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The map label for this gene is clpS [H]

Identifier: 209550349

GI number: 209550349

Start: 2815003

End: 2815314

Strand: Reverse

Name: clpS [H]

Synonym: Rleg2_2770

Alternate gene names: 209550349

Gene position: 2815314-2815003 (Counterclockwise)

Preceding gene: 209550351

Following gene: 209550343

Centisome position: 62.04

GC content: 57.37

Gene sequence:

>312_bases
ATGAGTGACAATGACGTTGCCCTGAAACCGAAGACCAAGGTGAAGCCGAAGCTGGACAAGCCGAAGCTTTACAAGGTCAT
CCTCGTCAATGACGACTATACCCCGCGTGAGTTCGTCATAGTGATCCTGAAGGCCGTCTTCCGCATGAGCGAGGAGACCG
GCTATCGGGTGATGATGACCGCCCATAAGCTCGGCTCCTGCGTGGTCGTGGTCTGCGCCAGGGACATCGCCGAGACCAAG
GCCAAGGAGGGCATCGATCTCGCCAAGGAGATGGGCTTTCCGCTGATGTTCACGACAGAGCCGGAGGAATAG

Upstream 100 bases:

>100_bases
TGGAGGCAGGCAGCGACCGTGGACCGTCGAAAATTCGTCATCGACAATGATTAGTTGTTTTGAAGATTCCTGACCATGTC
ATCGACGGGTGGATTTTCCG

Downstream 100 bases:

>100_bases
GTTCTGCTTCAGAGCATGATGCCGAAAAGTGTGAGCGGTTTTCTCATGACATCCTGCTCTAGGGCCGGCGGATCTGAAAA
CCGGTCTTATCTCGCACGAA

Product: ATP-dependent Clp protease adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKAVFRMSEETGYRVMMTAHKLGSCVVVVCARDIAETK
AKEGIDLAKEMGFPLMFTTEPEE

Sequences:

>Translated_103_residues
MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKAVFRMSEETGYRVMMTAHKLGSCVVVVCARDIAETK
AKEGIDLAKEMGFPLMFTTEPEE
>Mature_102_residues
SDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKAVFRMSEETGYRVMMTAHKLGSCVVVVCARDIAETKA
KEGIDLAKEMGFPLMFTTEPEE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=88, Percent_Identity=42.0454545454545, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11652; Mature: 11521

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKAVFRMSEETGYRVMMT
CCCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
AHKLGSCVVVVCARDIAETKAKEGIDLAKEMGFPLMFTTEPEE
ECCCCCEEEEEEHHHHHHHHHHCCCHHHHHCCCCEEEEECCCC
>Mature Secondary Structure 
SDNDVALKPKTKVKPKLDKPKLYKVILVNDDYTPREFVIVILKAVFRMSEETGYRVMMT
CCCCEEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEE
AHKLGSCVVVVCARDIAETKAKEGIDLAKEMGFPLMFTTEPEE
ECCCCCEEEEEEHHHHHHHHHHCCCHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]