| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is 209550778
Identifier: 209550778
GI number: 209550778
Start: 3291284
End: 3292429
Strand: Reverse
Name: 209550778
Synonym: Rleg2_3202
Alternate gene names: NA
Gene position: 3292429-3291284 (Counterclockwise)
Preceding gene: 209550779
Following gene: 209550777
Centisome position: 72.55
GC content: 58.73
Gene sequence:
>1146_bases ATGAAGACCAGCGTCGTCACATCTGCTGTTCTGCATTGCCTGGTGCTCACCTGGGCGATGGTGTCGCTTAGCGCGCCCGA ATCCTTCAAGGTGGAGGATTTCGAGGCGATGCCGGTCGATCTCGTGCCGGTGGAATCCATTACCCAGATGCAACAGGGCG ACAAGAAGGCTCCGAAGAAGGAGACTTCGGCACCTGTGCCGACGACACGCCCGCCGATCGCGCAGCCGGCCGAGAACGCC GGCGACAACAATGTCGACCTGAAGACGCCGCCGGTGCCGAACGCCAAGCCGAGCAATAGCGAGGCTGCCGCGGCGAATTC CAGCGAAAAGCCGCTGCCGAAGACCGATCCCAAGCCGAATGATGTCAAGGACATCGTCAAGGAGGAAACGGAAGTCGAGC AGCCGAAGGAGGTCGCTTCCATTCCGCCGCCGAAGCCCGTCGAAGTGACGCCGCCGAAGCCGGAGGAAAAACCGCCGGAA GAACAGGCCAAGCCTGAGGAACCGCCGAAGCCTGATGCCGAGGCACTGCCGGACAATGTGCCGACCCCAGTCGCCAAACC ACAGGTAAAGCCGCCGGAACCACAGAAGCCCGCCGAAAAGCCGCCGGAAAAGACCCCGGACCAGCCGAAGACCGCCGACA CACCAACCGACAAGAAGAAGGCGGACAAGAAGCAGGAAGTGGCGAAATCGGCTTCATCGATGAAGAGCGACTTCAATGCT GACGATATTTCGGCGTTGCTGAACAAGACCGATCCGTCCGCTGGGGGTGCCAAGCGCTCGACGCAGGAGGCATCGCTGGG TGCGAAGAAGAGCAATAACGGCTCGAAGCTCAGCCAAAGCGAAGAAGATGCGCTAAAGGGTTTGATCGAGGGTAACTGGC TTGTCACTCCCGGAATGGAAGGCGTTTCAGGCATGGTCATCAAAGTGCATTTCAAGCTCGACAAAGATGGAAATATTATC GGCCAGCCCGAGATCGAGTCTTCCGGCGGAAGCAGCACCGATTCAACGCGTCGCGCGCTGGAAAGTGGCGCTTACCGTGC CGTGATGAAATCTGCGTCGTCGTTCCGCACGACGCTTCCGATGGACAAGTATGACGTATGGAACGAGGTTGTCCTTAACT TTAATCCCAGCGATATGGGAATTTAA
Upstream 100 bases:
>100_bases CTTACGGCGTCATCGCCGACGTCATGGCCCGTATTCAGGGCGCAGGCTTCAAGAATATCGGCCTCGTGACGCAGCAGAAG AAGGACCAATAGCGTTCAAT
Downstream 100 bases:
>100_bases ATGTCGAGGAATCCATTCAATTTCGCGAAGTCTTTCGGACTATACATTGCGCTGACAGGGATCGTCGGCTGCTCCATCTT TCCATTCAACGCGGATGCTG
Product: outer membrane protein
Products: NA
Alternate protein names: LA TolA Protein; LA Protein; Outer Membrane Protein; LA Outer Membrane Protein
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKKETSAPVPTTRPPIAQPAENA GDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPKTDPKPNDVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPE EQAKPEEPPKPDAEALPDNVPTPVAKPQVKPPEPQKPAEKPPEKTPDQPKTADTPTDKKKADKKQEVAKSASSMKSDFNA DDISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLVTPGMEGVSGMVIKVHFKLDKDGNII GQPEIESSGGSSTDSTRRALESGAYRAVMKSASSFRTTLPMDKYDVWNEVVLNFNPSDMGI
Sequences:
>Translated_381_residues MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKKETSAPVPTTRPPIAQPAENA GDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPKTDPKPNDVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPE EQAKPEEPPKPDAEALPDNVPTPVAKPQVKPPEPQKPAEKPPEKTPDQPKTADTPTDKKKADKKQEVAKSASSMKSDFNA DDISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLVTPGMEGVSGMVIKVHFKLDKDGNII GQPEIESSGGSSTDSTRRALESGAYRAVMKSASSFRTTLPMDKYDVWNEVVLNFNPSDMGI >Mature_381_residues MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKKETSAPVPTTRPPIAQPAENA GDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPKTDPKPNDVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPE EQAKPEEPPKPDAEALPDNVPTPVAKPQVKPPEPQKPAEKPPEKTPDQPKTADTPTDKKKADKKQEVAKSASSMKSDFNA DDISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLVTPGMEGVSGMVIKVHFKLDKDGNII GQPEIESSGGSSTDSTRRALESGAYRAVMKSASSFRTTLPMDKYDVWNEVVLNFNPSDMGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40755; Mature: 40755
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCC ETSAPVPTTRPPIAQPAENAGDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPKTDPKPN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC DVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDNV HHHHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCC PTPVAKPQVKPPEPQKPAEKPPEKTPDQPKTADTPTDKKKADKKQEVAKSASSMKSDFNA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH DDISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLVTPGME HHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCC GVSGMVIKVHFKLDKDGNIIGQPEIESSGGSSTDSTRRALESGAYRAVMKSASSFRTTLP CCCCEEEEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC MDKYDVWNEVVLNFNPSDMGI CHHHHHHHHEEEECCCHHCCC >Mature Secondary Structure MKTSVVTSAVLHCLVLTWAMVSLSAPESFKVEDFEAMPVDLVPVESITQMQQGDKKAPKK CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCCCCC ETSAPVPTTRPPIAQPAENAGDNNVDLKTPPVPNAKPSNSEAAAANSSEKPLPKTDPKPN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC DVKDIVKEETEVEQPKEVASIPPPKPVEVTPPKPEEKPPEEQAKPEEPPKPDAEALPDNV HHHHHHHHHHHHHCCHHHHCCCCCCCEECCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCC PTPVAKPQVKPPEPQKPAEKPPEKTPDQPKTADTPTDKKKADKKQEVAKSASSMKSDFNA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH DDISALLNKTDPSAGGAKRSTQEASLGAKKSNNGSKLSQSEEDALKGLIEGNWLVTPGME HHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCC GVSGMVIKVHFKLDKDGNIIGQPEIESSGGSSTDSTRRALESGAYRAVMKSASSFRTTLP CCCCEEEEEEEEECCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC MDKYDVWNEVVLNFNPSDMGI CHHHHHHHHEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA