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The map label for this gene is yrbH [C]

Identifier: 209550883

GI number: 209550883

Start: 3395929

End: 3396924

Strand: Reverse

Name: yrbH [C]

Synonym: Rleg2_3307

Alternate gene names: 209550883

Gene position: 3396924-3395929 (Counterclockwise)

Preceding gene: 209550885

Following gene: 209550871

Centisome position: 74.86

GC content: 60.74

Gene sequence:

>996_bases
ATGAACAGAAGAGCGATAAACCTCGTTGAAAACAGCGTGCTCGAATCGGCAAAACGCACGATTGAGACCGAAAGACGCGG
CCTTGAAGCGCTCGAACAGGCCTTCGACAATGGATTGGCCGGTCCTTTCACACGCGCTGTCGAAGTTATCGGCGATATCA
CCGGACGTGTTATCGTCACCGGCGTCGGTAAGAGCGGGCACATCGGCGTTAAGATTGCTGCAACCCTTGCTTCAACGGGC
ACGCCCGCATTCTTCGTGCACGCGGCCGAGGCCAATCACGGCGATCTCGGCATGATCGGGCAAGGTGATGCAATCATCGC
CGTTTCCTGGAGCGGACAGGCGCAAGAACTCAAGGCGATCCTCTCCTATTCCAGGCGTTTTTCCATTCCACTGATCGCCA
TTACCTATGATGAGGAATCGAGCCTCGGCCTAGCTGCGGATATCGTATTGAAACTGCCGAAGGAAACGGAAGCTTGCCCG
CATGGCTTGGCGCCTACAACCTCGGCTATTATGCAGCTTGCGATCGGCGACGCGCTGGCCGTGGCGCTGTTGGAGGCGCG
CGGCTTTACCGCCACTGATTTCCACGTATTCCATCCCGGCGGCAAGCTGGGCGCGAGCCTGATGCACGTCGCCGATATCA
TGCATACCGGCGAGCGGCTGCCGCTCGTCGCCAAGGGCACGGCGATGCCGGAGGCAATCACGGTGCTGTCGCGCAAGCAT
TTCGGCTGCGTCGGCGTGCTTGACGGGGACGGGCGGCTCTGTGGCATCGTCACCGAAGGCGACATGGCCCGAAACCTGAC
CCGCAATCTTTCAGAGCTTGCCGTCGACGACATCATGACGCGGACGCCGAAGACGGTGAAGCCGACGATGCTGGCGACCG
CCGCGCTGGCGCTGCTCAACCAACATCACATCGGCGCGCTGATCGTCATCGACGAAGACCACCGGCCGGTCGGGCTGGTG
CATTTCCACGATCTGCTGCGGATCGGCGTCGCCTGA

Upstream 100 bases:

>100_bases
AGCCTCGTGGTTAATCATTCGTTGCCGACGGCGGGCGCCGTTCACATTTCAGAAAGAGTGCGGGGTGGACTTGGAAAGTG
AAAAGGTCTAACGCAACTTC

Downstream 100 bases:

>100_bases
TCAGAGCTGTGAATCAGACAGAGACAGGCTCGACCGTCAGGTCGCGGCCGTTGCTCGACACCACCTTCACCTGTGTTCCC
GCCGGCAGGTCCGGTCCCAT

Product: KpsF/GutQ family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVIGDITGRVIVTGVGKSGHIGVKIAATLASTG
TPAFFVHAAEANHGDLGMIGQGDAIIAVSWSGQAQELKAILSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKETEACP
HGLAPTTSAIMQLAIGDALAVALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTAMPEAITVLSRKH
FGCVGVLDGDGRLCGIVTEGDMARNLTRNLSELAVDDIMTRTPKTVKPTMLATAALALLNQHHIGALIVIDEDHRPVGLV
HFHDLLRIGVA

Sequences:

>Translated_331_residues
MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVIGDITGRVIVTGVGKSGHIGVKIAATLASTG
TPAFFVHAAEANHGDLGMIGQGDAIIAVSWSGQAQELKAILSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKETEACP
HGLAPTTSAIMQLAIGDALAVALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTAMPEAITVLSRKH
FGCVGVLDGDGRLCGIVTEGDMARNLTRNLSELAVDDIMTRTPKTVKPTMLATAALALLNQHHIGALIVIDEDHRPVGLV
HFHDLLRIGVA
>Mature_331_residues
MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVIGDITGRVIVTGVGKSGHIGVKIAATLASTG
TPAFFVHAAEANHGDLGMIGQGDAIIAVSWSGQAQELKAILSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKETEACP
HGLAPTTSAIMQLAIGDALAVALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTAMPEAITVLSRKH
FGCVGVLDGDGRLCGIVTEGDMARNLTRNLSELAVDDIMTRTPKTVKPTMLATAALALLNQHHIGALIVIDEDHRPVGLV
HFHDLLRIGVA

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=319, Percent_Identity=45.7680250783699, Blast_Score=262, Evalue=2e-71,
Organism=Escherichia coli, GI87082151, Length=294, Percent_Identity=43.5374149659864, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 34986; Mature: 34986

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVIGDITGRVIVT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE
GVGKSGHIGVKIAATLASTGTPAFFVHAAEANHGDLGMIGQGDAIIAVSWSGQAQELKAI
ECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCEEEEEECCCCHHHHHHH
LSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKETEACPHGLAPTTSAIMQLAIGDALA
HHHHHCCCCEEEEEEECCCCCCCEEEEHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTAMPEAITVLSRKH
HHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCC
FGCVGVLDGDGRLCGIVTEGDMARNLTRNLSELAVDDIMTRTPKTVKPTMLATAALALLN
CCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
QHHIGALIVIDEDHRPVGLVHFHDLLRIGVA
CCCCEEEEEEECCCCCEEHHHHHHHHHHCCC
>Mature Secondary Structure
MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVIGDITGRVIVT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE
GVGKSGHIGVKIAATLASTGTPAFFVHAAEANHGDLGMIGQGDAIIAVSWSGQAQELKAI
ECCCCCCEEEEEEEEECCCCCCEEEEEEECCCCCCEEEECCCCEEEEEECCCCHHHHHHH
LSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKETEACPHGLAPTTSAIMQLAIGDALA
HHHHHCCCCEEEEEEECCCCCCCEEEEHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTAMPEAITVLSRKH
HHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCC
FGCVGVLDGDGRLCGIVTEGDMARNLTRNLSELAVDDIMTRTPKTVKPTMLATAALALLN
CCEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
QHHIGALIVIDEDHRPVGLVHFHDLLRIGVA
CCCCEEEEEEECCCCCEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]