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The map label for this gene is rbsC [C]

Identifier: 209550519

GI number: 209550519

Start: 2998861

End: 2999859

Strand: Reverse

Name: rbsC [C]

Synonym: Rleg2_2942

Alternate gene names: 209550519

Gene position: 2999859-2998861 (Counterclockwise)

Preceding gene: 209550520

Following gene: 209550518

Centisome position: 66.11

GC content: 63.36

Gene sequence:

>999_bases
ATGGCAGTGACACTGGACCAGACGATTGCACAGAAGCAGCGCAGCCGGCTTGCGGAGTTTGTCGGCGGTCAGACATTCTG
GGTGCTGATCGCCGTGCTTCTCGCCTGCCTCTTCCTGTCCTTCGCCACCGATTCCTTCGCGACGTCGAAGAACCTCTACA
ACATCACCCGCAACGTCACCTTCGTCGCCATCATCGCGCTGGGCATGACGCTTGTCATCATCACCGGCGGCATCGATCTC
TCGGTGGGCTCGGTGCTCTGCCTCTGCAGCATGGTGCTGGCGGTCACCATGAACGCCGGTTATTCCATCGAGGTCGGCAT
AACGGCCGCGATCGTCACGGCGCTGGTGATCGGCGCCTTCAACGGCGTGCTGATCGCCTATCTCAATTTTCCGCCCTTCG
TGGTGACGCTCGGCATGCTGTCGATTGCGCGCAGCTTGGCGATGGTCGCCTCGAACAACACGGTTGTTTTCCAGTTTGGC
CCCGACCATGACAAGCTGCTGGCGCTCGGCGGCGGCGCCTGGTTTTTCGGCATCGCCAACCCCGTTCTCTACATGGTCAT
CCTGGCGCTCATCACCGGCTTCGTGCTGCGCTGGACGCGCTTCGGCCGCTATATCTTCGCGATCGGCGGCAATGAACATG
CCGCGACGCTGACCGGCGTTCCCGTGCGCAGCATCAAGGTTGCCGTCTATATGATCTCGGCGCTCTCGGCCGGCATTGCC
GGCATCGTTCAGACCGGCTGGCTTGGCGCCGTCACCACCAATATCGGCGCCGGCATGGAACTGCAGGTCATCGCCGCCGC
CGTCATCGGCGGCGCCAACCTCGCCGGCGGCATCGGCACCGCCTTCGGCGCCCTGGTCGGCGCGGCGCTGATCGAAGTGA
TCCGCAACAGCCTCGGGCTGCTCGGCATCAATGCCTTCTGGCAGGGAACGTTTATCGGCGGGGCGATCGTGCTGGCGGTG
CTGTTCGACCGGATCAGGAATTTGCGGCAGAGCGAGTAG

Upstream 100 bases:

>100_bases
CGGGTCTTATAACGGGCGCCATCGAGCAGGTCTGAGCGGTATTTCTCCCGCGGGAGACATACCGCTGAGAACAATGCCCC
ATCTGAAGTGAGAGGTCGAA

Downstream 100 bases:

>100_bases
GGGTGGAGGAATCCGCGGCGCACCCGGCGGGTGTGATCCGAACTTACCGAGACATGGACCCCTCTGCCTGGGCCCGATGA
GTCCCGTGAAGACAGCGATA

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MAVTLDQTIAQKQRSRLAEFVGGQTFWVLIAVLLACLFLSFATDSFATSKNLYNITRNVTFVAIIALGMTLVIITGGIDL
SVGSVLCLCSMVLAVTMNAGYSIEVGITAAIVTALVIGAFNGVLIAYLNFPPFVVTLGMLSIARSLAMVASNNTVVFQFG
PDHDKLLALGGGAWFFGIANPVLYMVILALITGFVLRWTRFGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIA
GIVQTGWLGAVTTNIGAGMELQVIAAAVIGGANLAGGIGTAFGALVGAALIEVIRNSLGLLGINAFWQGTFIGGAIVLAV
LFDRIRNLRQSE

