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The map label for this gene is napF [C]

Identifier: 209550517

GI number: 209550517

Start: 2998041

End: 2998355

Strand: Reverse

Name: napF [C]

Synonym: Rleg2_2940

Alternate gene names: 209550517

Gene position: 2998355-2998041 (Counterclockwise)

Preceding gene: 209550518

Following gene: 209550516

Centisome position: 66.07

GC content: 65.08

Gene sequence:

>315_bases
ATGCAGACAAAAGCGCTGTCTCGCCGACAACTGCTCCTCGGGCATCCCGACCCGGCATCCGAGCCGGACGCTTCAACATC
CTTGCCTCACACGGCCATGGTGACGGAAGCCTGCCTGTCCAGGCGGGGCGTTGCTTGCCGGTCGTGCGACGAAAGCTGTC
CCGAGAATGCAATCCGATTCCGGCCGCGGATCGGCGGGCCGTTTCTCCCGGAGATCGACGAGACGCTCTGCACCGGATGC
GACGCCTGCCTTGCGATCTGTCCGGTCGGCGCAATCGCGACCCGGATAAACGGACTGGAGGGCCGCAATGCCTGA

Upstream 100 bases:

>100_bases
CGGTGATTGCCGTCGGTGTCGTCGGCAGCTACGGCTTCGCCGTCTGGATGTGGCAAATCGTCTTCGGACCTCCCGGTCCT
CCCGGTCATTGAGGCGCGCC

Downstream 100 bases:

>100_bases
AACGCCATCGCTCTATCACATATCGAGCGCGGTCATCGCGACGCTGCCCACTGCGACGCTTGGCGTTCTCAGCCAACTGG
CGATGATGGAAAACGTTGAA

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: Periplasmic Nitrate Reductase Maturation Protein NapF; NapF Ferredoxin Component Of Periplasmic Nitrate Reductase; NapF Protein; Ferredoxin-Type Protein; Periplasmic Nitrate Reductase Ferredoxin-Like Protein; Ferredoxin Protein NapF

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MQTKALSRRQLLLGHPDPASEPDASTSLPHTAMVTEACLSRRGVACRSCDESCPENAIRFRPRIGGPFLPEIDETLCTGC
DACLAICPVGAIATRINGLEGRNA

Sequences:

>Translated_104_residues
MQTKALSRRQLLLGHPDPASEPDASTSLPHTAMVTEACLSRRGVACRSCDESCPENAIRFRPRIGGPFLPEIDETLCTGC
DACLAICPVGAIATRINGLEGRNA
>Mature_104_residues
MQTKALSRRQLLLGHPDPASEPDASTSLPHTAMVTEACLSRRGVACRSCDESCPENAIRFRPRIGGPFLPEIDETLCTGC
DACLAICPVGAIATRINGLEGRNA

Specific function: Involved In Electron Transfer. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788536, Length=77, Percent_Identity=38.961038961039, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11051; Mature: 11051

Theoretical pI: Translated: 6.47; Mature: 6.47

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
7.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTKALSRRQLLLGHPDPASEPDASTSLPHTAMVTEACLSRRGVACRSCDESCPENAIRF
CCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEC
RPRIGGPFLPEIDETLCTGCDACLAICPVGAIATRINGLEGRNA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQTKALSRRQLLLGHPDPASEPDASTSLPHTAMVTEACLSRRGVACRSCDESCPENAIRF
CCCCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEC
RPRIGGPFLPEIDETLCTGCDACLAICPVGAIATRINGLEGRNA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA