
EAHLKHWRETDKRRQPISIYEVHAGSWRRRDDGTMLSWDELASSLIPYCADMGFTHIEFLPITEYPYDPSWGYQTTGLYA
PTARFGEPEGFARFVNGCHKVGIGVILDWVPAHFPTDEHGLGWFDGTALYEHEDPRKGFHPDWSTAIYNFGRTEVVSYLV
NNALYWAEKFHLDGLRVDAVASMLYLDYSRKHGEWIPNEYGGNENLEAVRFLQDLNTRIYGNHSNVMTIAEESTSWPKVS
QPVHEGGLGFGFKWNMGFMHDTLSYMSRDPIYRGHHHNELTFGLLYAYSENFVLPLSHDEVVHGKGSLIAKMPGDDWQKF
ANLRAYYAYMWGYPGKKLLFMGQEFAQWSEWSEAKSLDWNLLQYRMHEGIRRLVRDLNFTYRSKPALHERDCEGEGFEWL
VADDHQNSVFAWLRKAPGQKPVAVITNFTPVYRENYTIRLPSAGRWREILNTDADIYGGSGKGNGGRVQAVDAGGDITCS
ITLPPLATIMLEPEN

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=625, Percent_Identity=26.24, Blast_Score=161, Evalue=2e-39,
Organism=Escherichia coli, GI1789839, Length=734, Percent_Identity=52.8610354223433, Blast_Score=747, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=649, Percent_Identity=24.0369799691834, Blast_Score=158, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI32564391, Length=614, Percent_Identity=23.7785016286645, Blast_Score=136, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6320826, Length=379, Percent_Identity=28.2321899736148, Blast_Score=151, Evalue=3e-37,
Organism=Drosophila melanogaster, GI28573410, Length=607, Percent_Identity=26.8533772652389, Blast_Score=179, Evalue=7e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 83277; Mature: 83277

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTPKNVPEVKLSWEISADEIAAILAGSHSNPFAVLGVHQAGDAFVARCFIPGAEEVTAM
CCCCCCCCCEEEEEEECHHHHHHEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEE
TLDGSVIGELKQLHADGFFAGPVSLTKLQPVRYRARRGDAEWAVTDPYSFGPVLGPMDDY
EECCHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHH
FARQGSHLRLFDKMGAHLIKHDGAQGIHFAVWAPNAQRVSVVGDFNNWDGRRHVMRFRSD
HHCCCCEEEEHHHHCHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHEEECC
SGIWEIFAPDVPIGVAYKFEIRGQDGVLLPLKADPFARRSELRPKTASIAAADLEQEWED
CCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHCH
EAHLKHWRETDKRRQPISIYEVHAGSWRRRDDGTMLSWDELASSLIPYCADMGFTHIEFL
HHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCEEEHHHHHHHHHHHHHHCCCCEEEEE
PITEYPYDPSWGYQTTGLYAPTARFGEPEGFARFVNGCHKVGIGVILDWVPAHFPTDEHG
ECCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCC
LGWFDGTALYEHEDPRKGFHPDWSTAIYNFGRTEVVSYLVNNALYWAEKFHLDGLRVDAV
CCEECCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHEEHHHHCCCCEEHHHH
ASMLYLDYSRKHGEWIPNEYGGNENLEAVRFLQDLNTRIYGNHSNVMTIAEESTSWPKVS
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCC
QPVHEGGLGFGFKWNMGFMHDTLSYMSRDPIYRGHHHNELTFGLLYAYSENFVLPLSHDE
CCHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCC
VVHGKGSLIAKMPGDDWQKFANLRAYYAYMWGYPGKKLLFMGQEFAQWSEWSEAKSLDWN
EEECCCCEEEECCCHHHHHHHHHHEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCCHH
LLQYRMHEGIRRLVRDLNFTYRSKPALHERDCEGEGFEWLVADDHQNSVFAWLRKAPGQK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCC
PVAVITNFTPVYRENYTIRLPSAGRWREILNTDADIYGGSGKGNGGRVQAVDAGGDITCS
CEEEEECCCHHHCCCEEEECCCCCHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCEEEE
ITLPPLATIMLEPEN
EECCCEEEEEECCCC
>Mature Secondary Structure
MKTPKNVPEVKLSWEISADEIAAILAGSHSNPFAVLGVHQAGDAFVARCFIPGAEEVTAM
CCCCCCCCCEEEEEEECHHHHHHEEECCCCCCEEEEEECCCCCEEEEEEECCCCCCEEEE
TLDGSVIGELKQLHADGFFAGPVSLTKLQPVRYRARRGDAEWAVTDPYSFGPVLGPMDDY
EECCHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHCCCCCEEEECCCCCCCCCCCCHHH
FARQGSHLRLFDKMGAHLIKHDGAQGIHFAVWAPNAQRVSVVGDFNNWDGRRHVMRFRSD
HHCCCCEEEEHHHHCHHHHHCCCCCCEEEEEECCCCCEEEEEECCCCCCCHHHHHEEECC
SGIWEIFAPDVPIGVAYKFEIRGQDGVLLPLKADPFARRSELRPKTASIAAADLEQEWED
CCEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHCH
EAHLKHWRETDKRRQPISIYEVHAGSWRRRDDGTMLSWDELASSLIPYCADMGFTHIEFL
HHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCEEEHHHHHHHHHHHHHHCCCCEEEEE
PITEYPYDPSWGYQTTGLYAPTARFGEPEGFARFVNGCHKVGIGVILDWVPAHFPTDEHG
ECCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCHHHEEECCCCCCCCCCCC
LGWFDGTALYEHEDPRKGFHPDWSTAIYNFGRTEVVSYLVNNALYWAEKFHLDGLRVDAV
CCEECCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHEEHHHHCCCCEEHHHH
ASMLYLDYSRKHGEWIPNEYGGNENLEAVRFLQDLNTRIYGNHSNVMTIAEESTSWPKVS
HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCCC
QPVHEGGLGFGFKWNMGFMHDTLSYMSRDPIYRGHHHNELTFGLLYAYSENFVLPLSHDE
CCHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCC
VVHGKGSLIAKMPGDDWQKFANLRAYYAYMWGYPGKKLLFMGQEFAQWSEWSEAKSLDWN
EEECCCCEEEECCCHHHHHHHHHHEEEEEEECCCCCEEEEECHHHHHHHHHHHHCCCCHH
LLQYRMHEGIRRLVRDLNFTYRSKPALHERDCEGEGFEWLVADDHQNSVFAWLRKAPGQK
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCC
PVAVITNFTPVYRENYTIRLPSAGRWREILNTDADIYGGSGKGNGGRVQAVDAGGDITCS
CEEEEECCCHHHCCCEEEECCCCCHHHHHHCCCCCEECCCCCCCCCEEEEEECCCCEEEE
ITLPPLATIMLEPEN
EECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA