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The map label for this gene is hss [H]

Identifier: 209550876

GI number: 209550876

Start: 3388620

End: 3390071

Strand: Direct

Name: hss [H]

Synonym: Rleg2_3300

Alternate gene names: 209550876

Gene position: 3388620-3390071 (Clockwise)

Preceding gene: 209550875

Following gene: 209550877

Centisome position: 74.67

GC content: 61.64

Gene sequence:

>1452_bases
ATGACGGAACAGAACTATCCGGTATATGCCGAAATTACCGGTCCGATCGTGATGATCGGCTTTGGCTCCATCGGCCGCGG
CACCCTGCCCCTGATCGAGCGCCACTTCAAATTCGACAAGAGCCGGATGGTCGTCATCGACCCGCGCGAAGAGCCCTCCG
ACATGGAGATCCTCAAGAAGCACGGCGTTCGCCATATCAAGGAATATGTCACCAAGGACAATTACAAGGAGCTGCTGAAG
CCGCTGCTGACCGAAGGCGAAGGCCAGGGTTTCTGCGTCAACCTCTCGGTCGACACCTCCTCGCTCGACCTTATCAAGCT
CTGCCGCAAGCATGACGTGCTCTACGTCGACACCGTCGTCGAACCCTGGCTCGGCTTCTATTTCGACAAGGGCATGAGCA
ATGCCGACCGCACCAACTATGCGCTGCGCGAAACCGTGCGCAAGGAAAAGGCGAAGAACCCGGGCGGCGCCACCGCCGTT
TCCACCTGCGGCGCCAATCCGGGCATGGTCTCCTGGTTCGTCAAGCAGGCGCTCGTCAACCTCGCCAACGACACCGGCCT
GAAGTTCGACGAACCGGACCAGCACGACCGCGAAGGCTGGGCCAAGCTGATGAAGAAGCTCGGCGTCAAGGGCGTCCACA
TCGCCGAGCGCGACACCCAGCGCACCAAGCATCCGAAGCCGCTCAACGTCTTCTGGAACACCTGGTCCGTCGAAGGCTTC
ATCTCCGAAGGCCTGCAGCCGGCCGAACTCGGCTGGGGCACCCATGAAGAATGGATGCCGAAGAACGCCAAGAAGCACAA
GAAGGGCAACAAGGCAGCGATCTATCTGGAGCAGCCTGGCGCCAACACCCGCGTGCGCACCTGGTGCCCGACGCCCGGCC
CGCAATATGGCTTCCTCGTCACCCACAATGAGTCGATCTCGATCGCCGACTACTTCACCGTTCGCGACAAGGACGGCGAA
GTGACCTTCCGCCCAACCTGCCACTATGCCTACCATCCGGCCAACGACGCCGTGCTCTCGCTTCACGAGATGTTCGGCAA
TGGCGGCACGCCGCAGCCGGTCCATCACGTTCTCGACGAGGACGAGTTGGAAGACGGCATCGACGAACTCGGCGTCCTGC
TCTACGGCCACGAGAAGAACGCCTACTGGTTTGGCTCGCGTCTGTCGCTGGAAGAAACGCGCCGCATCGCGCCCTATCAG
AACGCCACCGGCCTGCAGGTCACCTCAGCCGTTCTCGCCGGCATGGTCTGGGCGCTGGAAAACCCGAAGGCCGGCATCGT
CGAAGCCGACGAGATCGACTACAAGCGCTGCCTCGAAGTGCAGATGCCTTACCTCGGCCCGGTCGAAGGACATTACACCG
ACTGGACCCCGCTCGATGGCCGCCCGGGCCTGTTCCCCGAGGATATCGACACCAAGGATCCGTGGCAGTTCAGGAACATT
CTCGTTCGCTGA

Upstream 100 bases:

>100_bases
GCCGATTTGTGGTTAGAGCCGGTCACCTCGCAATTTCTGCGGCAATTTCAAAAGAATTCTTCAGGCTGAACGCCTTCGTC
CTCTTCCACAGGAGAAAAGA

Downstream 100 bases:

>100_bases
GATCGCTCGCGCAAGTTTGAAAATGCCCGCCGCAAGGCGGGCATTTTTGTAACGCCTGCTGTCTAAATGCCGCCCGGCAC
CCCGCCAAGGCTTGCCTTCG

Product: homospermidine synthase

Products: NA

Alternate protein names: HSS [H]

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MTEQNYPVYAEITGPIVMIGFGSIGRGTLPLIERHFKFDKSRMVVIDPREEPSDMEILKKHGVRHIKEYVTKDNYKELLK
PLLTEGEGQGFCVNLSVDTSSLDLIKLCRKHDVLYVDTVVEPWLGFYFDKGMSNADRTNYALRETVRKEKAKNPGGATAV
STCGANPGMVSWFVKQALVNLANDTGLKFDEPDQHDREGWAKLMKKLGVKGVHIAERDTQRTKHPKPLNVFWNTWSVEGF
ISEGLQPAELGWGTHEEWMPKNAKKHKKGNKAAIYLEQPGANTRVRTWCPTPGPQYGFLVTHNESISIADYFTVRDKDGE
VTFRPTCHYAYHPANDAVLSLHEMFGNGGTPQPVHHVLDEDELEDGIDELGVLLYGHEKNAYWFGSRLSLEETRRIAPYQ
NATGLQVTSAVLAGMVWALENPKAGIVEADEIDYKRCLEVQMPYLGPVEGHYTDWTPLDGRPGLFPEDIDTKDPWQFRNI
LVR

Sequences:

>Translated_483_residues
MTEQNYPVYAEITGPIVMIGFGSIGRGTLPLIERHFKFDKSRMVVIDPREEPSDMEILKKHGVRHIKEYVTKDNYKELLK
PLLTEGEGQGFCVNLSVDTSSLDLIKLCRKHDVLYVDTVVEPWLGFYFDKGMSNADRTNYALRETVRKEKAKNPGGATAV
STCGANPGMVSWFVKQALVNLANDTGLKFDEPDQHDREGWAKLMKKLGVKGVHIAERDTQRTKHPKPLNVFWNTWSVEGF
ISEGLQPAELGWGTHEEWMPKNAKKHKKGNKAAIYLEQPGANTRVRTWCPTPGPQYGFLVTHNESISIADYFTVRDKDGE
VTFRPTCHYAYHPANDAVLSLHEMFGNGGTPQPVHHVLDEDELEDGIDELGVLLYGHEKNAYWFGSRLSLEETRRIAPYQ
NATGLQVTSAVLAGMVWALENPKAGIVEADEIDYKRCLEVQMPYLGPVEGHYTDWTPLDGRPGLFPEDIDTKDPWQFRNI
LVR
>Mature_482_residues
TEQNYPVYAEITGPIVMIGFGSIGRGTLPLIERHFKFDKSRMVVIDPREEPSDMEILKKHGVRHIKEYVTKDNYKELLKP
LLTEGEGQGFCVNLSVDTSSLDLIKLCRKHDVLYVDTVVEPWLGFYFDKGMSNADRTNYALRETVRKEKAKNPGGATAVS
TCGANPGMVSWFVKQALVNLANDTGLKFDEPDQHDREGWAKLMKKLGVKGVHIAERDTQRTKHPKPLNVFWNTWSVEGFI
SEGLQPAELGWGTHEEWMPKNAKKHKKGNKAAIYLEQPGANTRVRTWCPTPGPQYGFLVTHNESISIADYFTVRDKDGEV
TFRPTCHYAYHPANDAVLSLHEMFGNGGTPQPVHHVLDEDELEDGIDELGVLLYGHEKNAYWFGSRLSLEETRRIAPYQN
ATGLQVTSAVLAGMVWALENPKAGIVEADEIDYKRCLEVQMPYLGPVEGHYTDWTPLDGRPGLFPEDIDTKDPWQFRNIL
VR

Specific function: Involved in the NAD(+)-dependent synthesis of the polyamine homospermidine from putrescine [H]

COG id: COG5310

COG function: function code Q; Homospermidine synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023181
- InterPro:   IPR016040
- InterPro:   IPR005097 [H]

Pfam domain/function: PF03435 Saccharop_dh [H]

EC number: =2.5.1.44 [H]

Molecular weight: Translated: 54613; Mature: 54482

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQNYPVYAEITGPIVMIGFGSIGRGTLPLIERHFKFDKSRMVVIDPREEPSDMEILKK
CCCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH
HGVRHIKEYVTKDNYKELLKPLLTEGEGQGFCVNLSVDTSSLDLIKLCRKHDVLYVDTVV
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCEEEEHHHH
EPWLGFYFDKGMSNADRTNYALRETVRKEKAKNPGGATAVSTCGANPGMVSWFVKQALVN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHCCCCCCCHHHHHHHHHHHH
LANDTGLKFDEPDQHDREGWAKLMKKLGVKGVHIAERDTQRTKHPKPLNVFWNTWSVEGF
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCEEEEECEEEHHH
ISEGLQPAELGWGTHEEWMPKNAKKHKKGNKAAIYLEQPGANTRVRTWCPTPGPQYGFLV
HHCCCCHHHCCCCCCHHHCCCCCHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEE
THNESISIADYFTVRDKDGEVTFRPTCHYAYHPANDAVLSLHEMFGNGGTPQPVHHVLDE
EECCCEEEEEEEEEECCCCCEEEEECCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCH
DELEDGIDELGVLLYGHEKNAYWFGSRLSLEETRRIAPYQNATGLQVTSAVLAGMVWALE
HHHHHCHHHCCEEEEECCCCCEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEC
NPKAGIVEADEIDYKRCLEVQMPYLGPVEGHYTDWTPLDGRPGLFPEDIDTKDPWQFRNI
CCCCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LVR
HCC
>Mature Secondary Structure 
TEQNYPVYAEITGPIVMIGFGSIGRGTLPLIERHFKFDKSRMVVIDPREEPSDMEILKK
CCCCCCEEEEECCCEEEEECCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHH
HGVRHIKEYVTKDNYKELLKPLLTEGEGQGFCVNLSVDTSSLDLIKLCRKHDVLYVDTVV
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCEEEEHHHH
EPWLGFYFDKGMSNADRTNYALRETVRKEKAKNPGGATAVSTCGANPGMVSWFVKQALVN
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEHCCCCCCCHHHHHHHHHHHH
LANDTGLKFDEPDQHDREGWAKLMKKLGVKGVHIAERDTQRTKHPKPLNVFWNTWSVEGF
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHCCCCCCCEEEEECEEEHHH
ISEGLQPAELGWGTHEEWMPKNAKKHKKGNKAAIYLEQPGANTRVRTWCPTPGPQYGFLV
HHCCCCHHHCCCCCCHHHCCCCCHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEE
THNESISIADYFTVRDKDGEVTFRPTCHYAYHPANDAVLSLHEMFGNGGTPQPVHHVLDE
EECCCEEEEEEEEEECCCCCEEEEECCCEEECCCCHHHHHHHHHHCCCCCCHHHHHHCCH
DELEDGIDELGVLLYGHEKNAYWFGSRLSLEETRRIAPYQNATGLQVTSAVLAGMVWALE
HHHHHCHHHCCEEEEECCCCCEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEC
NPKAGIVEADEIDYKRCLEVQMPYLGPVEGHYTDWTPLDGRPGLFPEDIDTKDPWQFRNI
CCCCCCEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
LVR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]