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The map label for this gene is 209550477

Identifier: 209550477

GI number: 209550477

Start: 2953140

End: 2954285

Strand: Reverse

Name: 209550477

Synonym: Rleg2_2900

Alternate gene names: NA

Gene position: 2954285-2953140 (Counterclockwise)

Preceding gene: 209550482

Following gene: 209550476

Centisome position: 65.1

GC content: 63.61

Gene sequence:

>1146_bases
GTGCGGCATGACAATAGCGTCTTTCATGATGTGCTGAAGCGGATTCCGTGGGCGGTCTTCGAAAGACTTGTGGATGAGCA
TCAGGCCGACAAGCATGTTCGGCGGCTGTCGACGAAGAGCCAGTTGATCGCCCTGCTTTACGGCCAGCTTGCCGGTGCCG
TCAGCCTGCGTGAGATCGTCGGCTCCCTGGAAAGCCATAGCGCCCGCCTTTACCATCTCGGCGCTCGTCCGGTGTCGCGC
TCGACGTTCGCCGATGCTAACGGCCTGCGTCCGAGCACGGTTTTTGCCGAGTTGTTCGCGCAGATGGTGGCCCGCGCCGG
GCGCGGCCTCAAGCGGGCCATCGGCGAGGCGGTCTATCTGATCGACGGCAGCAGTCTGAGCCTTGCCGGGGCGGGATCGC
AGTGGGCCCGCTTTTCCGATCAGGCCTGTGGTGCCAAGATGCACGTCGTCTACGATGCCAATGCCGAGCGACCGATCTAT
GCGGCCGTCACCCCGGCCAATGTCAACGACATCACCGCCGCCAAGGAGATGCCGATCGAGGCGGGCGCCACCTATGTCTT
CGATCTCGGCTATTACGACTTCGGCTGGTGGGCGAAGCTCAATGCCGCCGGCTGCCGCATCGTCAGCCGCCTCAAATCCC
ACACGAAACTGACGGTGAGCGCCGAGCAGGCGGCAAATGCGGATGCCGGCATCCTGTTCGACCGCATCGGCCTGTTGCCG
CAGCGCCAGGCCAAGAGCCGCCGCAACCCGATGAATCGGCCGGTGCGCGAGATCGGCGTGCGGATCGAAACCGGCAAGGT
GCTGCGCATCTTCTCCAACGATCTTACCGCCCCGGCCGAGGAGATCGCCGCGCTTTACAAGCGCCGCTGGGCGATCGAGC
TGTTCTTCCGCTGGGTCAAACAGACGCTGAAGATCCGCCATTTCCTCGGCAATAGCGAAAATGCCGTGCGCATCCAGGTC
GCTGTCGCCCTGATCGCCTATTTGCTGCTGCAGATGGCAAAGGCTGACCAGGCCACCGTCACGAGCCCGCTGGCCTTCGC
CCGCCTGGTGCGCACCAACCTGATGCACCGCAAAAGGATCGACCGCCTCCTAAAACCACGCCACAGCCCTCCCGGAAATC
CCGGCCAGATGAGCCTCCAATGGTGA

Upstream 100 bases:

>100_bases
TGCTGTCCGGTTTAAATTTAGTGGACATGGTGCACGGTGTTGATTCTACTCGTATTCGAGCGTTTCGCGACGATCTCGGA
CACGAAAGAGGAGCAACACC

Downstream 100 bases:

>100_bases
CAAAAATTAAACCGGACAGCAGTGGCCTTGAGCCGAGCATCCACACTGCATCCACCGGCGTCGTGGGATGGATCCTCGGC
TCAAGGCCGAGGATGACGGA

Product: transposase IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRHDNSVFHDVLKRIPWAVFERLVDEHQADKHVRRLSTKSQLIALLYGQLAGAVSLREIVGSLESHSARLYHLGARPVSR
STFADANGLRPSTVFAELFAQMVARAGRGLKRAIGEAVYLIDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIY
AAVTPANVNDITAAKEMPIEAGATYVFDLGYYDFGWWAKLNAAGCRIVSRLKSHTKLTVSAEQAANADAGILFDRIGLLP
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVKQTLKIRHFLGNSENAVRIQV
AVALIAYLLLQMAKADQATVTSPLAFARLVRTNLMHRKRIDRLLKPRHSPPGNPGQMSLQW

Sequences:

>Translated_381_residues
MRHDNSVFHDVLKRIPWAVFERLVDEHQADKHVRRLSTKSQLIALLYGQLAGAVSLREIVGSLESHSARLYHLGARPVSR
STFADANGLRPSTVFAELFAQMVARAGRGLKRAIGEAVYLIDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIY
AAVTPANVNDITAAKEMPIEAGATYVFDLGYYDFGWWAKLNAAGCRIVSRLKSHTKLTVSAEQAANADAGILFDRIGLLP
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVKQTLKIRHFLGNSENAVRIQV
AVALIAYLLLQMAKADQATVTSPLAFARLVRTNLMHRKRIDRLLKPRHSPPGNPGQMSLQW
>Mature_381_residues
MRHDNSVFHDVLKRIPWAVFERLVDEHQADKHVRRLSTKSQLIALLYGQLAGAVSLREIVGSLESHSARLYHLGARPVSR
STFADANGLRPSTVFAELFAQMVARAGRGLKRAIGEAVYLIDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIY
AAVTPANVNDITAAKEMPIEAGATYVFDLGYYDFGWWAKLNAAGCRIVSRLKSHTKLTVSAEQAANADAGILFDRIGLLP
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVKQTLKIRHFLGNSENAVRIQV
AVALIAYLLLQMAKADQATVTSPLAFARLVRTNLMHRKRIDRLLKPRHSPPGNPGQMSLQW

Specific function: Unknown

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559
- InterPro:   IPR014736 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 42444; Mature: 42444

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHDNSVFHDVLKRIPWAVFERLVDEHQADKHVRRLSTKSQLIALLYGQLAGAVSLREIV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLESHSARLYHLGARPVSRSTFADANGLRPSTVFAELFAQMVARAGRGLKRAIGEAVYL
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCEEEE
IDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIYAAVTPANVNDITAAKEMPIE
EECCCEEEECCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCC
AGATYVFDLGYYDFGWWAKLNAAGCRIVSRLKSHTKLTVSAEQAANADAGILFDRIGLLP
CCCEEEEECCCCCCCHHEECCHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHHHHHHCCCC
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVK
CHHHHHHCCCCCCCHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QTLKIRHFLGNSENAVRIQVAVALIAYLLLQMAKADQATVTSPLAFARLVRTNLMHRKRI
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DRLLKPRHSPPGNPGQMSLQW
HHHHCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MRHDNSVFHDVLKRIPWAVFERLVDEHQADKHVRRLSTKSQLIALLYGQLAGAVSLREIV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLESHSARLYHLGARPVSRSTFADANGLRPSTVFAELFAQMVARAGRGLKRAIGEAVYL
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHCCEEEE
IDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIYAAVTPANVNDITAAKEMPIE
EECCCEEEECCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCC
AGATYVFDLGYYDFGWWAKLNAAGCRIVSRLKSHTKLTVSAEQAANADAGILFDRIGLLP
CCCEEEEECCCCCCCHHEECCHHHHHHHHHHHHCCEEEEEHHHHCCCCHHHHHHHHCCCC
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVK
CHHHHHHCCCCCCCHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QTLKIRHFLGNSENAVRIQVAVALIAYLLLQMAKADQATVTSPLAFARLVRTNLMHRKRI
HHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
DRLLKPRHSPPGNPGQMSLQW
HHHHCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]