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The map label for this gene is 209550904

Identifier: 209550904

GI number: 209550904

Start: 3426801

End: 3427526

Strand: Reverse

Name: 209550904

Synonym: Rleg2_3328

Alternate gene names: NA

Gene position: 3427526-3426801 (Counterclockwise)

Preceding gene: 209550906

Following gene: 209550900

Centisome position: 75.53

GC content: 69.42

Gene sequence:

>726_bases
ATGGCCAAGACAGCGACACGCGGCCGCCGCAAGGCGCCGGCCAGAGGAAAGAGCAAAGCGCGCAGCAGCGGTGGCGGATT
GCTGCCCTGGGCGGTGATCGGCATTGCCGCGATCGGCGGCATCGTCGCCCACGACCATTGGAAGAGCATTCAGCCGATGC
TTGCCCGGCAATCGGCGCCGGTGGCGCGCGAAACGGCGGAACCCAGACCTGCCGCCAGGAAGGACGTGCCGCCGAAGCAG
GTGGCGCTCGCCACACCCACGCCGAAAGCCGTCCCGCCGGCGCCGCAATCGCAGCTGCTGCCGCCGGCGACGATCCCGAC
GCCGGCTGTCCAGCCGGTCAAGGCGGTGCCGTCCCCGCTTACCCCCGCCAATCCGGAAACCGGGACAATCGCCTTTGGTT
ATTGCGGGCAGGGCGCCCATATCAACTGCGTCGGCGATGGCGGCGTCTTCTGGTACAAGGGCGAGAAGATCGTGATCGCC
GATATGGCAAGCCCTGTCGTCGACCAGGCGCGCTGTGACGGCGAACGCAGGGTGGCCTTTGCCGCCAAGTCGCGGCTGCT
GGCGCTTCTGAACGCCGGTCCCTTCACCATGAATGCCGCGGGCAAGGCTGAGTCATCAGGAGCGCCGCGCGTCGTCTCGC
GCGACGGGCGCTCGTTCGGCGCGCAGCTGATCAATGAAGGGCTGGCGCGCAAGCCGGGCGCTGCCGGCGGCGCGTGGTGC
GCCTGA

Upstream 100 bases:

>100_bases
TCGCATGAAAGATCGGCGAACCCGGCATCGTCGTGTCGCCGCGCCAACCTTTCAGAAAGGATTGGGCGGCGATAATCCCG
GCCTCACGGGAATCGGACAG

Downstream 100 bases:

>100_bases
CGGCTAGAACATTTTCACACAATCCCGGACGCTAAACCGCTGCGCGCTTTTGCCGGGATTGCTCTACTTTCCCTTTTTCA
CCAGCTTGCCGCCGGTGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Nuclease Protein; Orf_Bo

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAKTATRGRRKAPARGKSKARSSGGGLLPWAVIGIAAIGGIVAHDHWKSIQPMLARQSAPVARETAEPRPAARKDVPPKQ
VALATPTPKAVPPAPQSQLLPPATIPTPAVQPVKAVPSPLTPANPETGTIAFGYCGQGAHINCVGDGGVFWYKGEKIVIA
DMASPVVDQARCDGERRVAFAAKSRLLALLNAGPFTMNAAGKAESSGAPRVVSRDGRSFGAQLINEGLARKPGAAGGAWC
A

Sequences:

>Translated_241_residues
MAKTATRGRRKAPARGKSKARSSGGGLLPWAVIGIAAIGGIVAHDHWKSIQPMLARQSAPVARETAEPRPAARKDVPPKQ
VALATPTPKAVPPAPQSQLLPPATIPTPAVQPVKAVPSPLTPANPETGTIAFGYCGQGAHINCVGDGGVFWYKGEKIVIA
DMASPVVDQARCDGERRVAFAAKSRLLALLNAGPFTMNAAGKAESSGAPRVVSRDGRSFGAQLINEGLARKPGAAGGAWC
A
>Mature_240_residues
AKTATRGRRKAPARGKSKARSSGGGLLPWAVIGIAAIGGIVAHDHWKSIQPMLARQSAPVARETAEPRPAARKDVPPKQV
ALATPTPKAVPPAPQSQLLPPATIPTPAVQPVKAVPSPLTPANPETGTIAFGYCGQGAHINCVGDGGVFWYKGEKIVIAD
MASPVVDQARCDGERRVAFAAKSRLLALLNAGPFTMNAAGKAESSGAPRVVSRDGRSFGAQLINEGLARKPGAAGGAWCA

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24767; Mature: 24636

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTATRGRRKAPARGKSKARSSGGGLLPWAVIGIAAIGGIVAHDHWKSIQPMLARQSAP
CCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VARETAEPRPAARKDVPPKQVALATPTPKAVPPAPQSQLLPPATIPTPAVQPVKAVPSPL
CHHHCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
TPANPETGTIAFGYCGQGAHINCVGDGGVFWYKGEKIVIADMASPVVDQARCDGERRVAF
CCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCEEEEECCCCHHHHHHHCCCCCEEHH
AAKSRLLALLNAGPFTMNAAGKAESSGAPRVVSRDGRSFGAQLINEGLARKPGAAGGAWC
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
A
C
>Mature Secondary Structure 
AKTATRGRRKAPARGKSKARSSGGGLLPWAVIGIAAIGGIVAHDHWKSIQPMLARQSAP
CCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VARETAEPRPAARKDVPPKQVALATPTPKAVPPAPQSQLLPPATIPTPAVQPVKAVPSPL
CHHHCCCCCCCCCCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
TPANPETGTIAFGYCGQGAHINCVGDGGVFWYKGEKIVIADMASPVVDQARCDGERRVAF
CCCCCCCCEEEEEECCCCCEEEEEECCCEEEEECCEEEEECCCCHHHHHHHCCCCCEEHH
AAKSRLLALLNAGPFTMNAAGKAESSGAPRVVSRDGRSFGAQLINEGLARKPGAAGGAWC
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA