| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209550862
Identifier: 209550862
GI number: 209550862
Start: 3374793
End: 3375197
Strand: Direct
Name: 209550862
Synonym: Rleg2_3286
Alternate gene names: NA
Gene position: 3374793-3375197 (Clockwise)
Preceding gene: 209550861
Following gene: 209550863
Centisome position: 74.37
GC content: 67.41
Gene sequence:
>405_bases ATGAGCGCTTCGAACCCGAAGGCCATGACGGTCAGCCGCCCCGGCCGGGCGGTGCGCTCGCCGGAGGGTGTCGCCACGGC GCCTTTCTGGGTCGAGATGTTGCTCGAAGGCAGCGCCGATGGCGAAACCACGGCCATGCGCGCCACGCTCGATCCCGGCA CCATCACCCGCTGGCATACGCATCCCAGGGGCCAGTTGCTCTATGTGCTTTCGGGGCATGGGCTGGCGCAGAGCGAGGGT GGTTCCGTCACGGAACTGCGCGCCGGCGACGCCGTCTGGTTTGCGGCCGGCGAGCGCCACTGGCATGGCGCGGCCGATGA CAGTCCCTTCGGCTATCTCAGCATTCAGGCAACGGAAAACGGCAGCATCGTCGAATGGCTGCAACCGGTGGAGGCACGGT CATGA
Upstream 100 bases:
>100_bases TCGTCATCAGCACCAGCGCCCCGGAAGACTGGTCCTTCGGCAACGGCATCGCCCAGATGACCGACCCCGACTGGCGGCTG CGGGTGGCAGGAGGCCAACG
Downstream 100 bases:
>100_bases TCGCCATGCAGTACAGCTTCACCCTGCCCGCCGATTTCGACATGTCGGTCATCGACCGGCGCATCCGCGACAAGGGACCG CTGCTCGACGGTTTTCCCAA
Product: cupin
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; Cupin 2 Conserved Barrel Domain-Containing Protein; Transcriptional Regulator; Cupin 2 Barrel; Cupin Region; Cupin Domain-Containing Protein; Cupin Family Protein; 4-Carboxymuconolactone Decarboxylase; Cupin Domain Protein; Carboxymuconolactone Decarboxylase Family Protein; Cupin 2 Barrel Domain-Containing Protein; Exported RmlC-Type Cupin; Conserved Protein; ABC-2 Type Transporter; Secreted Protein
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSASNPKAMTVSRPGRAVRSPEGVATAPFWVEMLLEGSADGETTAMRATLDPGTITRWHTHPRGQLLYVLSGHGLAQSEG GSVTELRAGDAVWFAAGERHWHGAADDSPFGYLSIQATENGSIVEWLQPVEARS
Sequences:
>Translated_134_residues MSASNPKAMTVSRPGRAVRSPEGVATAPFWVEMLLEGSADGETTAMRATLDPGTITRWHTHPRGQLLYVLSGHGLAQSEG GSVTELRAGDAVWFAAGERHWHGAADDSPFGYLSIQATENGSIVEWLQPVEARS >Mature_133_residues SASNPKAMTVSRPGRAVRSPEGVATAPFWVEMLLEGSADGETTAMRATLDPGTITRWHTHPRGQLLYVLSGHGLAQSEGG SVTELRAGDAVWFAAGERHWHGAADDSPFGYLSIQATENGSIVEWLQPVEARS
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14329; Mature: 14198
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASNPKAMTVSRPGRAVRSPEGVATAPFWVEMLLEGSADGETTAMRATLDPGTITRWHT CCCCCCCEEEEECCCCCCCCCCCCEECHHHEEEEECCCCCCCCEEEEEEECCCCEEEEEE HPRGQLLYVLSGHGLAQSEGGSVTELRAGDAVWFAAGERHWHGAADDSPFGYLSIQATEN CCCCCEEEEEECCCEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEECCC GSIVEWLQPVEARS CCEEEEECCCCCCC >Mature Secondary Structure SASNPKAMTVSRPGRAVRSPEGVATAPFWVEMLLEGSADGETTAMRATLDPGTITRWHT CCCCCCEEEEECCCCCCCCCCCCEECHHHEEEEECCCCCCCCEEEEEEECCCCEEEEEE HPRGQLLYVLSGHGLAQSEGGSVTELRAGDAVWFAAGERHWHGAADDSPFGYLSIQATEN CCCCCEEEEEECCCEECCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCEEEEEEECCC GSIVEWLQPVEARS CCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA