Click here to switch to the map view.

The map label for this gene is ymdB [H]

Identifier: 209550787

GI number: 209550787

Start: 3299214

End: 3300038

Strand: Direct

Name: ymdB [H]

Synonym: Rleg2_3211

Alternate gene names: 209550787

Gene position: 3299214-3300038 (Clockwise)

Preceding gene: 209550786

Following gene: 209550788

Centisome position: 72.7

GC content: 63.52

Gene sequence:

>825_bases
ATGCGGCTGCTTTTTCTGGGTGACATGGTCGGCAAGACGGGACGCACGGCGGTCTGGGACCGCCTTCCCGGCCTGATCTC
CGACCTCAAGCTCGATTTCGTCATCGTCAACGGCGAGAATGCCGCCGGCGGCTTCGGCATCACCGAGGACATCTTTCTGG
AAACGATCAATGCCGGCGCCGACGTGGTGACGACGGGCAATCACGTCTGGGACCAGAAGGAAGCCGTGGCTTTTGCCGGG
CGCCACGATCAATTCCTGCGGCCGGCCAACTATCCGCAAGGCACACCCGGCCGCGGCTCCGGCCTTTTCTATGCCAGGAA
CGGCGCACGCGTGCTCGTCGCCAATGTCATGGGCCGGGTCTTCATGCATCCGGAACTCGACGACCCGTTCAAATCGGCGG
AAGTGATCCTCGACGCCTGCCCGCTGAAGGAACAGGCCGATGCGATCATTTTCGATTTCCATGCGGAAGCCACCAGCGAG
AAGCAGTGCTTCGGCCATTTCGTCGACGGCCGCGCCAGTTTCGTCGTCGGCACCCACACGCATGTGCCGACGGCCGACGC
ACAGATTCTGAACGGCGGCACCGCCTATATGTCGGATGCCGGCATGTGCGGCGACTACGATTCCTCCCTCGGCATGGACA
AGGAAGAGCCGCTCAACCGCTTCATCTCCAAGATGCCAAAGGGCCGCATGGAAGCAGCCAGCGGCCCGGCGACGATCTGC
GGCGTCGGCGTCGAGATCTCCGATTCGACGGGACTGGCCGAAAAGATCGCGCCGCTCCGGCTCGGACCGCGGCTCGCTGA
GACAGTGCCGGAATTCTGGCGGTAG

Upstream 100 bases:

>100_bases
GGAAGTGGCACATGTGCCCGACGAGCCGCATGACATAAGCCTGGATGCCATCCTGACAGAAAGCGGCCTTCGCTTTTTTG
CCTCTTGGATTGGATAGGGA

Downstream 100 bases:

>100_bases
GCCACCGGCTTCAACACGCAAATGTGAGCATCCCCAGCCTGGACCGCTGCGACCTCATGCCGCATCCTCCCGCCGCCAAT
TGAAAGTGGCAGAGCGCCGG

Product: metallophosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRLLFLGDMVGKTGRTAVWDRLPGLISDLKLDFVIVNGENAAGGFGITEDIFLETINAGADVVTTGNHVWDQKEAVAFAG
RHDQFLRPANYPQGTPGRGSGLFYARNGARVLVANVMGRVFMHPELDDPFKSAEVILDACPLKEQADAIIFDFHAEATSE
KQCFGHFVDGRASFVVGTHTHVPTADAQILNGGTAYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRMEAASGPATIC
GVGVEISDSTGLAEKIAPLRLGPRLAETVPEFWR

Sequences:

>Translated_274_residues
MRLLFLGDMVGKTGRTAVWDRLPGLISDLKLDFVIVNGENAAGGFGITEDIFLETINAGADVVTTGNHVWDQKEAVAFAG
RHDQFLRPANYPQGTPGRGSGLFYARNGARVLVANVMGRVFMHPELDDPFKSAEVILDACPLKEQADAIIFDFHAEATSE
KQCFGHFVDGRASFVVGTHTHVPTADAQILNGGTAYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRMEAASGPATIC
GVGVEISDSTGLAEKIAPLRLGPRLAETVPEFWR
>Mature_274_residues
MRLLFLGDMVGKTGRTAVWDRLPGLISDLKLDFVIVNGENAAGGFGITEDIFLETINAGADVVTTGNHVWDQKEAVAFAG
RHDQFLRPANYPQGTPGRGSGLFYARNGARVLVANVMGRVFMHPELDDPFKSAEVILDACPLKEQADAIIFDFHAEATSE
KQCFGHFVDGRASFVVGTHTHVPTADAQILNGGTAYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRMEAASGPATIC
GVGVEISDSTGLAEKIAPLRLGPRLAETVPEFWR

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29507; Mature: 29507

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLFLGDMVGKTGRTAVWDRLPGLISDLKLDFVIVNGENAAGGFGITEDIFLETINAGA
CEEEEEEHHHCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
DVVTTGNHVWDQKEAVAFAGRHDQFLRPANYPQGTPGRGSGLFYARNGARVLVANVMGRV
CEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHH
FMHPELDDPFKSAEVILDACPLKEQADAIIFDFHAEATSEKQCFGHFVDGRASFVVGTHT
EECCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCC
HVPTADAQILNGGTAYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRMEAASGPATIC
CCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
GVGVEISDSTGLAEKIAPLRLGPRLAETVPEFWR
EECEEECCCCCHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MRLLFLGDMVGKTGRTAVWDRLPGLISDLKLDFVIVNGENAAGGFGITEDIFLETINAGA
CEEEEEEHHHCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC
DVVTTGNHVWDQKEAVAFAGRHDQFLRPANYPQGTPGRGSGLFYARNGARVLVANVMGRV
CEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEHHHHHH
FMHPELDDPFKSAEVILDACPLKEQADAIIFDFHAEATSEKQCFGHFVDGRASFVVGTHT
EECCCCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCC
HVPTADAQILNGGTAYMSDAGMCGDYDSSLGMDKEEPLNRFISKMPKGRMEAASGPATIC
CCCCCCCEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEE
GVGVEISDSTGLAEKIAPLRLGPRLAETVPEFWR
EECEEECCCCCHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]