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The map label for this gene is ropA [H]

Identifier: 209550902

GI number: 209550902

Start: 3424832

End: 3425875

Strand: Direct

Name: ropA [H]

Synonym: Rleg2_3326

Alternate gene names: 209550902

Gene position: 3424832-3425875 (Clockwise)

Preceding gene: 209550901

Following gene: 209550903

Centisome position: 75.47

GC content: 60.73

Gene sequence:

>1044_bases
ATGAACATCAAGAGCCTTCTTCTCGGCTCCGCTGCTGCTCTCGCAGTAGTATCCGGCGCTCAGGCTGCTGACGCTATCGT
TGCTGCCGAGCCGGAACCGGTTGAATACGTCCGCGTCTGCGACGCTTATGGCACCGGCTATTTCTACATCCCGGGCACCG
AAACCTGCCTGAAGATCAACGGTTACATCCGCTTCCAGGTTGACGTCGCTCCGAACGCCAGCTCGATCGGCGCCAGCGGC
GGCGGTTCTGTCGCCAACGACTCGGATTGGGACGCCCGTACGCGCGGCCAGGTTCAGTTCACCGCCAAGAGCGACACCGA
ATACGGTCCGCTAACCGGCGTCATCGTCATGCAGTTCAATGCTGACAACGCTTCGGCTCAGAAGGCTCAGCTCGACTCCG
CTTACATCGACATCGCCGGCTTCCGCGCTGGTCTGTTCTACAGCTGGTGGGACGACGGCCTCTCGGGCGAAACCGACGAC
ATCGGTTCACCGGTCACGCTGCATAACTCCATCCGTTATCAGTACGAAACCGACGCCTTCTACGCCGGCATCAGCGTCGA
CGAGCTGGAAGACAGCCCGTTCTATGACGGCGAAACTGCCAACAACGTCGGCGTTGCCGTCGGTCTCGGCGGCAAGGCCG
GTGCCTTCAGCTACCAGATCACTGCTGGCTACGACACCGACAACGAAGAAGGCGCCGTCCGCGCCATGGGTACGGTTGCT
GTCGGTCCGGGCACGCTCGGCCTCGCAGTTGTCTACGCAACGAACCCGAACGCCTACTACAACAAGGCTGAATGGGCGAT
CGCTGCCGAATACGCCATCAAGGCGACTGACAAGCTGAAGATCACCCCGGCTGTTCAGTACTACGACAACTACGGCGTCA
CTGCAGGCGAGTTCAATGACGACGTCAGCGCCTGGAAGGCCGGCGTAACGATCGACTACCAGATCGTCGACAACCTCGCA
GCCAAGGTCTCGGTTCAGTACCTCGATCCGGACAACGCTGCTGACGTAACCTCGGGCTACTTCCGCCTGCAGCGCGCGTT
CTAA

Upstream 100 bases:

>100_bases
AGCCAAACAGGTGCCGCTTCGCTCACACGGGATGAAGATCCGTAGGGACTGCCGATGGCAACGGTCTTCATCCTCTTGCA
TCTGAACTGGAGGTTATTCC

Downstream 100 bases:

>100_bases
TAAAAGGCTGCTGGCTACTTGCTACGGCGCTGTAAGCCGGCAGCCACAAATTCCTGATCCGACTGACCTCCGATCGGGAA
AGAATGGGCCTGGACTTCCC

Product: porin

Products: NA

Alternate protein names: OMPIIIA [H]

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKINGYIRFQVDVAPNASSIGASG
GGSVANDSDWDARTRGQVQFTAKSDTEYGPLTGVIVMQFNADNASAQKAQLDSAYIDIAGFRAGLFYSWWDDGLSGETDD
IGSPVTLHNSIRYQYETDAFYAGISVDELEDSPFYDGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVA
VGPGTLGLAVVYATNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEFNDDVSAWKAGVTIDYQIVDNLA
AKVSVQYLDPDNAADVTSGYFRLQRAF

Sequences:

>Translated_347_residues
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKINGYIRFQVDVAPNASSIGASG
GGSVANDSDWDARTRGQVQFTAKSDTEYGPLTGVIVMQFNADNASAQKAQLDSAYIDIAGFRAGLFYSWWDDGLSGETDD
IGSPVTLHNSIRYQYETDAFYAGISVDELEDSPFYDGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVA
VGPGTLGLAVVYATNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEFNDDVSAWKAGVTIDYQIVDNLA
AKVSVQYLDPDNAADVTSGYFRLQRAF
>Mature_347_residues
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKINGYIRFQVDVAPNASSIGASG
GGSVANDSDWDARTRGQVQFTAKSDTEYGPLTGVIVMQFNADNASAQKAQLDSAYIDIAGFRAGLFYSWWDDGLSGETDD
IGSPVTLHNSIRYQYETDAFYAGISVDELEDSPFYDGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVA
VGPGTLGLAVVYATNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEFNDDVSAWKAGVTIDYQIVDNLA
AKVSVQYLDPDNAADVTSGYFRLQRAF

Specific function: May act as an outer membrane pore [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alphaproteobacteria porin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003684 [H]

Pfam domain/function: PF02530 Porin_2 [H]

EC number: NA

Molecular weight: Translated: 36825; Mature: 36825

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIN
CCHHHHHHCCCEEEEEECCCCHHCEEEECCCCCCEEEEEEHHCCCCEEEECCCCEEEEEE
GYIRFQVDVAPNASSIGASGGGSVANDSDWDARTRGQVQFTAKSDTEYGPLTGVIVMQFN
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEC
ADNASAQKAQLDSAYIDIAGFRAGLFYSWWDDGLSGETDDIGSPVTLHNSIRYQYETDAF
CCCCCCHHHCCCCEEEEEEECEECEEEEECCCCCCCCCCCCCCCEEEECCEEEEEECCEE
YAGISVDELEDSPFYDGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVA
EECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEE
VGPGTLGLAVVYATNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEFND
ECCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCC
DVSAWKAGVTIDYQIVDNLAAKVSVQYLDPDNAADVTSGYFRLQRAF
CHHHHHCCCEEEEHHHHCCEEEEEEEEECCCCCCHHCCCEEEEEECC
>Mature Secondary Structure
MNIKSLLLGSAAALAVVSGAQAADAIVAAEPEPVEYVRVCDAYGTGYFYIPGTETCLKIN
CCHHHHHHCCCEEEEEECCCCHHCEEEECCCCCCEEEEEEHHCCCCEEEECCCCEEEEEE
GYIRFQVDVAPNASSIGASGGGSVANDSDWDARTRGQVQFTAKSDTEYGPLTGVIVMQFN
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEEEEC
ADNASAQKAQLDSAYIDIAGFRAGLFYSWWDDGLSGETDDIGSPVTLHNSIRYQYETDAF
CCCCCCHHHCCCCEEEEEEECEECEEEEECCCCCCCCCCCCCCCEEEECCEEEEEECCEE
YAGISVDELEDSPFYDGETANNVGVAVGLGGKAGAFSYQITAGYDTDNEEGAVRAMGTVA
EECCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCCCCEEEEEEEEE
VGPGTLGLAVVYATNPNAYYNKAEWAIAAEYAIKATDKLKITPAVQYYDNYGVTAGEFND
ECCCCEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCEEEEEEEEEEECCCCCCCCCCCC
DVSAWKAGVTIDYQIVDNLAAKVSVQYLDPDNAADVTSGYFRLQRAF
CHHHHHCCCEEEEHHHHCCEEEEEEEEECCCCCCHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1370281 [H]