| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yiiP [C]
Identifier: 209550388
GI number: 209550388
Start: 2853996
End: 2854910
Strand: Reverse
Name: yiiP [C]
Synonym: Rleg2_2809
Alternate gene names: 209550388
Gene position: 2854910-2853996 (Counterclockwise)
Preceding gene: 209550389
Following gene: 209550387
Centisome position: 62.91
GC content: 63.83
Gene sequence:
>915_bases ATGAGTGACAACGGCGATCTTACGGTTCGGACGCTGGCGATGTGGGGCATTCCGCTGTCGCTCGGCGTCATGGGCCTGAA GATGGTGGCCTGGTGGGTCACCGGGTCGGTGGCGCTGCTGTCGGACGGGCTCGAATCGACGGTCAACGTCGTTGCCGCCT TCATCGCATTTTTCGTCATTCGCTATGCGCAGAAGCCGGCCGACCACGACCATCCCTTCGGCCATCACAAGGCGGAATAT CTGTCGGCGGTCACCGAGGGCGTGCTGATCGTCGTCGCCGCACTCCTGATCGTCAACGAGGCGATCGGTTACCTCGCCGC GCCGCGCATGCTCGATGCGCCGGTGCTCGGGCTTGCGATCAATTTCGCGGCCGGTGTCATCAATGCGGTCTGGGCGCGGC TGCTGATCCGAACTGGTCGCAAACATCGCTCGGCGGCGCTTGCCGCGGACGGGCAGCATATCCTGTCGGATGTGGTGACC TCCGTCGGCGTGCTCGCCGGCCTGCTGCTGGCGCTCGCGACCGGCTATGCGATCTTCGATCCGGTGCTCGCCATTCTGGT CGCCGTCAACATCATCTACCAGGGCTGGAAGGTGATCTCGCAATCGATCGGCGGACTGATGGACCAGGCCGTCGAACCGC GCGAGGAGGAAGCGATCAAGCGGGCGATCGCCACCCATGCGGCAGGCTCGATCGGCGTGCACGACCTGAAGACCAGGCGG GCCGGCGCCGTCACCTTCATCGATTTTCACATGGTGGTGCCCGGCACTATGTCGGTGCGGCAGGCGCATGATATATGCGA CCGCCTTGAGGATGCCATCAGTGCGGTGCACGAGGGCGCCAAAATAGCCATTCACGTGGAGCCCGAGGGCGAAAAGGCCC ATGGCATTCGCGTCAAAGTCGTCAAGGAGGCATGA
Upstream 100 bases:
>100_bases TATCACCCTTAACTGAACCGCCTTCGCGATAGTCGCGTGGGCGGTTTTGCATTTCAATGGCTTGGACCCTGCAATTCATT CGCAACCGCAGGAGGACGAT
Downstream 100 bases:
>100_bases TGCCGAATACCGATGTTTCCAGCCTGTCGATGCTGGGCCAGCAAACCGAAACCGCGCAGTCGCCGGAGCAGGCTGTGCTT GAAAAAGTGCCGTCCAACCA
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSDNGDLTVRTLAMWGIPLSLGVMGLKMVAWWVTGSVALLSDGLESTVNVVAAFIAFFVIRYAQKPADHDHPFGHHKAEY LSAVTEGVLIVVAALLIVNEAIGYLAAPRMLDAPVLGLAINFAAGVINAVWARLLIRTGRKHRSAALAADGQHILSDVVT SVGVLAGLLLALATGYAIFDPVLAILVAVNIIYQGWKVISQSIGGLMDQAVEPREEEAIKRAIATHAAGSIGVHDLKTRR AGAVTFIDFHMVVPGTMSVRQAHDICDRLEDAISAVHEGAKIAIHVEPEGEKAHGIRVKVVKEA
Sequences:
>Translated_304_residues MSDNGDLTVRTLAMWGIPLSLGVMGLKMVAWWVTGSVALLSDGLESTVNVVAAFIAFFVIRYAQKPADHDHPFGHHKAEY LSAVTEGVLIVVAALLIVNEAIGYLAAPRMLDAPVLGLAINFAAGVINAVWARLLIRTGRKHRSAALAADGQHILSDVVT SVGVLAGLLLALATGYAIFDPVLAILVAVNIIYQGWKVISQSIGGLMDQAVEPREEEAIKRAIATHAAGSIGVHDLKTRR AGAVTFIDFHMVVPGTMSVRQAHDICDRLEDAISAVHEGAKIAIHVEPEGEKAHGIRVKVVKEA >Mature_303_residues SDNGDLTVRTLAMWGIPLSLGVMGLKMVAWWVTGSVALLSDGLESTVNVVAAFIAFFVIRYAQKPADHDHPFGHHKAEYL SAVTEGVLIVVAALLIVNEAIGYLAAPRMLDAPVLGLAINFAAGVINAVWARLLIRTGRKHRSAALAADGQHILSDVVTS VGVLAGLLLALATGYAIFDPVLAILVAVNIIYQGWKVISQSIGGLMDQAVEPREEEAIKRAIATHAAGSIGVHDLKTRRA GAVTFIDFHMVVPGTMSVRQAHDICDRLEDAISAVHEGAKIAIHVEPEGEKAHGIRVKVVKEA
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=274, Percent_Identity=31.021897810219, Blast_Score=140, Evalue=8e-35, Organism=Escherichia coli, GI1786966, Length=247, Percent_Identity=25.9109311740891, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 32314; Mature: 32183
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNGDLTVRTLAMWGIPLSLGVMGLKMVAWWVTGSVALLSDGLESTVNVVAAFIAFFVI CCCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RYAQKPADHDHPFGHHKAEYLSAVTEGVLIVVAALLIVNEAIGYLAAPRMLDAPVLGLAI HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHH NFAAGVINAVWARLLIRTGRKHRSAALAADGQHILSDVVTSVGVLAGLLLALATGYAIFD HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH PVLAILVAVNIIYQGWKVISQSIGGLMDQAVEPREEEAIKRAIATHAAGSIGVHDLKTRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCC AGAVTFIDFHMVVPGTMSVRQAHDICDRLEDAISAVHEGAKIAIHVEPEGEKAHGIRVKV CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEE VKEA EECC >Mature Secondary Structure SDNGDLTVRTLAMWGIPLSLGVMGLKMVAWWVTGSVALLSDGLESTVNVVAAFIAFFVI CCCCCEEEEEHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH RYAQKPADHDHPFGHHKAEYLSAVTEGVLIVVAALLIVNEAIGYLAAPRMLDAPVLGLAI HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHH NFAAGVINAVWARLLIRTGRKHRSAALAADGQHILSDVVTSVGVLAGLLLALATGYAIFD HHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH PVLAILVAVNIIYQGWKVISQSIGGLMDQAVEPREEEAIKRAIATHAAGSIGVHDLKTRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCC AGAVTFIDFHMVVPGTMSVRQAHDICDRLEDAISAVHEGAKIAIHVEPEGEKAHGIRVKV CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEE VKEA EECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]