Sequences:

>Translated_332_residues
MAVTLDQTIAQKQRSRLAEFVGGQTFWVLIAVLLACLFLSFATDSFATSKNLYNITRNVTFVAIIALGMTLVIITGGIDL
SVGSVLCLCSMVLAVTMNAGYSIEVGITAAIVTALVIGAFNGVLIAYLNFPPFVVTLGMLSIARSLAMVASNNTVVFQFG
PDHDKLLALGGGAWFFGIANPVLYMVILALITGFVLRWTRFGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIA
GIVQTGWLGAVTTNIGAGMELQVIAAAVIGGANLAGGIGTAFGALVGAALIEVIRNSLGLLGINAFWQGTFIGGAIVLAV
LFDRIRNLRQSE
>Mature_331_residues
AVTLDQTIAQKQRSRLAEFVGGQTFWVLIAVLLACLFLSFATDSFATSKNLYNITRNVTFVAIIALGMTLVIITGGIDLS
VGSVLCLCSMVLAVTMNAGYSIEVGITAAIVTALVIGAFNGVLIAYLNFPPFVVTLGMLSIARSLAMVASNNTVVFQFGP
DHDKLLALGGGAWFFGIANPVLYMVILALITGFVLRWTRFGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIAG
IVQTGWLGAVTTNIGAGMELQVIAAAVIGGANLAGGIGTAFGALVGAALIEVIRNSLGLLGINAFWQGTFIGGAIVLAVL
FDRIRNLRQSE

Specific function: Probably part of the binding-protein-dependent transport system y4mIJK. This system probably transports a sugar. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=299, Percent_Identity=38.7959866220736, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788896, Length=328, Percent_Identity=35.0609756097561, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1790524, Length=317, Percent_Identity=33.7539432176656, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI145693152, Length=298, Percent_Identity=34.2281879194631, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI87082395, Length=275, Percent_Identity=36.3636363636364, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI1787793, Length=299, Percent_Identity=33.4448160535117, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI145693214, Length=240, Percent_Identity=37.0833333333333, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788471, Length=347, Percent_Identity=32.5648414985591, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1789992, Length=132, Percent_Identity=41.6666666666667, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787794, Length=286, Percent_Identity=26.5734265734266, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34641; Mature: 34509

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTLDQTIAQKQRSRLAEFVGGQTFWVLIAVLLACLFLSFATDSFATSKNLYNITRNVT
CEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH
FVAIIALGMTLVIITGGIDLSVGSVLCLCSMVLAVTMNAGYSIEVGITAAIVTALVIGAF
HHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
NGVLIAYLNFPPFVVTLGMLSIARSLAMVASNNTVVFQFGPDHDKLLALGGGAWFFGIAN
CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHH
PVLYMVILALITGFVLRWTRFGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIA
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
GIVQTGWLGAVTTNIGAGMELQVIAAAVIGGANLAGGIGTAFGALVGAALIEVIRNSLGL
HHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
LGINAFWQGTFIGGAIVLAVLFDRIRNLRQSE
EEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AVTLDQTIAQKQRSRLAEFVGGQTFWVLIAVLLACLFLSFATDSFATSKNLYNITRNVT
EEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHH
FVAIIALGMTLVIITGGIDLSVGSVLCLCSMVLAVTMNAGYSIEVGITAAIVTALVIGAF
HHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHH
NGVLIAYLNFPPFVVTLGMLSIARSLAMVASNNTVVFQFGPDHDKLLALGGGAWFFGIAN
CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCHHHHHHH
PVLYMVILALITGFVLRWTRFGRYIFAIGGNEHAATLTGVPVRSIKVAVYMISALSAGIA
HHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
GIVQTGWLGAVTTNIGAGMELQVIAAAVIGGANLAGGIGTAFGALVGAALIEVIRNSLGL
HHHHHCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCE
LGINAFWQGTFIGGAIVLAVLFDRIRNLRQSE
EEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]