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The map label for this gene is exsH [H]

Identifier: 209550703

GI number: 209550703

Start: 3196876

End: 3197703

Strand: Reverse

Name: exsH [H]

Synonym: Rleg2_3127

Alternate gene names: 209550703

Gene position: 3197703-3196876 (Counterclockwise)

Preceding gene: 209550704

Following gene: 209550696

Centisome position: 70.47

GC content: 58.21

Gene sequence:

>828_bases
ATGCGTTACGGGATATCTGCCAAGTGGCTCGGTCTGCTCGTCGTTCTCGGTCTAGGCGCGCTGCCCGGCCAGCCCAGCGT
GGCCCAAGAACCGCTCAATATCGATGCATACCAGCTGACATTCGACGAGAGTTTCGACAGCCTCGACGTTTCGGCCTGGG
GAGAGAAGAGCTCCCGCTGGATCGCTCATACGCCCTGGAACGGCGATTTCGGTGATGCCCGTTTCACCGATCCGGCTCCC
GGCTTTCCGTTTACCACCGATCAGGGAATTCTGAAGATCGAAGCGCGCAAGGAGGCCGACGGCACCTGGCGTTCAGGCTT
GCTGTCCTCGGTGAACCCGAAGGGCGAAGGTTTCTCGCAGCAGTTCGGCTATTTCGAAGCACGGATGAAGCTGCCGCCGG
GCAAGGGTGTCTGGCCGGCCTTCTGGCTCATCGGGCTCGACCGGTCGAAATACACAGCCGAGATCGACGTGCTGGAATAT
TACGGCCGCGCGCCTTACGAATTCAGCATGGGTTTTCATATCTGGCGTCAGAGCCAAGGCGGGCAGAACTCGACCGGCGG
CTATTGGAAAACGGTCGAGGATGGGATTTTAAACAGCGAGTATCATACCTACGGCGTCGATATTCAGGCTGACAAGACGA
CCTTCTATCTGGATCGGCAATATCTTTGGAGCTTCGACACCCCGAAGGAGTTCCACATGCCGTTCTATCCGCTGGTCAAT
CTGGCGCTCGGCTCGGGATGGCCGATCGACGAAACGCCGAACCCTTCCATTCTGCTCGTCGACTATATCCATGTTTACAA
GCGAAAGCCCGCCGACGCGGCGAATTGA

Upstream 100 bases:

>100_bases
ATCGTCCAAAGGCTCATCCCGCGACGAAACGAGGTTCTCACCTCATGATCGGGGCAAATGCCCCCGACGATTTTGTTCAA
GCGTTTTCAAGGGAGTAACA

Downstream 100 bases:

>100_bases
ACGAGGAGCTTAGGTCGCCTGCCTATTGCTCGCCGAGGCAGCTGAGACCGGTTTCCAGGTCGAAGAGATGCATCGCCTCC
TCGTCGAAGAAGAGAGTCAG

Product: glycoside hydrolase family 16

Products: NA

Alternate protein names: Succinoglycan biosynthesis protein exsH [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MRYGISAKWLGLLVVLGLGALPGQPSVAQEPLNIDAYQLTFDESFDSLDVSAWGEKSSRWIAHTPWNGDFGDARFTDPAP
GFPFTTDQGILKIEARKEADGTWRSGLLSSVNPKGEGFSQQFGYFEARMKLPPGKGVWPAFWLIGLDRSKYTAEIDVLEY
YGRAPYEFSMGFHIWRQSQGGQNSTGGYWKTVEDGILNSEYHTYGVDIQADKTTFYLDRQYLWSFDTPKEFHMPFYPLVN
LALGSGWPIDETPNPSILLVDYIHVYKRKPADAAN

Sequences:

>Translated_275_residues
MRYGISAKWLGLLVVLGLGALPGQPSVAQEPLNIDAYQLTFDESFDSLDVSAWGEKSSRWIAHTPWNGDFGDARFTDPAP
GFPFTTDQGILKIEARKEADGTWRSGLLSSVNPKGEGFSQQFGYFEARMKLPPGKGVWPAFWLIGLDRSKYTAEIDVLEY
YGRAPYEFSMGFHIWRQSQGGQNSTGGYWKTVEDGILNSEYHTYGVDIQADKTTFYLDRQYLWSFDTPKEFHMPFYPLVN
LALGSGWPIDETPNPSILLVDYIHVYKRKPADAAN
>Mature_275_residues
MRYGISAKWLGLLVVLGLGALPGQPSVAQEPLNIDAYQLTFDESFDSLDVSAWGEKSSRWIAHTPWNGDFGDARFTDPAP
GFPFTTDQGILKIEARKEADGTWRSGLLSSVNPKGEGFSQQFGYFEARMKLPPGKGVWPAFWLIGLDRSKYTAEIDVLEY
YGRAPYEFSMGFHIWRQSQGGQNSTGGYWKTVEDGILNSEYHTYGVDIQADKTTFYLDRQYLWSFDTPKEFHMPFYPLVN
LALGSGWPIDETPNPSILLVDYIHVYKRKPADAAN

Specific function: Cleaves high molecular weight succinoglycan to yield LMW succinoglycan. Dynamically regulate the molecular weight distribution of succinoglycan by cleaving nascent succinoglycan only during a limited period after its synthesis, perhaps before it undergoes

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Secreted. Note=Probably by a type-III secretion system [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 hemolysin-type calcium-binding repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR013320
- InterPro:   IPR000757
- InterPro:   IPR011049 [H]

Pfam domain/function: PF00722 Glyco_hydro_16 [H]

EC number: NA

Molecular weight: Translated: 31020; Mature: 31020

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS01034 GLYCOSYL_HYDROL_F16

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYGISAKWLGLLVVLGLGALPGQPSVAQEPLNIDAYQLTFDESFDSLDVSAWGEKSSRW
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCE
IAHTPWNGDFGDARFTDPAPGFPFTTDQGILKIEARKEADGTWRSGLLSSVNPKGEGFSQ
EEECCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCHH
QFGYFEARMKLPPGKGVWPAFWLIGLDRSKYTAEIDVLEYYGRAPYEFSMGFHIWRQSQG
HCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEHHHHCCCCCEEEECCEEEEECCCC
GQNSTGGYWKTVEDGILNSEYHTYGVDIQADKTTFYLDRQYLWSFDTPKEFHMPFYPLVN
CCCCCCCEEEEHHCCCCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHCCCHHHHHH
LALGSGWPIDETPNPSILLVDYIHVYKRKPADAAN
HHHCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCC
>Mature Secondary Structure
MRYGISAKWLGLLVVLGLGALPGQPSVAQEPLNIDAYQLTFDESFDSLDVSAWGEKSSRW
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCE
IAHTPWNGDFGDARFTDPAPGFPFTTDQGILKIEARKEADGTWRSGLLSSVNPKGEGFSQ
EEECCCCCCCCCCEECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCHH
QFGYFEARMKLPPGKGVWPAFWLIGLDRSKYTAEIDVLEYYGRAPYEFSMGFHIWRQSQG
HCCEEEEEEECCCCCCCCCEEEEEECCCCCEEEEEEHHHHCCCCCEEEECCEEEEECCCC
GQNSTGGYWKTVEDGILNSEYHTYGVDIQADKTTFYLDRQYLWSFDTPKEFHMPFYPLVN
CCCCCCCEEEEHHCCCCCCCCEEEEEEEEECCEEEEEEEEEEECCCCCHHHCCCHHHHHH
LALGSGWPIDETPNPSILLVDYIHVYKRKPADAAN
HHHCCCCCCCCCCCCCEEEEEEHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11902715; 11481431; 9560202 [H]