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The map label for this gene is napC [H]

Identifier: 209550513

GI number: 209550513

Start: 2994109

End: 2994813

Strand: Reverse

Name: napC [H]

Synonym: Rleg2_2936

Alternate gene names: 209550513

Gene position: 2994813-2994109 (Counterclockwise)

Preceding gene: 209550514

Following gene: 209550511

Centisome position: 65.99

GC content: 59.29

Gene sequence:

>705_bases
ATGACGATGATCGCTTGGGTGAAACACCTCATTCTCTGGGCATGGTCAGTCCTGACGACGCCGGCCGCGACGATCGGATT
GGGCGTGCTCACGCTCGGCGGCTTTATTGGCGGCGTCATGTTCTGGGGTGCGTTCAACACCGCCCTGGAGCTGACCAACA
CGGAGAATTTCTGCGTGTCGTGCCACGAGATGCACGACAATCCCTATGAGGAGCTGACCCGGACGATCCATTTCTCCAAC
CGCTCGGGCGTGCGCGCCACGTGTCCGAATTGTCATGTTCCTCATGACTGGACGGACAAGATTGCCCGCAAGATGCAGGC
TTCGAAGGAAGTGTGGGGCAAGATCTTCGGCACCATCGACACCCGGCCGGAGTTTCTCGAGCACCGTCTCGGCCTGGCGC
AGAACGAGTGGGCCCGGATGAAGGCCAATGACAGCCTCGAATGCCGCAATTGCCATTCGGCAGTGGCAATGGACCTGCAG
AAACAGACGCCGAGAGCCGCGGCGATCCACACGCAATATCTGCTTCCGGGCAAGGCGACCTGCATCGATTGCCATAAGGG
CATTGCGCATGAGCTGCCCAACATGCAGGGAATTGATCCCGGCTGGAAGATGCCGAAGGAGCTTGAAGGCACGCAGACGT
CGATCGGCAACCCGATCGACGATCTCAGTCGCGCTATGGCCGAAATCCATACGCAACAGTTCTGA

Upstream 100 bases:

>100_bases
GCACGGCCTGCCACGTTCCCCAGGCTGACATCAAACCGTTGGTGCCAAGCATGTTCAAGGATATGAGCGAACTTGGTTTC
AAGCCTGCCGGAAGCGAGTG

Downstream 100 bases:

>100_bases
GGAAGCTTCTGTAGGCGGCGCTGGCGCGCTGCCCCATGCCCTCAGAAGTGCCCGTCCTCATAGCCATCCAACTCAGGGCA
TCCCCTGATGTTGCCGAAGC

Product: NapC/NirT cytochrome C domain-containing protein

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTMIAWVKHLILWAWSVLTTPAATIGLGVLTLGGFIGGVMFWGAFNTALELTNTENFCVSCHEMHDNPYEELTRTIHFSN
RSGVRATCPNCHVPHDWTDKIARKMQASKEVWGKIFGTIDTRPEFLEHRLGLAQNEWARMKANDSLECRNCHSAVAMDLQ
KQTPRAAAIHTQYLLPGKATCIDCHKGIAHELPNMQGIDPGWKMPKELEGTQTSIGNPIDDLSRAMAEIHTQQF

Sequences:

>Translated_234_residues
MTMIAWVKHLILWAWSVLTTPAATIGLGVLTLGGFIGGVMFWGAFNTALELTNTENFCVSCHEMHDNPYEELTRTIHFSN
RSGVRATCPNCHVPHDWTDKIARKMQASKEVWGKIFGTIDTRPEFLEHRLGLAQNEWARMKANDSLECRNCHSAVAMDLQ
KQTPRAAAIHTQYLLPGKATCIDCHKGIAHELPNMQGIDPGWKMPKELEGTQTSIGNPIDDLSRAMAEIHTQQF
>Mature_233_residues
TMIAWVKHLILWAWSVLTTPAATIGLGVLTLGGFIGGVMFWGAFNTALELTNTENFCVSCHEMHDNPYEELTRTIHFSNR
SGVRATCPNCHVPHDWTDKIARKMQASKEVWGKIFGTIDTRPEFLEHRLGLAQNEWARMKANDSLECRNCHSAVAMDLQK
QTPRAAAIHTQYLLPGKATCIDCHKGIAHELPNMQGIDPGWKMPKELEGTQTSIGNPIDDLSRAMAEIHTQQF

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=191, Percent_Identity=56.020942408377, Blast_Score=232, Evalue=1e-62,
Organism=Escherichia coli, GI1787230, Length=182, Percent_Identity=41.7582417582418, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1788181, Length=152, Percent_Identity=42.1052631578947, Blast_Score=131, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 26209; Mature: 26078

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00359 RIBOSOMAL_L11 ; PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMIAWVKHLILWAWSVLTTPAATIGLGVLTLGGFIGGVMFWGAFNTALELTNTENFCVS
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
CHEMHDNPYEELTRTIHFSNRSGVRATCPNCHVPHDWTDKIARKMQASKEVWGKIFGTID
HHHHCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TRPEFLEHRLGLAQNEWARMKANDSLECRNCHSAVAMDLQKQTPRAAAIHTQYLLPGKAT
CCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCH
CIDCHKGIAHELPNMQGIDPGWKMPKELEGTQTSIGNPIDDLSRAMAEIHTQQF
HHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMIAWVKHLILWAWSVLTTPAATIGLGVLTLGGFIGGVMFWGAFNTALELTNTENFCVS
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHH
CHEMHDNPYEELTRTIHFSNRSGVRATCPNCHVPHDWTDKIARKMQASKEVWGKIFGTID
HHHHCCCHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
TRPEFLEHRLGLAQNEWARMKANDSLECRNCHSAVAMDLQKQTPRAAAIHTQYLLPGKAT
CCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCH
CIDCHKGIAHELPNMQGIDPGWKMPKELEGTQTSIGNPIDDLSRAMAEIHTQQF
HHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7639719 [H]