| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209550914
Identifier: 209550914
GI number: 209550914
Start: 3435751
End: 3436815
Strand: Reverse
Name: 209550914
Synonym: Rleg2_3338
Alternate gene names: NA
Gene position: 3436815-3435751 (Counterclockwise)
Preceding gene: 209550915
Following gene: 209550912
Centisome position: 75.74
GC content: 62.35
Gene sequence:
>1065_bases ATGAGGAGAGTTTTCATCTTGCTGCTGGCGTTCTGGCCGGGCTCTGCGCTCGCCGATCAGGCCTTCTATGCGGCGAAATC GGGCAATTCAGATGCGCCGGTGCTGACGGTTTATTCCTCGCTCGACGAACCGTTGGCGCAGCCGATGATCCGGGGTTTCC AGGATGCCAATCCCGACGTCGCGGTCAAATACGAAGACATGCTGACCGGCGATATCTATGACCGGATCGTCAGGGAGACG GATGCCGGGAAGAAGACGGCGGATTTTGCCTTTTCCTCGGCGATGGATCTGCAGGTGAAGCTCTCCAACGACGGATATGC GCAGGTCAGCAATCTGCCGATGAGTGCGGCATGGCCGAAATGGGCGAACTGGCGCAACACCGCCTACGCGCTGACCTTCG AGCCGGCGGTGTTCGTCTATCACAAGCCGAGCTTTGTGCATGAACTGGTGCCGAGCTCGCGGGCGGAATTCGTCGATTAC CTGACCCGCAAGGGCAACGACGTCTACGGGCGGATCGGCACCTACGATATCGAGCGCTCCGGCGTCGGGTTTCTGTTCAT GGCGCGTGACCAGGAGCAGTTCGGCGACATCTGGTCGGTGATCGGAGCGATGGGGGCGGCCGGCGTCAAGCTCTATTCGA CGAGTTCGGCGATCCTCGAGCGTGTTGCCGACGGGCGCTTTGTGCTCGGCTACAATATTCTCGGCTCCTATGCGGCCGAC TGGGCCTCGCGCTATCCGGATGTCGGCATCGTGCTGCCGAAAGACTATACCGTGGTGATGTCGCGGATCGGGCTGGTGCC GCAGGCGGCCGCCGAGCCGGAGCTCGGCCGGCGTTACCTGACCTTCTTCATGTCGAGGGAAGGGCAGACGATCATGGCGC GCGAGCTGCAGATTCCGGCCGTCAGCCCTGAGGTGGCCGGCGAAAATACCGCCAATACGCTGCAGGAACTGCTCGGCTCC CAACTGCGGCCGGTGCCGGTCAGTCCCGGGCTGATGGTCTATCTCGACCAGGTGAAACGGGCGCGGCTGATCGCACACTG GAACGAGGTTCTGCGGGCGCAGTGA
Upstream 100 bases:
>100_bases GCACAAAATGCGCTGATGGAATGGGTCGTCGGCTAGTTCCACCGCCCTTGCTCCTGCCAGCGGCCTTGCTCCCCCCGGCG CGCTCAGGCATTGTTGCGGC
Downstream 100 bases:
>100_bases TGAGCCTCAACTTTCGGCCGCTTCGCCCTTTCCGCAAGGAGCGGCGTAAAGCCAATATTCGTAGAACATCGGTCTATCGA CCGTGAAGGGATCTTCCCCC
Product: iron ABC transporter substrate-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MRRVFILLLAFWPGSALADQAFYAAKSGNSDAPVLTVYSSLDEPLAQPMIRGFQDANPDVAVKYEDMLTGDIYDRIVRET DAGKKTADFAFSSAMDLQVKLSNDGYAQVSNLPMSAAWPKWANWRNTAYALTFEPAVFVYHKPSFVHELVPSSRAEFVDY LTRKGNDVYGRIGTYDIERSGVGFLFMARDQEQFGDIWSVIGAMGAAGVKLYSTSSAILERVADGRFVLGYNILGSYAAD WASRYPDVGIVLPKDYTVVMSRIGLVPQAAAEPELGRRYLTFFMSREGQTIMARELQIPAVSPEVAGENTANTLQELLGS QLRPVPVSPGLMVYLDQVKRARLIAHWNEVLRAQ
Sequences:
>Translated_354_residues MRRVFILLLAFWPGSALADQAFYAAKSGNSDAPVLTVYSSLDEPLAQPMIRGFQDANPDVAVKYEDMLTGDIYDRIVRET DAGKKTADFAFSSAMDLQVKLSNDGYAQVSNLPMSAAWPKWANWRNTAYALTFEPAVFVYHKPSFVHELVPSSRAEFVDY LTRKGNDVYGRIGTYDIERSGVGFLFMARDQEQFGDIWSVIGAMGAAGVKLYSTSSAILERVADGRFVLGYNILGSYAAD WASRYPDVGIVLPKDYTVVMSRIGLVPQAAAEPELGRRYLTFFMSREGQTIMARELQIPAVSPEVAGENTANTLQELLGS QLRPVPVSPGLMVYLDQVKRARLIAHWNEVLRAQ >Mature_354_residues MRRVFILLLAFWPGSALADQAFYAAKSGNSDAPVLTVYSSLDEPLAQPMIRGFQDANPDVAVKYEDMLTGDIYDRIVRET DAGKKTADFAFSSAMDLQVKLSNDGYAQVSNLPMSAAWPKWANWRNTAYALTFEPAVFVYHKPSFVHELVPSSRAEFVDY LTRKGNDVYGRIGTYDIERSGVGFLFMARDQEQFGDIWSVIGAMGAAGVKLYSTSSAILERVADGRFVLGYNILGSYAAD WASRYPDVGIVLPKDYTVVMSRIGLVPQAAAEPELGRRYLTFFMSREGQTIMARELQIPAVSPEVAGENTANTLQELLGS QLRPVPVSPGLMVYLDQVKRARLIAHWNEVLRAQ
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39253; Mature: 39253
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVFILLLAFWPGSALADQAFYAAKSGNSDAPVLTVYSSLDEPLAQPMIRGFQDANPDV CCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHCHHHHHHHHHHHCCCCCCE AVKYEDMLTGDIYDRIVRETDAGKKTADFAFSSAMDLQVKLSNDGYAQVSNLPMSAAWPK EEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCCC WANWRNTAYALTFEPAVFVYHKPSFVHELVPSSRAEFVDYLTRKGNDVYGRIGTYDIERS CCCCCCCEEEEEECCEEEEEECCHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCEEECCC GVGFLFMARDQEQFGDIWSVIGAMGAAGVKLYSTSSAILERVADGRFVLGYNILGSYAAD CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEEEHHHHHHHHHH WASRYPDVGIVLPKDYTVVMSRIGLVPQAAAEPELGRRYLTFFMSREGQTIMARELQIPA HHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCC VSPEVAGENTANTLQELLGSQLRPVPVSPGLMVYLDQVKRARLIAHWNEVLRAQ CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRRVFILLLAFWPGSALADQAFYAAKSGNSDAPVLTVYSSLDEPLAQPMIRGFQDANPDV CCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHCHHHHHHHHHHHCCCCCCE AVKYEDMLTGDIYDRIVRETDAGKKTADFAFSSAMDLQVKLSNDGYAQVSNLPMSAAWPK EEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEECCCCCEEECCCCCCCCCCC WANWRNTAYALTFEPAVFVYHKPSFVHELVPSSRAEFVDYLTRKGNDVYGRIGTYDIERS CCCCCCCEEEEEECCEEEEEECCHHHHHHCCCHHHHHHHHHHHCCCEEEEECCCEEECCC GVGFLFMARDQEQFGDIWSVIGAMGAAGVKLYSTSSAILERVADGRFVLGYNILGSYAAD CCEEEEEECCHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHCCCCEEEEHHHHHHHHHH WASRYPDVGIVLPKDYTVVMSRIGLVPQAAAEPELGRRYLTFFMSREGQTIMARELQIPA HHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCC VSPEVAGENTANTLQELLGSQLRPVPVSPGLMVYLDQVKRARLIAHWNEVLRAQ CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA