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The map label for this gene is ureD [H]

Identifier: 209550633

GI number: 209550633

Start: 3115870

End: 3116691

Strand: Reverse

Name: ureD [H]

Synonym: Rleg2_3057

Alternate gene names: 209550633

Gene position: 3116691-3115870 (Counterclockwise)

Preceding gene: 209550634

Following gene: 209550632

Centisome position: 68.68

GC content: 65.82

Gene sequence:

>822_bases
ATGATGATTGCGGCGGCAGGCACGCGACCGCAAAGAGCGGAAGGACGCGGGCATCTGGCGGCAAAGCTGCTCGACGGCCG
CACGCGTCTGCGCGAGCTCTACCAGGAGGGCGCGGCGAAGATCCGCCTGCCGGATACATTCGATGCCTCGATGGAAGCCG
TCATCATCAACACTGCAGGCGGGCTGACCGGCGGCGACCGGATGGACTGGAGCGTTGAGGCCGGAGCGGGCACGCGCATC
GACGTCACCACCCAGGCCTGCGAGAAGATCTATAAGGCCTCGGCCGGCACGGCCGAGGTGAGGACCAGCATCAAGGTCGG
AACCCAAGCCCGCGTCGACTGGCTGCCGCAGGAAACGATCCTGTTCGATCGTTCCGCACTTTTTCGCCGCCTGGATGTCG
ATCTCGACGAGAGCGCCGAATTTCTGGCCGTCGAAGCCATACTGCTTGGCCGCAAGGCGATGGGCGAGACGGTGATGACC
GGGCTTTTCCGCGACCGCTGGCGCATCCGCCGCTCGGGTCGGCTGATCCATGCCGAAGAGCTGAGGCTGTCCGAAGGGGT
GGCGGCGTTGGCAGCGCGTCAGGCGGTGCTCGGCGGGCAGGTGGCTTTTGCGACGCTGCTCTATGCCGGGCCGCTTGCGG
AAGCCTATCTCGGAAAGGTGCGGCCGCTCGTCGAAGGCGCGATGGGGGGGGCGAGCGCCTGGGACGGCAAGCTCGTCGTC
CGCCTTGCGGCAGCCGACGGCTTTTCGCTGAGAAAAATCCTGATCCGGGTCATTTCCGCCTTGCGCAATGGTGCGCCCGT
GCCGAAAGTCTGGAATCTATGA

Upstream 100 bases:

>100_bases
TGCGGGTTCCGTTGCGGGTATCCTTGGACGGCACGGGAATTGCTTGCTTTCCGTCACCCGCGCGATCGAACGAACCGGTG
GCGCGATCGAAAGGGACGTT

Downstream 100 bases:

>100_bases
GCTCAATAAGCAGGTAGAAGATGAACCTCACTCCGAGAGAAAAAGACAAGCTGCTGATATCCATGGCGGCGATGGTGGCC
CGGCGACGGCTGGAGCGCGG

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MMIAAAGTRPQRAEGRGHLAAKLLDGRTRLRELYQEGAAKIRLPDTFDASMEAVIINTAGGLTGGDRMDWSVEAGAGTRI
DVTTQACEKIYKASAGTAEVRTSIKVGTQARVDWLPQETILFDRSALFRRLDVDLDESAEFLAVEAILLGRKAMGETVMT
GLFRDRWRIRRSGRLIHAEELRLSEGVAALAARQAVLGGQVAFATLLYAGPLAEAYLGKVRPLVEGAMGGASAWDGKLVV
RLAAADGFSLRKILIRVISALRNGAPVPKVWNL

Sequences:

>Translated_273_residues
MMIAAAGTRPQRAEGRGHLAAKLLDGRTRLRELYQEGAAKIRLPDTFDASMEAVIINTAGGLTGGDRMDWSVEAGAGTRI
DVTTQACEKIYKASAGTAEVRTSIKVGTQARVDWLPQETILFDRSALFRRLDVDLDESAEFLAVEAILLGRKAMGETVMT
GLFRDRWRIRRSGRLIHAEELRLSEGVAALAARQAVLGGQVAFATLLYAGPLAEAYLGKVRPLVEGAMGGASAWDGKLVV
RLAAADGFSLRKILIRVISALRNGAPVPKVWNL
>Mature_273_residues
MMIAAAGTRPQRAEGRGHLAAKLLDGRTRLRELYQEGAAKIRLPDTFDASMEAVIINTAGGLTGGDRMDWSVEAGAGTRI
DVTTQACEKIYKASAGTAEVRTSIKVGTQARVDWLPQETILFDRSALFRRLDVDLDESAEFLAVEAILLGRKAMGETVMT
GLFRDRWRIRRSGRLIHAEELRLSEGVAALAARQAVLGGQVAFATLLYAGPLAEAYLGKVRPLVEGAMGGASAWDGKLVV
RLAAADGFSLRKILIRVISALRNGAPVPKVWNL

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 29454; Mature: 29454

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIAAAGTRPQRAEGRGHLAAKLLDGRTRLRELYQEGAAKIRLPDTFDASMEAVIINTAG
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCC
GLTGGDRMDWSVEAGAGTRIDVTTQACEKIYKASAGTAEVRTSIKVGTQARVDWLPQETI
CCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHEEECCCHHCCCCCCHHH
LFDRSALFRRLDVDLDESAEFLAVEAILLGRKAMGETVMTGLFRDRWRIRRSGRLIHAEE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
LRLSEGVAALAARQAVLGGQVAFATLLYAGPLAEAYLGKVRPLVEGAMGGASAWDGKLVV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
RLAAADGFSLRKILIRVISALRNGAPVPKVWNL
EEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MMIAAAGTRPQRAEGRGHLAAKLLDGRTRLRELYQEGAAKIRLPDTFDASMEAVIINTAG
CEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCC
GLTGGDRMDWSVEAGAGTRIDVTTQACEKIYKASAGTAEVRTSIKVGTQARVDWLPQETI
CCCCCCCCCEEEECCCCCEEEEHHHHHHHHHHCCCCCHHHHHHEEECCCHHCCCCCCHHH
LFDRSALFRRLDVDLDESAEFLAVEAILLGRKAMGETVMTGLFRDRWRIRRSGRLIHAEE
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHH
LRLSEGVAALAARQAVLGGQVAFATLLYAGPLAEAYLGKVRPLVEGAMGGASAWDGKLVV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
RLAAADGFSLRKILIRVISALRNGAPVPKVWNL
EEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA