Click here to switch to the map view.

The map label for this gene is ycbK [H]

Identifier: 209550870

GI number: 209550870

Start: 3380381

End: 3382174

Strand: Reverse

Name: ycbK [H]

Synonym: Rleg2_3294

Alternate gene names: 209550870

Gene position: 3382174-3380381 (Counterclockwise)

Preceding gene: 209550871

Following gene: 209550866

Centisome position: 74.53

GC content: 64.44

Gene sequence:

>1794_bases
ATGTTGTGCGCCGACATTTGCGGAAAGGCAGTAAGGACGGCAGCGGCCGCCCTTCTTGCGCTCGCGGTTTCCTCACCGGT
ATTCGTTAGTACACCTTCCGAGGCAGCGGGCGACACCCGCAGCCTCAAGCTCTATTTCATCCATACCGGCGAAAAAGCCG
TCATCACCTACAAGCGCAACGGCAAGTTCGACCCCAAGGGCCTGGAGCAGCTGAACCGCTTCCTGCGCGACTGGCGCAAG
AACCAGCCAACAAAGATGGACCCGCGCCTGTTCGACCTGATCTGGGAAGTTTATCGCCAGAGCGGTTCGCGGGATTATAT
CAACGTCGTCTGCGGTTTCCGTTCGCCGGGCACCAACGAGATGCTGCGCGGCCGCTCGCGCAACTCGGGCGTCGCCGAAA
AGAGCCAGCATATGCTCGGCAAGGCGATGGACTTTTTCATTCCGGACGTCAAGCTTGCGACCTTGCGTGGGATCGGCATG
AAGATGCAGGTCGGCGGCGTCGGCTTTTACCCGAAATCGGGCTCGCCCTTCGTGCATATGGATGTCGGCGGCGTCCGTGC
CTGGCCGCGCATGAGCCGCGACGAGCTGGTTCGGCTTTTCCCGAACGGCAATACCATTCATATCCCGGCTGACGGCAAGC
CGCTGCCCGGCTATCAGCAGGCGATGGCCGACTATAAGCGCCGCGTCAGCGGTACGCAGATCGAAATCGCCAGCGCTTCC
GAATCGGCGCCGAAGCATAAGACGCTGTTTGCTGCGCTGTTTGGCGGCGGAGCGGACGAGCAGGAAGACGATTCGGACGA
TTCGACGCCTGTTGCCGTCGCCAAGGCGACGCCGCCGAAGGCCGAGCCCGCGCCTGCCGAGCCGCAGCAGACCGAAGTTG
CCGATGTGAACGCACCGGTGCCGCAGGTTCGCCCGGCATTCAGCAACCAGCCGGCCGGCAGCGACGTGGCGAGTGCGCTC
GTCGCACCGCCTTCGGGTAATGCCGCGCAACAGGCCCTTGTCGCAGCGCTTCCGGCCGATCAGGCCCAGCCGCAGCAATT
CGCCGATCTCAGCGCCTACAGCATCCCGGTTCCCTCGCTTCTCGGCCAGCGCCGCGCGCCGGGCGATGCTGAGCTCGCAT
CGACCGATCCTGCGATGCTGAGCGGAATGCCGGTTCCGACGCCGGTCGAACGCCCTGCCGTTGCCGAGAACCTTCTGGCT
GCGGCCAATGCCGATCCGGAAGCCGAGGCCGACGAGGCGGATCAGGACGGCGGACTGTCTCCCGCCGTCGCCGATGCGCT
CGACCAGCAGAACAAGGGTGGGGAAAACCAGGTCGCCGCACATGCGCCTGAGATGACGGTGGAGCAGGCAATCAACGCTG
CGATGACGCAAAAGGCGCCCGCCGCAAAACCGCCGCTCGAACTCGCAGCCTTGGCGCCGATGACCAAATCGGCAAGCTTC
GGCGACGGCTTTGATGAGCCGGCCGCCGAAAACGCCGTGGCGCAGGGTCTGCCCACCAAGGGCGGCCGCCCGACGCACAA
GGAAGCCGCCGCGGCGGACGCCAGCCGCGCGACTGTTCGCACCGAGCCGAAGCTGACGCAGAAGATGATTTCGCAGTGGG
CGCTGACCAATGCCCGTCTGGAAATGGCCTCCAAGCAGGTGAAGGCGCCACGTTTCGTCAGCCAGACGATGCGCGCGCAG
CCGACCACCGTTTATACCGAAGGTTTCAACGTCAAGACCGCTTCGGTCGACCCGGCCCGCTTCAGCGGCACGGCTGTGAA
CTTCATGGAAGTGCGCAAGTTCAACACGAACTGA

Upstream 100 bases:

>100_bases
TTGACAGTCATCTGAGACAGTACGGGACATTGTCTGTCTGACGGGGATCGAGTTGCCGAATCTGAATGGGAATTCCAAGC
CTTCGCGCTTGAGCTGGCGT

Downstream 100 bases:

>100_bases
GCCGCCCGATATCCCGAACATCAAAACCGTCGGAGTGATCCGGCGGTTTTTCTTTTGGCTGCTTCGACCAGCGGCGGACA
GTCGTTATGGCTAATGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 597

Protein sequence:

>597_residues
MLCADICGKAVRTAAAALLALAVSSPVFVSTPSEAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRK
NQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRGIGM
KMQVGGVGFYPKSGSPFVHMDVGGVRAWPRMSRDELVRLFPNGNTIHIPADGKPLPGYQQAMADYKRRVSGTQIEIASAS
ESAPKHKTLFAALFGGGADEQEDDSDDSTPVAVAKATPPKAEPAPAEPQQTEVADVNAPVPQVRPAFSNQPAGSDVASAL
VAPPSGNAAQQALVAALPADQAQPQQFADLSAYSIPVPSLLGQRRAPGDAELASTDPAMLSGMPVPTPVERPAVAENLLA
AANADPEAEADEADQDGGLSPAVADALDQQNKGGENQVAAHAPEMTVEQAINAAMTQKAPAAKPPLELAALAPMTKSASF
GDGFDEPAAENAVAQGLPTKGGRPTHKEAAAADASRATVRTEPKLTQKMISQWALTNARLEMASKQVKAPRFVSQTMRAQ
PTTVYTEGFNVKTASVDPARFSGTAVNFMEVRKFNTN

Sequences:

>Translated_597_residues
MLCADICGKAVRTAAAALLALAVSSPVFVSTPSEAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRK
NQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRGIGM
KMQVGGVGFYPKSGSPFVHMDVGGVRAWPRMSRDELVRLFPNGNTIHIPADGKPLPGYQQAMADYKRRVSGTQIEIASAS
ESAPKHKTLFAALFGGGADEQEDDSDDSTPVAVAKATPPKAEPAPAEPQQTEVADVNAPVPQVRPAFSNQPAGSDVASAL
VAPPSGNAAQQALVAALPADQAQPQQFADLSAYSIPVPSLLGQRRAPGDAELASTDPAMLSGMPVPTPVERPAVAENLLA
AANADPEAEADEADQDGGLSPAVADALDQQNKGGENQVAAHAPEMTVEQAINAAMTQKAPAAKPPLELAALAPMTKSASF
GDGFDEPAAENAVAQGLPTKGGRPTHKEAAAADASRATVRTEPKLTQKMISQWALTNARLEMASKQVKAPRFVSQTMRAQ
PTTVYTEGFNVKTASVDPARFSGTAVNFMEVRKFNTN
>Mature_597_residues
MLCADICGKAVRTAAAALLALAVSSPVFVSTPSEAAGDTRSLKLYFIHTGEKAVITYKRNGKFDPKGLEQLNRFLRDWRK
NQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNEMLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRGIGM
KMQVGGVGFYPKSGSPFVHMDVGGVRAWPRMSRDELVRLFPNGNTIHIPADGKPLPGYQQAMADYKRRVSGTQIEIASAS
ESAPKHKTLFAALFGGGADEQEDDSDDSTPVAVAKATPPKAEPAPAEPQQTEVADVNAPVPQVRPAFSNQPAGSDVASAL
VAPPSGNAAQQALVAALPADQAQPQQFADLSAYSIPVPSLLGQRRAPGDAELASTDPAMLSGMPVPTPVERPAVAENLLA
AANADPEAEADEADQDGGLSPAVADALDQQNKGGENQVAAHAPEMTVEQAINAAMTQKAPAAKPPLELAALAPMTKSASF
GDGFDEPAAENAVAQGLPTKGGRPTHKEAAAADASRATVRTEPKLTQKMISQWALTNARLEMASKQVKAPRFVSQTMRAQ
PTTVYTEGFNVKTASVDPARFSGTAVNFMEVRKFNTN

Specific function: Unknown

COG id: COG3108

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1666 [H]

Homologues:

Organism=Escherichia coli, GI1787157, Length=182, Percent_Identity=38.4615384615385, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010275
- InterPro:   IPR009045
- InterPro:   IPR006311 [H]

Pfam domain/function: PF05951 Peptidase_M15_2 [H]

EC number: NA

Molecular weight: Translated: 63394; Mature: 63394

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCADICGKAVRTAAAALLALAVSSPVFVSTPSEAAGDTRSLKLYFIHTGEKAVITYKRN
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCEEEEEEEECCCEEEEEEECC
GKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNE
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
MLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKSGSPFVHM
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCEEEEECCEEECCCCCCCEEEE
DVGGVRAWPRMSRDELVRLFPNGNTIHIPADGKPLPGYQQAMADYKRRVSGTQIEIASAS
ECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
ESAPKHKTLFAALFGGGADEQEDDSDDSTPVAVAKATPPKAEPAPAEPQQTEVADVNAPV
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCC
PQVRPAFSNQPAGSDVASALVAPPSGNAAQQALVAALPADQAQPQQFADLSAYSIPVPSL
CCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHH
LGQRRAPGDAELASTDPAMLSGMPVPTPVERPAVAENLLAAANADPEAEADEADQDGGLS
HCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PAVADALDQQNKGGENQVAAHAPEMTVEQAINAAMTQKAPAAKPPLELAALAPMTKSASF
HHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
GDGFDEPAAENAVAQGLPTKGGRPTHKEAAAADASRATVRTEPKLTQKMISQWALTNARL
CCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHH
EMASKQVKAPRFVSQTMRAQPTTVYTEGFNVKTASVDPARFSGTAVNFMEVRKFNTN
HHHHHHHCCHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCEEEHEEEEECCCC
>Mature Secondary Structure
MLCADICGKAVRTAAAALLALAVSSPVFVSTPSEAAGDTRSLKLYFIHTGEKAVITYKRN
CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCEEEEEEEECCCEEEEEEECC
GKFDPKGLEQLNRFLRDWRKNQPTKMDPRLFDLIWEVYRQSGSRDYINVVCGFRSPGTNE
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
MLRGRSRNSGVAEKSQHMLGKAMDFFIPDVKLATLRGIGMKMQVGGVGFYPKSGSPFVHM
HHHCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHCCCEEEEECCEEECCCCCCCEEEE
DVGGVRAWPRMSRDELVRLFPNGNTIHIPADGKPLPGYQQAMADYKRRVSGTQIEIASAS
ECCCCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCC
ESAPKHKTLFAALFGGGADEQEDDSDDSTPVAVAKATPPKAEPAPAEPQQTEVADVNAPV
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCC
PQVRPAFSNQPAGSDVASALVAPPSGNAAQQALVAALPADQAQPQQFADLSAYSIPVPSL
CCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHH
LGQRRAPGDAELASTDPAMLSGMPVPTPVERPAVAENLLAAANADPEAEADEADQDGGLS
HCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PAVADALDQQNKGGENQVAAHAPEMTVEQAINAAMTQKAPAAKPPLELAALAPMTKSASF
HHHHHHHHHCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCC
GDGFDEPAAENAVAQGLPTKGGRPTHKEAAAADASRATVRTEPKLTQKMISQWALTNARL
CCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHH
EMASKQVKAPRFVSQTMRAQPTTVYTEGFNVKTASVDPARFSGTAVNFMEVRKFNTN
HHHHHHHCCHHHHHHHHHCCCCEEEECCCEEEECCCCCCCCCCCEEEHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]